Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G01002 Striga asiatica HOM05D005838 ORTHO05D007177 7.8e-115 417.2 212 100.0
MSTRG.287 Avicennia marina HOM05D005838 ORTHO05D007177 1.9e-108 396.0 212 93.4
Oeu064376.1 Olea europaea HOM05D005838 ORTHO05D007177 1.6e-104 382.9 212 90.1
Migut.M01657 Erythranthe guttata HOM05D005838 ORTHO05D007177 2.2e-101 372.5 213 90.1
Cc02_g07820 Coffea canephora HOM05D005838 ORTHO05D007177 1.7e-98 362.8 212 85.4
Dinv03043 Davidia involucrata HOM05D005838 ORTHO05D007177 1.1e-92 343.6 210 82.4
Lj8A84T88 Lonicera japonica HOM05D005838 ORTHO05D007177 5.4e-92 341.3 206 83.5
Solyc05g054430.4 Solanum lycopersicum HOM05D005838 ORTHO05D007177 7.1e-92 340.9 202 84.7
Sopen05g032920 Solanum pennellii HOM05D005838 ORTHO05D007177 7.1e-92 340.9 202 84.7
PGSC0003DMG402023533 Solanum tuberosum HOM05D005838 ORTHO05D007177 7.1e-92 340.9 202 84.7
CAN.G1013.29 Capsicum annuum HOM05D005838 ORTHO05D007177 2.7e-91 339.0 202 85.1
Dinv26018 Davidia involucrata HOM05D005838 ORTHO05D007177 8.7e-90 334.0 210 81.0
Nitab4.5_0008565g0020 Nicotiana tabacum HOM05D005838 ORTHO05D007177 6.9e-87 324.3 236 72.9
Hma1.2p1_0405F.1_g145680 Hydrangea macrophylla HOM05D005838 ORTHO05D007177 2.6e-86 322.4 213 78.4
CSS0040522 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 5.8e-86 321.2 210 79.0
AUR62012091 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.2e-85 319.3 206 76.7
AUR62039375 Chenopodium quinoa HOM05D005838 ORTHO05D007177 2.9e-85 318.9 206 76.2
Peaxi162Scf00886g00023 Petunia axillaris HOM05D005838 ORTHO05D007177 1.2e-83 313.5 199 81.4
Sc11g0007930 Simmondsia chinensis HOM05D005838 ORTHO05D007177 1.7e-82 309.7 213 73.7
Nitab4.5_0025932g0010 Nicotiana tabacum HOM05D005838 ORTHO05D007177 2.5e-81 305.8 209 76.6
vmacro10230 Vaccinium macrocarpon HOM05D005838 ORTHO05D007177 4.3e-81 305.1 206 76.2
HanXRQChr17g0562051 Helianthus annuus HOM05D005838 ORTHO05D007177 9.6e-81 303.9 210 71.9
Nn1g07214 Nelumbo nucifera HOM05D005838 ORTHO05D007177 9.6e-81 303.9 213 72.3
HPP92_027375 Vanilla planifolia HOM05D005838 ORTHO05D007177 1.6e-80 303.1 213 73.7
Lsat_1_v5_gn_1_78580 Lactuca sativa HOM05D005838 ORTHO05D007177 2.8e-80 302.4 211 73.0
EL10Ac2g04744 Beta vulgaris HOM05D005838 ORTHO05D007177 2.4e-79 299.3 228 68.0
GSVIVG01024370001 Vitis vinifera HOM05D005838 ORTHO05D007177 2.4e-79 299.3 207 73.4
Rhsim09G0166200 Rhododendron simsii HOM05D005838 ORTHO05D007177 1.2e-78 297.0 206 74.3
QL08p059697 Quercus lobata HOM05D005838 ORTHO05D007177 1.5e-78 296.6 210 68.6
Aqoxy6G01179 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 2.0e-78 296.2 213 70.0
Hund16085 Selenicereus undatus HOM05D005838 ORTHO05D007177 2.0e-78 296.2 213 71.4
CiPaw.01G287700 Carya illinoinensis HOM05D005838 ORTHO05D007177 2.6e-78 295.8 210 68.6
Aqoxy3G02271 Aquilegia oxysepala HOM05D005838 ORTHO05D007177 5.8e-78 294.7 213 69.5
CDE04G0192 Ceratophyllum demersum HOM05D005838 ORTHO05D007177 2.9e-77 292.4 213 69.5
DCAR_011703 Daucus carota HOM05D005838 ORTHO05D007177 3.8e-77 292.0 182 79.7
Haze_17070 Corylus avellana HOM05D005838 ORTHO05D007177 5.4e-76 288.1 206 68.9
Gohir.A10G219500 Gossypium hirsutum HOM05D005838 ORTHO05D007177 5.4e-76 288.1 210 69.5
Gohir.D10G229000 Gossypium hirsutum HOM05D005838 ORTHO05D007177 5.4e-76 288.1 210 69.5
Gorai.011G261500 Gossypium raimondii HOM05D005838 ORTHO05D007177 5.4e-76 288.1 210 69.5
FAN06G0860 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.1e-76 287.7 213 67.6
FAN06G0984 Fragaria x ananassa HOM05D005838 ORTHO05D007177 7.1e-76 287.7 213 67.6
Zm00001eb331580 Zea mays HOM05D005838 ORTHO05D007177 7.1e-76 287.7 213 67.6
Os01g0248600 Oryza sativa ssp. japonica HOM05D005838 ORTHO05D007177 9.3e-76 287.3 213 67.6
TAR369G1142 Trochodendron aralioides HOM05D005838 ORTHO05D007177 1.6e-75 286.6 191 74.9
FAN10G2643 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.1e-75 286.2 213 67.1
HanXRQChr14g0458031 Helianthus annuus HOM05D005838 ORTHO05D007177 2.7e-75 285.8 194 72.7
TAR623G0537 Trochodendron aralioides HOM05D005838 ORTHO05D007177 2.7e-75 285.8 204 71.6
FvH4_7g22520 Fragaria vesca HOM05D005838 ORTHO05D007177 4.6e-75 285.0 213 66.7
RcHm_v2.0_Chr1g0367201 Rosa chinensis HOM05D005838 ORTHO05D007177 4.6e-75 285.0 213 66.7
Duzib114G0236 Durio zibethinus HOM05D005838 ORTHO05D007177 6.0e-75 284.6 210 68.1
PSO339G6019 Papaver somniferum HOM05D005838 ORTHO05D007177 6.0e-75 284.6 213 67.6
arahy.Tifrunner.gnm1.ann1.5TUK4V Arachis hypogaea HOM05D005838 ORTHO05D007177 1.0e-74 283.9 210 67.6
CANSAT78G0186 Cannabis sativa HOM05D005838 ORTHO05D007177 1.0e-74 283.9 217 65.0
MELO3C024840.2 Cucumis melo HOM05D005838 ORTHO05D007177 1.0e-74 283.9 213 65.7
FAN01G2632 Fragaria x ananassa HOM05D005838 ORTHO05D007177 2.3e-74 282.7 207 67.6
Thecc.10G041400 Theobroma cacao HOM05D005838 ORTHO05D007177 2.3e-74 282.7 210 68.6
Ca_24072_v3 Cicer arietinum L. HOM05D005838 ORTHO05D007177 6.7e-74 281.2 210 66.7
FAN01G2297 Fragaria x ananassa HOM05D005838 ORTHO05D007177 8.7e-74 280.8 207 67.1
Manes.07G116600 Manihot esculenta HOM05D005838 ORTHO05D007177 1.1e-73 280.4 212 67.9
FAN03G0424 Fragaria x ananassa HOM05D005838 ORTHO05D007177 1.5e-73 280.0 206 67.5
CsaV3_4G009680 Cucumis sativus L. HOM05D005838 ORTHO05D007177 2.5e-73 279.3 208 64.9
arahy.Tifrunner.gnm1.ann1.9R8UEA Arachis hypogaea HOM05D005838 ORTHO05D007177 4.3e-73 278.5 206 67.5
Glyma.16G058300 Glycine max HOM05D005838 ORTHO05D007177 4.3e-73 278.5 210 66.7
Phvul.001G114700 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 4.3e-73 278.5 210 65.7
arahy.Tifrunner.gnm1.ann1.YA5U61 Arachis hypogaea HOM05D005838 ORTHO05D007177 5.6e-73 278.1 206 67.5
Eucgr.J00011 Eucalyptus grandis HOM05D005838 ORTHO05D007177 5.6e-73 278.1 215 68.8
PSO541G0023 Papaver somniferum HOM05D005838 ORTHO05D007177 1.3e-72 276.9 213 66.7
MD01G1134500 Malus domestica HOM05D005838 ORTHO05D007177 1.6e-72 276.6 213 63.8
arahy.Tifrunner.gnm1.ann1.3RZV8E Arachis hypogaea HOM05D005838 ORTHO05D007177 2.1e-72 276.2 206 67.0
Lalb_Chr22g0360471 Lupinus albus HOM05D005838 ORTHO05D007177 2.1e-72 276.2 210 66.2
MD07G1199100 Malus domestica HOM05D005838 ORTHO05D007177 2.8e-72 275.8 213 62.9
Sed0000199 Sechium edule HOM05D005838 ORTHO05D007177 2.8e-72 275.8 213 63.4
VMungo1383G0749 Vigna mungo HOM05D005838 ORTHO05D007177 2.8e-72 275.8 210 65.2
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 3.7e-72 275.4 206 66.5
TPR.G2804 Trifolium pratense HOM05D005838 ORTHO05D007177 3.7e-72 275.4 210 66.2
Prupe.2G235900 Prunus persica HOM05D005838 ORTHO05D007177 2.4e-71 272.7 213 62.9
COL.COLO4_15048 Corchorus olitorius HOM05D005838 ORTHO05D007177 4.0e-71 271.9 211 64.9
Atru.chr12.445 Acer truncatum HOM05D005838 ORTHO05D007177 5.3e-71 271.6 206 65.5
Medtr7g029455 Medicago truncatula HOM05D005838 ORTHO05D007177 6.9e-71 271.2 216 63.4
ECA238G0467 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.2e-70 270.4 201 65.2
Sabra10G0157100 Salix brachista HOM05D005838 ORTHO05D007177 1.5e-70 270.0 212 64.2
Potri.010G203600 Populus trichocarpa HOM05D005838 ORTHO05D007177 4.5e-70 268.5 212 63.2
Sp3g10660 Schrenkiella parvula HOM05D005838 ORTHO05D007177 7.6e-70 267.7 213 63.8
SEGI_05999 Sequoiadendron giganteum HOM05D005838 ORTHO05D007177 2.9e-69 265.8 213 63.8
TWI34G1817 Tripterygium wilfordii HOM05D005838 ORTHO05D007177 3.8e-69 265.4 212 63.7
AT3G12530 Arabidopsis thaliana HOM05D005838 ORTHO05D007177 6.5e-69 264.6 213 64.3
MBI14_g35405_MAGBIO Magnolia biondii HOM05D005838 ORTHO05D007177 6.5e-69 264.6 213 66.7
CARHR087030 Cardamine hirsuta HOM05D005838 ORTHO05D007177 8.4e-69 264.2 213 63.4
Thhalv10021517m.g Eutrema salsugineum HOM05D005838 ORTHO05D007177 8.4e-69 264.2 213 62.9
ATR0579G085 Amborella trichopoda HOM05D005838 ORTHO05D007177 1.1e-68 263.8 213 62.4
Lj1g0024127 Lotus japonicus HOM05D005838 ORTHO05D007177 1.4e-68 263.5 207 63.3
AL3G24160 Arabidopsis lyrata HOM05D005838 ORTHO05D007177 1.9e-68 263.1 213 63.8
Ciclev10033314m.g Citrus clementina HOM05D005838 ORTHO05D007177 3.2e-68 262.3 197 66.5
Aa31sc79G70 Aethionema arabicum HOM05D005838 ORTHO05D007177 1.6e-67 260.0 213 63.4
Carub.0003s1186 Capsella rubella HOM05D005838 ORTHO05D007177 2.7e-67 259.2 213 62.9
BolC3t16845H Brassica oleracea HOM05D005838 ORTHO05D007177 4.6e-67 258.5 213 62.4
BcaB04g21071 Brassica carinata HOM05D005838 ORTHO05D007177 7.9e-67 257.7 217 63.6
BraA03t12920Z Brassica rapa HOM05D005838 ORTHO05D007177 1.8e-66 256.5 213 62.4
C03p45720 Brassica napus HOM05D005838 ORTHO05D007177 5.1e-66 255.0 206 62.6
A03p37670 Brassica napus HOM05D005838 ORTHO05D007177 1.5e-65 253.4 206 62.6
Actinidia13881 Actinidia chinensis HOM05D005838 ORTHO05D007177 9.6e-65 250.8 156 82.1
ECA236G5038 Erigeron canadensis HOM05D005838 ORTHO05D007177 9.6e-65 250.8 186 65.1
THA.LOC104827330 Tarenaya hassleriana HOM05D005838 ORTHO05D007177 1.8e-63 246.5 194 64.9
Mapoly0001s0197 Marchantia polymorpha HOM05D005838 ORTHO05D007177 3.4e-62 242.3 209 56.5
PGR044G1343 Punica granatum HOM05D005838 ORTHO05D007177 1.3e-61 240.4 206 63.1
SalBow6G6757 Salvia bowleyana HOM05D005838 ORTHO05D007177 1.3e-61 240.4 135 91.1
Duzib128G0804 Durio zibethinus HOM05D005838 ORTHO05D007177 2.2e-61 239.6 191 63.9
SMO358G0240 Selaginella moellendorffii HOM05D005838 ORTHO05D007177 2.9e-61 239.2 185 63.2
Pp3c24_19790 Physcomitrium patens HOM05D005838 ORTHO05D007177 6.3e-56 221.5 215 53.5
Phvul.004G101800 Phaseolus vulgaris HOM05D005838 ORTHO05D007177 1.2e-54 217.2 145 70.3
CBR_g83733 Chara braunii HOM05D005838 ORTHO05D007177 7.2e-52 208.0 166 61.4
Potri.008G056200 Populus trichocarpa HOM05D005838 ORTHO05D007177 8.5e-45 184.5 212 50.5
AagrBONN_evm.TU.Sc2ySwM_117.2288 Anthoceros agrestis HOM05D005838 ORTHO05D007177 2.3e-42 176.4 204 47.5
ECA240G3935 Erigeron canadensis HOM05D005838 ORTHO05D007177 1.7e-37 160.2 113 69.0
PRCOL_00001833 Prasinoderma coloniale HOM05D005838 ORTHO05D007177 8.8e-34 147.9 179 40.8
MCO01G144 Micromonas commoda HOM05D005838 ORTHO05D007177 4.8e-32 142.1 175 40.6
ClCG10G009550 Citrullus lanatus HOM05D005838 ORTHO05D007177 1.6e-27 127.1 79 73.4
Ah.04g162270 Amaranthus hybridus HOM05D005838 ORTHO05D007177 5.2e-26 122.1 63 87.3
Cre01.g029100 Chlamydomonas reinhardtii HOM05D005838 ORTHO05D007177 3.4e-25 119.4 177 40.1
unitig_27.g25062 Utricularia gibba HOM05D005838 ORTHO05D007177 1.3e-24 117.5 116 55.2
AagrBONN_evm.TU.Sc2ySwM_368.230 Anthoceros agrestis HOM05D005838 ORTHO05D007177 1.1e-23 114.4 114 47.4
Oeu048244.1 Olea europaea HOM05D005838 ORTHO05D007177 3.6e-19 99.4 50 88.0
BcaC09g48252 Brassica carinata HOM05D000758 ORTHO05D001216 1.3e-16 90.9 116 44.0
Cpa.g.sc1.409 Carica papaya HOM05D005838 ORTHO05D007177 1.2e-14 84.3 90 53.3
CSS0016900 Camellia sinensis var. sinensis HOM05D005838 ORTHO05D007177 7.7e-14 81.6 46 80.4
C01p52640 Brassica napus HOM05D005838 ORTHO05D007177 8.6e-13 78.2 91 46.2
BolC1t05204H Brassica oleracea HOM05D005838 ORTHO05D007177 3.6e-11 72.8 87 46.0
SGA_v2.0_scaffold3389G54328 Striga asiatica HOM05D006818 ORTHO05D007177 8.9e-10 68.2 46 76.1
C05p55400 Brassica napus HOM05D005838 ORTHO05D007177 5.7e-09 65.5 79 44.3
BNapus_Darmor_BZH_scaffold_149p00070 Brassica napus HOM05D005838 ORTHO05D041122 7.5e-09 65.1 150 32.7
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 7.5e-09 65.1 42 78.6
BolC5t34206H Brassica oleracea HOM05D005838 ORTHO05D007177 1.7e-08 63.9 84 42.9
Psat7g263960 Pisum sativum HOM05D005838 ORTHO05D007177 1.8e-07 60.5 49 61.2
Dinv18752 Davidia involucrata HOM05D036176 ORTHO05D007177 4.1e-07 59.3 47 63.8
Actinidia29229 Actinidia chinensis HOM05D005838 ORTHO05D007177 5.4e-07 58.9 41 70.7


User provided reference genes

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