Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 5.7e-242 840.5 428 100.0
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 1.8e-174 616.3 426 73.9
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 7.4e-165 584.3 430 70.7
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 2.0e-157 559.7 407 70.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.6e-146 523.5 433 61.4
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.8e-142 510.0 445 61.8
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.5e-141 506.9 433 60.5
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.7e-140 503.4 433 60.3
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.8e-140 502.7 433 61.0
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 1.4e-139 500.4 414 63.8
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 2.0e-138 496.5 422 62.1
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 4.5e-138 495.4 422 63.0
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 5.9e-138 495.0 422 61.4
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 1.3e-137 493.8 433 59.1
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 1.3e-137 493.8 427 59.3
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.7e-137 493.4 425 58.6
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.7e-137 493.4 453 57.0
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.1e-136 490.7 411 63.3
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 1.2e-135 487.3 431 57.8
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 2.8e-135 486.1 416 62.0
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 1.0e-134 484.2 432 57.6
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.4e-134 483.8 425 58.8
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.5e-133 480.3 436 57.6
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 1.5e-133 480.3 437 57.0
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 7.5e-133 478.0 412 61.9
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 2.8e-132 476.1 422 58.1
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 1.4e-131 473.8 425 57.4
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 4.1e-131 472.2 420 58.1
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 5.4e-131 471.9 428 56.8
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 9.2e-131 471.1 437 57.7
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 3.9e-129 465.7 433 58.0
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 2.5e-128 463.0 416 57.9
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 3.3e-128 462.6 408 57.4
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.6e-127 460.3 422 56.2
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 8.0e-127 458.0 430 56.3
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.4e-126 457.2 430 57.2
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.8e-126 456.8 418 57.9
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 4.0e-126 455.7 419 56.6
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.0e-126 455.7 428 56.1
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 4.0e-126 455.7 417 56.4
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 6.8e-126 454.9 433 55.2
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 8.9e-126 454.5 428 56.1
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 8.9e-126 454.5 450 54.9
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.5e-125 453.8 422 56.4
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.5e-125 453.8 419 56.6
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 2.6e-125 453.0 418 55.7
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 4.4e-125 452.2 427 55.7
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 7.5e-125 451.4 419 55.8
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.3e-124 450.7 427 55.7
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.7e-124 450.3 430 55.3
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.9e-124 449.5 432 54.6
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 8.3e-124 448.0 438 54.8
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 8.3e-124 448.0 427 56.2
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 1.1e-123 447.6 415 55.7
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 4.1e-123 445.7 479 50.3
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.6e-122 443.7 423 55.1
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 1.6e-122 443.7 427 55.5
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.0e-121 441.0 410 55.6
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.3e-121 440.7 419 54.7
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 1.7e-121 440.3 419 54.7
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 2.3e-121 439.9 419 55.4
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 3.9e-121 439.1 421 55.3
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 3.9e-121 439.1 369 61.0
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 8.6e-121 438.0 424 55.2
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 8.6e-121 438.0 424 53.5
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.6e-119 433.7 419 54.9
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.8e-119 433.0 420 53.8
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.1e-118 431.0 408 55.9
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.8e-118 430.3 473 51.0
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 2.3e-118 429.9 423 53.2
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 3.1e-118 429.5 426 53.1
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 3.1e-118 429.5 431 54.8
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 6.8e-118 428.3 419 54.2
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 6.8e-118 428.3 426 52.8
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 6.8e-118 428.3 424 53.5
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 4.4e-117 425.6 309 67.6
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 5.8e-117 425.2 423 53.0
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 7.5e-117 424.9 431 53.1
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 1.7e-116 423.7 430 52.1
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 6.4e-116 421.8 420 53.1
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 2.4e-115 419.9 419 53.7
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 4.1e-115 419.1 442 52.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 4.6e-114 415.6 419 54.7
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.7e-113 413.7 422 54.3
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 5.6e-112 408.7 376 56.9
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 3.1e-110 402.9 427 51.3
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 4.4e-109 399.1 427 51.3
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.3e-108 397.5 430 52.1
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 8.3e-108 394.8 417 51.8
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 2.7e-106 389.8 425 51.5
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 2.7e-106 389.8 432 50.7
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 6.0e-106 388.7 414 49.0
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 1.6e-103 380.6 357 56.0
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.5e-101 374.0 285 62.8
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 4.3e-96 355.9 441 48.1
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.6e-95 354.0 420 46.4
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 4.4e-93 345.9 419 46.8
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 2.5e-88 330.1 346 50.9
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 2.6e-85 320.1 435 40.0
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.3e-84 317.8 319 54.2
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 1.3e-71 274.6 217 67.7
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 1.6e-66 257.7 424 39.6
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 2.2e-55 220.7 260 47.7
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 5.0e-52 209.5 219 49.8
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 1.8e-49 201.1 392 37.2
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.8e-49 201.1 279 43.0
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 5.1e-49 199.5 146 65.1
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 7.4e-48 195.7 393 31.0
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.3e-47 194.9 354 33.3
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 1.7e-47 194.5 346 36.7
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 8.2e-47 192.2 140 67.1
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 2.6e-45 187.2 139 62.6
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.8e-39 167.2 306 34.0
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.6e-37 161.4 139 54.0
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 4.2e-35 153.3 139 56.1
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 5.5e-35 152.9 160 53.1
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 1.4e-33 148.3 154 50.0
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.0e-24 117.9 280 28.2
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 3.4e-16 90.5 104 48.1
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 5.7e-16 89.7 60 70.0
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 4.6e-13 80.1 101 44.6
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 2.1e-10 71.2 253 19.4
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 1.5e-08 65.1 170 25.9


User provided reference genes

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