Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 8.2e-76 287.0 143 100.0
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 3.6e-39 165.2 147 63.3
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 2.9e-20 102.4 126 45.2
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 9.2e-19 97.4 147 42.2
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 7.8e-18 94.4 137 44.5
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 7.8e-18 94.4 127 43.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 1.1e-16 90.5 134 42.5
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 2.5e-16 89.4 152 41.4
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 4.3e-16 88.6 131 45.8
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 3.6e-15 85.5 136 41.2
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.3e-14 82.8 133 40.6
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.1e-14 82.4 132 40.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 4.0e-14 82.0 132 40.9
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 5.2e-14 81.6 133 41.4
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 6.8e-14 81.3 123 43.9
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.2e-13 80.5 118 41.5
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.5e-13 80.1 119 43.7
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.4e-13 78.6 134 39.6
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 5.8e-13 78.2 129 38.8
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 7.5e-13 77.8 128 39.1
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.2e-12 76.3 148 37.8
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.7e-12 75.5 147 38.1
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 4.9e-12 75.1 126 39.7
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 6.4e-12 74.7 128 37.5
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 8.3e-12 74.3 120 44.2
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 8.3e-12 74.3 128 40.6
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.1e-11 73.9 122 38.5
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.1e-11 73.9 126 36.5
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 1.4e-11 73.6 135 40.7
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 5.4e-11 71.6 126 36.5
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 5.4e-11 71.6 127 36.2
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 9.2e-11 70.9 127 37.8
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 9.2e-11 70.9 111 42.3
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 9.2e-11 70.9 145 36.6
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.2e-10 70.5 132 38.6
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.6e-10 70.1 110 42.7
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.6e-10 70.1 110 42.7
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 2.1e-10 69.7 150 41.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 2.1e-10 69.7 142 36.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 2.7e-10 69.3 148 37.2
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.5e-10 68.9 122 41.0
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 3.5e-10 68.9 125 38.4
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.5e-10 68.9 125 38.4
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 6.0e-10 68.2 127 40.9
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 6.0e-10 68.2 105 39.0
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 6.0e-10 68.2 118 42.4
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 1.3e-09 67.0 109 45.0
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-09 66.6 149 34.9
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 2.3e-09 66.2 130 36.9
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 3.9e-09 65.5 128 36.7
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 5.1e-09 65.1 127 39.4
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 5.1e-09 65.1 116 40.5
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.1e-08 63.9 104 41.3
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.5e-08 63.5 114 37.7
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 1.5e-08 63.5 122 36.9
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 3.3e-08 62.4 127 36.2
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 3.3e-08 62.4 103 41.7
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 9.5e-08 60.8 135 35.6
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.6e-07 60.1 151 32.5
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.1e-07 59.7 120 37.5
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.1e-07 59.7 106 39.6
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 2.8e-07 59.3 129 34.9
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 2.8e-07 59.3 125 36.0
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.8e-07 59.3 120 39.2
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.8e-07 59.3 112 38.4
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 4.7e-07 58.5 131 37.4
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 4.7e-07 58.5 110 35.5
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 6.2e-07 58.2 110 38.2
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 1.1e-06 57.4 110 35.5
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 1.4e-06 57.0 112 41.1
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 5.2e-06 55.1 115 34.8
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 6.8e-06 54.7 108 37.0
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 8.9e-06 54.3 110 37.3
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 8.9e-06 54.3 141 30.5


User provided reference genes

Program Settings