Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 8.1e-87 323.9 192 100.0
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 8.5e-44 181.0 170 63.5
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 9.7e-40 167.5 131 70.2
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 8.5e-36 154.5 118 70.3
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 9.4e-35 151.0 111 73.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 3.7e-31 139.0 110 64.5
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.1e-30 136.0 113 60.2
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.1e-30 135.6 121 57.9
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 1.6e-29 133.7 110 65.5
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.6e-29 133.7 116 59.5
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 3.5e-29 132.5 103 62.1
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.5e-29 132.1 113 58.4
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 1.3e-28 130.6 122 54.9
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 3.8e-28 129.0 115 58.3
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 6.5e-28 128.3 118 56.8
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 6.5e-28 128.3 109 59.6
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 1.5e-27 127.1 115 54.8
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 4.2e-27 125.6 127 53.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 5.5e-27 125.2 155 48.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 5.5e-27 125.2 129 54.3
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 7.2e-27 124.8 129 48.8
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.4e-27 124.4 107 58.9
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.6e-26 123.6 127 48.8
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.6e-26 123.6 116 59.5
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.7e-26 122.9 120 55.0
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 8.0e-26 121.3 94 64.9
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.3e-25 119.8 89 64.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 3.0e-25 119.4 119 51.3
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.0e-25 119.4 101 55.4
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 5.2e-25 118.6 119 54.6
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 5.2e-25 118.6 100 60.0
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 8.8e-25 117.9 128 52.3
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.2e-24 117.5 115 53.9
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-24 117.5 102 56.9
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-24 117.5 102 56.9
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 1.5e-24 117.1 161 41.6
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 2.0e-24 116.7 105 54.3
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-24 116.7 102 56.9
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.6e-24 116.3 106 56.6
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.6e-24 116.3 143 46.9
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.4e-24 115.9 104 55.8
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 3.4e-24 115.9 106 56.6
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 4.4e-24 115.5 106 56.6
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 5.7e-24 115.2 94 58.5
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 5.7e-24 115.2 128 47.7
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.5e-24 114.8 102 55.9
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.5e-24 114.8 123 58.5
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 9.8e-24 114.4 122 53.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 9.8e-24 114.4 108 54.6
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.3e-23 114.0 101 54.5
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.3e-23 114.0 121 51.2
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.8e-23 112.8 105 52.4
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 4.8e-23 112.1 121 50.4
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.8e-23 112.1 123 48.8
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 8.3e-23 111.3 100 57.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.1e-22 110.9 116 51.7
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.1e-22 110.9 133 47.4
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.8e-22 110.2 110 48.2
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 2.4e-22 109.8 99 56.6
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 3.1e-22 109.4 109 52.3
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 4.1e-22 109.0 99 55.6
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 5.4e-22 108.6 130 47.7
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 5.4e-22 108.6 77 66.2
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 9.1e-22 107.8 102 50.0
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.2e-21 107.5 113 50.4
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.2e-21 107.5 123 48.8
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.2e-21 107.5 123 48.0
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.2e-21 107.5 94 54.3
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.0e-21 106.7 100 51.0
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.0e-21 106.7 93 52.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.7e-21 106.3 123 47.2
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 3.5e-21 105.9 104 49.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 4.5e-21 105.5 132 48.5
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 4.5e-21 105.5 118 49.2
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 4.5e-21 105.5 115 51.3
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 7.7e-21 104.8 132 49.2
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.3e-20 104.0 102 48.0
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.7e-20 103.6 102 52.9
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-20 102.8 95 51.6
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.8e-20 102.4 86 57.0
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.0e-20 102.1 102 49.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.1e-19 100.9 119 45.4
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-19 100.5 102 48.0
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.3e-19 99.4 134 46.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 7.2e-19 98.2 84 56.0
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.6e-18 97.1 95 51.6
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 2.1e-18 96.7 90 53.3
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.8e-18 96.3 102 51.0
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 2.8e-18 96.3 133 42.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 3.6e-18 95.9 94 51.1
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 4.7e-18 95.5 118 44.9
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.0e-17 94.4 96 50.0
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 2.3e-17 93.2 129 45.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 4.0e-17 92.4 100 47.0
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.2e-16 90.9 105 47.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.2e-16 90.9 121 44.6
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.2e-16 90.9 112 42.9
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.5e-16 90.5 97 44.3
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.5e-16 90.5 82 61.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 4.4e-16 89.0 107 42.1
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 7.5e-16 88.2 95 46.3
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.8e-15 86.3 89 44.9
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 2.4e-14 83.2 115 40.0
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.1e-14 82.8 143 37.1
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-14 82.8 74 52.7
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 1.2e-13 80.9 61 62.3
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 3.5e-13 79.3 67 58.2
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 5.9e-13 78.6 104 41.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 7.8e-13 78.2 155 34.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-12 76.6 131 36.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.5e-11 73.9 89 42.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 9.5e-11 71.2 125 39.2


User provided reference genes

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