Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01030 Striga asiatica HOM05D004596 ORTHO05D005853 6.0e-88 327.4 158 100.0
SGA_v2.0_scaffold79G25602 Striga asiatica HOM05D004596 ORTHO05D005853 4.4e-54 214.9 147 76.9
Migut.N00215 Erythranthe guttata HOM05D004596 ORTHO05D005853 4.9e-29 131.7 121 56.2
Oeu064241.3 Olea europaea HOM05D004596 ORTHO05D005853 2.0e-27 126.3 121 55.4
MSTRG.4066 Avicennia marina HOM05D004596 ORTHO05D005853 2.8e-24 115.9 116 56.0
Nitab4.5_0002652g0030 Nicotiana tabacum HOM05D004596 ORTHO05D005853 1.4e-23 113.6 75 73.3
ClCG05G004810 Citrullus lanatus HOM05D004596 ORTHO05D005853 1.8e-23 113.2 100 54.0
CSS0040136 Camellia sinensis var. sinensis HOM05D004596 ORTHO05D005853 2.3e-23 112.8 141 46.1
Hma1.2p1_0549F.1_g177070 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.1e-23 112.5 129 48.8
Hma1.2p1_0549F.1_g177080 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.1e-23 112.5 129 48.8
Hma1.2p1_1311F.1_g274870 Hydrangea macrophylla HOM05D004596 ORTHO05D005853 3.1e-23 112.5 129 48.8
Actinidia40113 Actinidia chinensis HOM05D004596 ORTHO05D005853 5.2e-23 111.7 121 50.4
Dinv44581 Davidia involucrata HOM05D004596 ORTHO05D005853 5.2e-23 111.7 130 50.0
MELO3C006495.2 Cucumis melo HOM05D004596 ORTHO05D005853 8.9e-23 110.9 100 52.0
Actinidia04506 Actinidia chinensis HOM05D004596 ORTHO05D005853 1.2e-22 110.5 121 49.6
Sopen09g031650 Solanum pennellii HOM05D004596 ORTHO05D005853 1.2e-22 110.5 113 57.5
PGSC0003DMG400030169 Solanum tuberosum HOM05D004596 ORTHO05D005853 3.4e-22 109.0 113 56.6
Lsat_1_v5_gn_5_103320 Lactuca sativa HOM05D004596 ORTHO05D005853 4.4e-22 108.6 114 50.0
CsaV3_3G012850 Cucumis sativus L. HOM05D004596 ORTHO05D005853 5.8e-22 108.2 100 51.0
GSVIVG01018052001 Vitis vinifera HOM05D004596 ORTHO05D005853 5.8e-22 108.2 128 49.2
Nitab4.5_0000224g0010 Nicotiana tabacum HOM05D004596 ORTHO05D005853 7.5e-22 107.8 111 56.8
Sabra08G0120900 Salix brachista HOM05D004596 ORTHO05D005853 7.5e-22 107.8 72 69.4
Solyc09g082800.3 Solanum lycopersicum HOM05D004596 ORTHO05D005853 7.5e-22 107.8 113 56.6
Peaxi162Scf00316g00026 Petunia axillaris HOM05D004596 ORTHO05D005853 9.8e-22 107.5 75 69.3
vmacro08381 Vaccinium macrocarpon HOM05D004596 ORTHO05D005853 9.8e-22 107.5 121 49.6
Rhsim04G0196700 Rhododendron simsii HOM05D004596 ORTHO05D005853 2.2e-21 106.3 129 47.3
Manes.15G033300 Manihot esculenta HOM05D004596 ORTHO05D005853 2.9e-21 105.9 102 54.9
Cfa008428 Carpinus fangiana HOM05D004596 ORTHO05D005853 4.9e-21 105.1 102 53.9
Potri.008G158600 Populus trichocarpa HOM05D004596 ORTHO05D005853 4.9e-21 105.1 72 66.7
CAN.G1435.8 Capsicum annuum HOM05D004596 ORTHO05D005853 6.4e-21 104.8 101 58.4
Gohir.D10G149100 Gossypium hirsutum HOM05D004596 ORTHO05D005853 6.4e-21 104.8 123 50.4
Haze_11239 Corylus avellana HOM05D004596 ORTHO05D005853 8.3e-21 104.4 102 52.9
Gohir.A10G117700 Gossypium hirsutum HOM05D004596 ORTHO05D005853 1.9e-20 103.2 117 49.6
QL06p000822 Quercus lobata HOM05D004596 ORTHO05D005853 1.9e-20 103.2 102 52.9
Gorai.011G166400 Gossypium raimondii HOM05D004596 ORTHO05D005853 2.4e-20 102.8 123 49.6
Sabra10G0061500 Salix brachista HOM05D004596 ORTHO05D005853 4.1e-20 102.1 100 55.0
Thecc.04G239700 Theobroma cacao HOM05D004596 ORTHO05D005853 4.1e-20 102.1 117 49.6
Lj5g0008006 Lotus japonicus HOM05D004596 ORTHO05D005853 5.4e-20 101.7 122 45.9
Psat7g206760 Pisum sativum HOM05D004596 ORTHO05D005853 5.4e-20 101.7 126 47.6
Potri.010G081400 Populus trichocarpa HOM05D004596 ORTHO05D005853 1.6e-19 100.1 95 54.7
Sed0001129 Sechium edule HOM05D004596 ORTHO05D005853 1.6e-19 100.1 122 44.3
Duzib151G0659 Durio zibethinus HOM05D004596 ORTHO05D005853 2.0e-19 99.8 122 50.8
Medtr4g068740 Medicago truncatula HOM05D004596 ORTHO05D005853 2.0e-19 99.8 122 50.0
TAR362G0583 Trochodendron aralioides HOM05D004596 ORTHO05D005853 2.0e-19 99.8 112 50.0
EL10Ac3g06528 Beta vulgaris HOM05D004596 ORTHO05D005853 2.7e-19 99.4 105 49.5
arahy.Tifrunner.gnm1.ann1.B8VWLB Arachis hypogaea HOM05D004596 ORTHO05D005853 3.5e-19 99.0 71 63.4
Lalb_Chr02g0140731 Lupinus albus HOM05D004596 ORTHO05D005853 1.0e-18 97.4 122 46.7
COL.COLO4_21575 Corchorus olitorius HOM05D004596 ORTHO05D005853 1.3e-18 97.1 95 53.7
Glyma.10G243000 Glycine max HOM05D004596 ORTHO05D005853 1.3e-18 97.1 73 63.0
Glyma.20G151300 Glycine max HOM05D004596 ORTHO05D005853 1.7e-18 96.7 124 46.0
TPR.G29898 Trifolium pratense HOM05D004596 ORTHO05D005853 1.7e-18 96.7 127 47.2
Cpa.g.sc44.129 Carica papaya HOM05D004596 ORTHO05D005853 2.3e-18 96.3 111 50.5
DCAR_024187 Daucus carota HOM05D004596 ORTHO05D005853 2.3e-18 96.3 98 51.0
Cc03_g04360 Coffea canephora HOM05D004596 ORTHO05D005853 3.0e-18 95.9 118 45.8
Aqoxy2G03471 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 3.9e-18 95.5 98 50.0
PGR142G3885 Punica granatum HOM05D004596 ORTHO05D005853 3.9e-18 95.5 99 48.5
Phvul.007G062700 Phaseolus vulgaris HOM05D004596 ORTHO05D005853 5.0e-18 95.1 72 62.5
CANSAT78G0708 Cannabis sativa HOM05D004596 ORTHO05D005853 6.6e-18 94.7 99 50.5
Ca_20830_v3 Cicer arietinum L. HOM05D004596 ORTHO05D005853 6.6e-18 94.7 116 50.0
TAR633G0587 Trochodendron aralioides HOM05D004596 ORTHO05D005853 8.6e-18 94.4 112 49.1
C05p02420 Brassica napus HOM05D004596 ORTHO05D005853 1.5e-17 93.6 119 43.7
BraA10t42531Z Brassica rapa HOM05D004596 ORTHO05D005853 1.5e-17 93.6 119 43.7
AUR62042985 Chenopodium quinoa HOM05D004596 ORTHO05D005853 1.5e-17 93.6 106 50.9
A10p02640 Brassica napus HOM05D004596 ORTHO05D005853 1.9e-17 93.2 119 44.5
AUR62038647 Chenopodium quinoa HOM05D004596 ORTHO05D005853 1.9e-17 93.2 106 50.0
Eucgr.B00983 Eucalyptus grandis HOM05D004596 ORTHO05D005853 1.9e-17 93.2 100 49.0
HanXRQChr10g0294771 Helianthus annuus HOM05D004596 ORTHO05D005853 2.5e-17 92.8 69 56.5
arahy.Tifrunner.gnm1.ann1.0IB5VB Arachis hypogaea HOM05D004596 ORTHO05D005853 3.3e-17 92.4 100 53.0
BolC5t29021H Brassica oleracea HOM05D004596 ORTHO05D005853 3.3e-17 92.4 117 41.9
ATR0665G133 Amborella trichopoda HOM05D004596 ORTHO05D005853 5.6e-17 91.7 70 58.6
Nn6g34173 Nelumbo nucifera HOM05D004596 ORTHO05D005853 5.6e-17 91.7 65 66.2
Atru.chr4.2330 Acer truncatum HOM05D004596 ORTHO05D005853 9.5e-17 90.9 116 47.4
Ciclev10004189m.g Citrus clementina HOM05D004596 ORTHO05D005853 9.5e-17 90.9 126 46.0
Sc13g0004790 Simmondsia chinensis HOM05D004596 ORTHO05D005853 9.5e-17 90.9 115 48.7
CiPaw.01G194700 Carya illinoinensis HOM05D004596 ORTHO05D005853 1.2e-16 90.5 115 48.7
PSO210G2132 Papaver somniferum HOM05D004596 ORTHO05D005853 1.2e-16 90.5 108 45.4
PSO461G0024 Papaver somniferum HOM05D004596 ORTHO05D005853 1.2e-16 90.5 108 45.4
MBI11_g37065_MAGBIO Magnolia biondii HOM05D004596 ORTHO05D005853 1.6e-16 90.1 99 47.5
VMungo0720G1744 Vigna mungo HOM05D004596 ORTHO05D005853 2.1e-16 89.7 125 48.8
Hund20642 Selenicereus undatus HOM05D004596 ORTHO05D005853 3.6e-16 89.0 114 45.6
THA.LOC104826066 Tarenaya hassleriana HOM05D004596 ORTHO05D005853 3.6e-16 89.0 103 48.5
Zm00001eb056920 Zea mays HOM05D004596 ORTHO05D005853 4.7e-16 88.6 94 53.2
Sp1g03030 Schrenkiella parvula HOM05D004596 ORTHO05D005853 6.2e-16 88.2 114 46.5
Carub.0001s0340 Capsella rubella HOM05D004596 ORTHO05D005853 1.1e-15 87.4 122 41.8
Ah.13g071800 Amaranthus hybridus HOM05D004596 ORTHO05D005853 1.8e-15 86.7 106 45.3
Aa31LG1G20620 Aethionema arabicum HOM05D004596 ORTHO05D005853 2.3e-15 86.3 124 41.9
BcaC07g42199 Brassica carinata HOM05D004596 ORTHO05D005853 2.3e-15 86.3 124 41.1
TWI73G0280 Tripterygium wilfordii HOM05D004596 ORTHO05D005853 2.3e-15 86.3 115 47.8
HPP92_023540 Vanilla planifolia HOM05D004596 ORTHO05D005853 3.1e-15 85.9 114 46.5
Thhalv10006614m.g Eutrema salsugineum HOM05D004596 ORTHO05D005853 6.8e-15 84.7 120 42.5
C08p52390 Brassica napus HOM05D004596 ORTHO05D005853 1.2e-14 84.0 117 43.6
BolC8t52768H Brassica oleracea HOM05D004596 ORTHO05D005853 1.2e-14 84.0 117 43.6
A09p67970 Brassica napus HOM05D004596 ORTHO05D005853 2.0e-14 83.2 111 40.5
BraA09t42132Z Brassica rapa HOM05D004596 ORTHO05D005853 2.0e-14 83.2 111 40.5
AL1G13810 Arabidopsis lyrata HOM05D004596 ORTHO05D005853 3.4e-14 82.4 116 43.1
BcaC05g24461 Brassica carinata HOM05D004596 ORTHO05D005853 3.4e-14 82.4 67 56.7
CARHR003540 Cardamine hirsuta HOM05D004596 ORTHO05D005853 5.8e-14 81.6 117 41.0
Aqoxy7G01427 Aquilegia oxysepala HOM05D004596 ORTHO05D005853 3.7e-13 79.0 125 40.0
AT1G04210 Arabidopsis thaliana HOM05D004596 ORTHO05D005853 3.7e-13 79.0 94 46.8
FAN17G0661 Fragaria x ananassa HOM05D004596 ORTHO05D005853 4.9e-13 78.6 113 43.4
MD13G1201100 Malus domestica HOM05D004596 ORTHO05D005853 4.9e-13 78.6 118 42.4
FAN22G0929 Fragaria x ananassa HOM05D004596 ORTHO05D005853 8.3e-13 77.8 93 48.4
MD16G1200600 Malus domestica HOM05D004596 ORTHO05D005853 1.1e-12 77.4 71 50.7
Prupe.1G022600 Prunus persica HOM05D004596 ORTHO05D005853 1.1e-12 77.4 103 47.6
RcHm_v2.0_Chr4g0388191 Rosa chinensis HOM05D004596 ORTHO05D005853 1.4e-12 77.0 108 47.2
SEGI_05896 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 1.9e-12 76.6 75 49.3
CDE06G0929 Ceratophyllum demersum HOM05D004596 ORTHO05D005853 3.2e-12 75.9 116 44.0
RcHm_v2.0_Chr4g0437941 Rosa chinensis HOM05D004596 ORTHO05D005853 7.1e-12 74.7 57 57.9
Thecc.08G085900 Theobroma cacao HOM05D004596 ORTHO05D005853 7.1e-12 74.7 128 38.3
ECA234G3873 Erigeron canadensis HOM05D004596 ORTHO05D005853 1.2e-11 73.9 90 45.6
SEGI_35525 Sequoiadendron giganteum HOM05D004596 ORTHO05D005853 1.6e-11 73.6 89 44.9
FvH4_4g01620 Fragaria vesca HOM05D004596 ORTHO05D005853 2.7e-11 72.8 107 42.1
FAN12G2122 Fragaria x ananassa HOM05D004596 ORTHO05D005853 2.7e-11 72.8 107 42.1
Pp3c8_22390 Physcomitrium patens HOM05D004596 ORTHO05D005853 3.5e-11 72.4 116 41.4
SMO118G0545 Selaginella moellendorffii HOM05D004596 ORTHO05D005853 3.5e-11 72.4 69 50.7
FAN17G0232 Fragaria x ananassa HOM05D004596 ORTHO05D005853 1.0e-10 70.9 59 52.5
FAN07G2222 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.0e-10 69.3 59 50.8
FAN22G1518 Fragaria x ananassa HOM05D004596 ORTHO05D005853 3.0e-10 69.3 59 50.8
FvH4_4g29700 Fragaria vesca HOM05D004596 ORTHO05D005853 5.1e-10 68.6 62 50.0
FAN12G3612 Fragaria x ananassa HOM05D004596 ORTHO05D005853 5.1e-10 68.6 62 50.0
Mapoly0005s0269 Marchantia polymorpha HOM05D004596 ORTHO05D005853 8.6e-10 67.8 76 47.4


User provided reference genes

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