Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 7.2e-133 477.2 241 100.0
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 2.1e-76 289.7 251 62.5
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 5.8e-74 281.6 257 59.9
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 1.6e-68 263.5 249 60.6
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 1.8e-67 260.0 244 58.2
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 8.4e-65 251.1 237 57.0
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 8.4e-65 251.1 247 55.1
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.2e-64 249.2 251 55.8
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.2e-64 249.2 234 57.3
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 7.1e-64 248.1 255 56.9
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 1.2e-63 247.3 238 58.4
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.2e-63 247.3 192 65.6
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.6e-63 246.9 237 55.3
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 3.5e-63 245.7 255 51.8
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 3.5e-63 245.7 237 56.5
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.0e-63 245.0 251 55.4
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.0e-63 245.0 246 56.1
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 7.9e-63 244.6 237 55.3
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 1.0e-62 244.2 239 57.3
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 1.7e-62 243.4 201 63.2
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 1.7e-62 243.4 244 57.0
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 1.7e-62 243.4 242 53.7
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 3.9e-62 242.3 250 53.6
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 8.7e-62 241.1 239 54.8
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.1e-61 240.7 248 53.6
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 5.6e-61 238.4 217 58.5
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 9.6e-61 237.7 257 51.4
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.6e-60 236.9 239 55.2
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 1.6e-60 236.9 244 53.3
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.8e-60 236.1 205 59.5
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 3.6e-60 235.7 242 54.1
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 3.6e-60 235.7 248 52.4
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 3.6e-60 235.7 248 55.2
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 6.2e-60 235.0 212 58.0
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 6.2e-60 235.0 239 55.2
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 6.2e-60 235.0 205 60.0
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 8.1e-60 234.6 191 61.8
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 8.1e-60 234.6 246 54.9
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 8.1e-60 234.6 249 53.0
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.4e-59 233.8 202 60.9
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 1.8e-59 233.4 241 51.9
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 2.4e-59 233.0 241 53.1
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.0e-59 232.3 202 58.9
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 5.3e-59 231.9 202 57.4
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 5.3e-59 231.9 235 57.0
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 6.9e-59 231.5 203 59.1
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 9.0e-59 231.1 230 55.2
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 1.2e-58 230.7 245 51.4
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 2.6e-58 229.6 190 61.1
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 2.6e-58 229.6 244 52.5
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 3.4e-58 229.2 247 52.6
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 4.5e-58 228.8 243 52.7
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 5.8e-58 228.4 241 53.9
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 5.8e-58 228.4 247 51.8
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 9.9e-58 227.6 202 58.4
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 9.9e-58 227.6 227 53.7
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 1.3e-57 227.3 241 53.1
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 1.7e-57 226.9 233 53.2
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.7e-57 226.9 250 51.2
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 4.9e-57 225.3 242 50.8
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.4e-57 224.9 202 58.4
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 8.4e-57 224.6 246 49.2
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.1e-56 224.2 243 51.4
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.4e-56 223.8 241 53.1
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 3.2e-56 222.6 246 49.6
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 3.2e-56 222.6 245 53.5
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 7.1e-56 221.5 243 53.1
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 9.3e-56 221.1 250 50.8
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.6e-55 220.3 239 52.7
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 2.7e-55 219.5 193 58.5
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 4.6e-55 218.8 234 51.7
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 7.9e-55 218.0 205 55.1
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 3.0e-54 216.1 257 49.0
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 3.9e-54 215.7 239 51.5
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.1e-53 214.2 227 55.1
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 4.3e-53 212.2 242 51.7
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 4.8e-52 208.8 235 51.5
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 4.8e-52 208.8 235 51.5
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 6.2e-52 208.4 173 61.8
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 6.2e-52 208.4 198 54.0
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 6.2e-52 208.4 235 51.9
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 8.1e-52 208.0 235 51.5
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 1.1e-51 207.6 237 50.2
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 2.6e-50 203.0 146 69.9
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 4.5e-50 202.2 212 54.7
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 7.6e-50 201.4 191 55.0
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.3e-49 200.7 230 53.5
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 4.9e-49 198.7 235 52.3
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 8.4e-49 198.0 216 54.2
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 1.4e-48 197.2 183 55.7
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 2.5e-48 196.4 225 52.0
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 2.1e-47 193.4 215 52.1
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.5e-47 192.6 211 53.6
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 8.7e-46 188.0 197 50.8
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 1.6e-44 183.7 143 67.1
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.1e-43 179.5 183 49.2
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.8e-41 172.6 174 53.4
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 8.5e-41 171.4 198 44.9
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 3.2e-40 169.5 208 48.1
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 6.1e-39 165.2 180 47.8
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 3.9e-38 162.5 235 42.1
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.1e-37 161.0 181 45.9
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 6.9e-35 151.8 216 42.1
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 5.9e-34 148.7 213 41.8
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.2e-33 146.7 248 39.5
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.6e-31 140.6 207 37.7
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 5.3e-27 125.6 145 46.9
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 6.9e-27 125.2 144 50.7
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.9e-25 119.8 171 40.4
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 6.1e-23 112.1 87 62.1
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 3.9e-22 109.4 193 34.7
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 2.6e-18 96.7 111 46.8
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 6.1e-15 85.5 83 49.4
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 6.1e-15 85.5 93 41.9
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 2.0e-13 80.5 75 54.7
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 6.3e-12 75.5 68 57.4
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 2.7e-10 70.1 144 32.6


User provided reference genes

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