Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 1.5e-62 242.7 120 100.0
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 7.2e-49 197.2 120 76.7
SGA_v2.0_scaffold221G42666 Striga asiatica HOM05D005580 ORTHO05D006395 9.4e-49 196.8 108 87.0
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 2.1e-48 195.7 120 75.8
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 3.0e-47 191.8 120 74.2
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 3.9e-47 191.4 120 72.5
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 6.7e-47 190.7 120 73.3
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 6.7e-47 190.7 120 74.2
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 1.5e-46 189.5 120 72.5
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 2.5e-46 188.7 120 71.7
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 3.3e-46 188.3 120 72.5
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 4.3e-46 188.0 120 70.8
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 5.7e-46 187.6 123 71.5
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 5.7e-46 187.6 120 70.8
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 7.4e-46 187.2 120 71.7
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 9.7e-46 186.8 120 72.5
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 9.7e-46 186.8 120 70.8
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 9.7e-46 186.8 120 70.8
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 9.7e-46 186.8 121 72.7
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 1.3e-45 186.4 120 70.0
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 1.7e-45 186.0 120 70.8
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 2.8e-45 185.3 119 71.4
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 2.8e-45 185.3 121 72.7
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 2.8e-45 185.3 121 72.7
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 2.8e-45 185.3 120 70.0
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 3.7e-45 184.9 120 70.0
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 4.8e-45 184.5 120 69.2
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 4.8e-45 184.5 114 74.6
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 4.8e-45 184.5 120 71.7
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 6.3e-45 184.1 121 71.9
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 6.3e-45 184.1 120 70.8
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 8.2e-45 183.7 128 68.8
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 8.2e-45 183.7 120 70.0
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 1.1e-44 183.3 120 68.3
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 1.4e-44 183.0 124 71.0
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 1.4e-44 183.0 124 71.0
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 1.4e-44 183.0 123 71.5
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.4e-44 183.0 121 71.9
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 1.8e-44 182.6 123 71.5
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 1.8e-44 182.6 120 70.0
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 1.8e-44 182.6 121 71.1
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 2.4e-44 182.2 120 69.2
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 3.1e-44 181.8 123 73.2
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 4.1e-44 181.4 120 69.2
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 4.1e-44 181.4 121 71.1
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 4.1e-44 181.4 121 73.6
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 6.9e-44 180.6 120 67.5
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 6.9e-44 180.6 120 67.5
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 6.9e-44 180.6 122 71.3
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 6.9e-44 180.6 120 68.3
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 6.9e-44 180.6 121 71.1
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 6.9e-44 180.6 120 69.2
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 9.1e-44 180.3 118 69.5
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 70.2
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 9.1e-44 180.3 120 67.5
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 9.1e-44 180.3 121 69.4
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 1.2e-43 179.9 120 67.5
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 1.5e-43 179.5 126 69.0
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 2.0e-43 179.1 123 69.1
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 3.4e-43 178.3 122 69.7
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 4.5e-43 177.9 120 66.7
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 7.7e-43 177.2 119 70.6
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 1.0e-42 176.8 115 71.3
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 1.0e-42 176.8 115 71.3
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 1.0e-42 176.8 127 67.7
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 1.0e-42 176.8 123 69.1
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 2.2e-42 175.6 121 69.4
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 2.2e-42 175.6 120 69.2
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 2.9e-42 175.3 121 68.6
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 2.9e-42 175.3 123 67.5
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 3.8e-42 174.9 122 68.9
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 3.8e-42 174.9 122 68.9
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 3.8e-42 174.9 120 69.2
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 5.0e-42 174.5 123 66.7
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 5.0e-42 174.5 123 67.5
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 5.0e-42 174.5 123 67.5
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 5.0e-42 174.5 120 67.5
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 6.5e-42 174.1 125 68.0
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 6.5e-42 174.1 120 64.2
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 8.5e-42 173.7 125 65.6
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 1.9e-41 172.6 131 62.6
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 3.2e-41 171.8 122 64.8
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 4.2e-41 171.4 120 65.8
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 5.5e-41 171.0 127 63.8
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 5.5e-41 171.0 121 64.5
Migut.F01495 Erythranthe guttata HOM05D005580 ORTHO05D006395 7.2e-41 170.6 101 75.2
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 1.2e-40 169.9 112 68.8
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 3.6e-40 168.3 128 61.7
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 1.4e-39 166.4 121 64.5
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 1.4e-39 166.4 121 64.5
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 1.4e-39 166.4 116 69.8
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 1.8e-39 166.0 126 66.7
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 5.1e-39 164.5 126 65.1
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 5.1e-39 164.5 126 65.1
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 6.7e-39 164.1 126 65.1
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 6.7e-39 164.1 126 65.1
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 6.7e-39 164.1 126 64.3
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 6.7e-39 164.1 126 65.1
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 8.8e-39 163.7 126 65.1
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 8.8e-39 163.7 126 64.3
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 8.8e-39 163.7 124 62.9
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 1.1e-38 163.3 126 64.3
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 1.1e-38 163.3 126 64.3
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 1.5e-38 162.9 126 66.7
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 1.5e-38 162.9 123 63.4
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 2.6e-38 162.2 126 63.5
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 3.3e-38 161.8 126 65.1
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 3.3e-38 161.8 126 64.3
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 4.4e-38 161.4 111 65.8
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 9.7e-38 160.2 127 63.8
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 9.7e-38 160.2 109 67.0
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 9.7e-38 160.2 123 61.0
Oeu048246.1 Olea europaea HOM05D005580 ORTHO05D006395 1.3e-37 159.8 104 73.1
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 1.7e-37 159.5 127 63.8
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 1.7e-37 159.5 120 65.8
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 4.8e-37 157.9 113 64.6
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 6.3e-37 157.5 113 64.6
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 6.3e-37 157.5 120 65.0
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 8.2e-37 157.1 122 59.8
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 1.1e-36 156.8 115 68.7
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 1.1e-36 156.8 112 64.3
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 9.1e-36 153.7 127 57.5
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 6.5e-34 147.5 129 58.9
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 4.2e-33 144.8 113 56.6
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 2.7e-32 142.1 120 62.5
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 3.3e-30 135.2 86 69.8
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 1.7e-26 122.9 101 57.4
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.8e-23 112.8 86 64.0
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 6.7e-23 110.9 86 62.8
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 2.7e-19 99.0 120 49.2
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 1.6e-16 89.7 59 67.8
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 2.0e-14 82.8 60 63.3
CDE08G0377 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 2.4e-12 75.9 120 35.0
Aqoxy4G02929 Aquilegia oxysepala HOM05D005580 ORTHO05D006395 1.2e-06 57.0 38 60.5


User provided reference genes

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