Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 6.9e-75 283.9 142 100.0
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 3.1e-51 205.3 136 72.1
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 5.3e-51 204.5 131 77.1
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 3.8e-49 198.4 153 67.3
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.9e-48 196.1 137 71.5
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.5e-48 195.7 141 68.8
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 5.5e-48 194.5 145 69.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 2.1e-47 192.6 122 74.6
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.7e-47 192.2 142 69.0
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.7e-47 192.2 121 75.2
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 3.6e-47 191.8 135 69.6
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.8e-46 189.5 133 70.7
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.8e-46 189.5 132 71.2
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.8e-46 189.5 132 71.2
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 1.8e-46 189.5 131 72.5
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 3.0e-46 188.7 131 71.0
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 5.1e-46 188.0 122 74.6
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 6.7e-46 187.6 129 70.5
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.1e-45 186.8 126 69.8
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 3.3e-45 185.3 125 71.2
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 4.4e-45 184.9 135 66.7
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 4.4e-45 184.9 141 63.1
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 5.7e-45 184.5 119 72.3
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 5.7e-45 184.5 131 69.5
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 7.4e-45 184.1 121 75.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 9.7e-45 183.7 121 71.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 9.7e-45 183.7 125 73.6
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 9.7e-45 183.7 129 65.9
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.8e-44 182.2 136 68.4
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 3.7e-44 181.8 121 71.1
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.1e-43 180.3 120 71.7
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 1.4e-43 179.9 154 58.4
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-43 179.9 127 69.3
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-43 179.5 137 66.4
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.8e-43 179.5 122 73.8
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.8e-43 179.5 138 63.0
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.4e-43 179.1 137 66.4
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.4e-43 179.1 131 69.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.1e-43 178.7 137 66.4
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 5.3e-43 177.9 141 61.7
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 6.9e-43 177.6 119 72.3
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.1e-43 177.2 119 70.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 9.1e-43 177.2 143 62.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-42 176.4 137 65.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.0e-42 176.0 142 64.1
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 2.6e-42 175.6 121 72.7
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 4.5e-42 174.9 138 65.2
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.5e-42 174.9 140 66.4
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.5e-42 174.9 121 74.4
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.9e-42 174.5 131 66.4
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 7.7e-42 174.1 143 62.2
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.3e-41 173.3 131 66.4
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 2.2e-41 172.6 120 68.3
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.8e-41 171.8 137 65.0
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 5.0e-41 171.4 125 68.0
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 5.0e-41 171.4 122 70.5
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 6.5e-41 171.0 134 65.7
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 2.5e-40 169.1 119 64.7
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 3.2e-40 168.7 121 66.1
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 3.2e-40 168.7 122 63.1
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.2e-40 168.3 131 65.6
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 5.5e-40 167.9 146 56.2
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 9.4e-40 167.2 131 64.9
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 9.4e-40 167.2 128 68.0
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.2e-39 166.8 166 53.6
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 2.1e-39 166.0 121 64.5
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.7e-39 165.6 132 61.4
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 3.6e-39 165.2 136 61.8
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 6.1e-39 164.5 135 61.5
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 6.1e-39 164.5 120 65.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 6.1e-39 164.5 122 66.4
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 7.9e-39 164.1 131 62.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.9e-39 164.1 137 63.5
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 1.0e-38 163.7 139 63.3
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.4e-38 163.3 146 56.2
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 1.8e-38 162.9 141 58.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 2.3e-38 162.5 133 60.2
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.0e-38 162.2 141 57.4
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 3.0e-38 162.2 138 60.9
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 8.8e-38 160.6 125 60.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 8.8e-38 160.6 131 62.6
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-37 160.2 126 61.9
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.6e-37 159.1 131 61.1
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.8e-36 155.6 121 62.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 3.7e-36 155.2 149 52.3
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 4.8e-36 154.8 121 62.0
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 4.8e-36 154.8 121 62.0
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 6.3e-36 154.5 121 62.0
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 8.2e-36 154.1 131 58.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.4e-35 153.3 122 63.9
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 2.4e-35 152.5 122 63.9
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 3.1e-35 152.1 121 64.5
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 5.3e-35 151.4 121 63.6
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 7.0e-35 151.0 121 62.0
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 9.1e-35 150.6 121 61.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 9.1e-35 150.6 121 61.2
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.0
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 2.0e-34 149.4 121 62.0
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.0e-33 147.1 120 61.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.8e-33 145.2 120 60.8
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.1e-32 143.7 127 57.5
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 8.8e-30 134.0 120 58.3
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 2.8e-28 129.0 85 70.6
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 9.1e-27 124.0 149 49.0
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 2.9e-25 119.0 123 51.2
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 2.5e-24 115.9 142 45.1
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 3.2e-24 115.5 137 47.4
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.2e-24 114.4 71 71.8
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.8e-20 102.4 57 78.9
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.9e-16 89.7 81 59.3
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.9e-16 89.7 146 37.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 1.4e-14 83.6 118 40.7
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 6.8e-14 81.3 118 44.1
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 8.9e-14 80.9 50 70.0
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 9.2e-11 70.9 75 52.0


User provided reference genes

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