Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 3.8e-190 667.9 322 100.0
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 4.2e-88 328.9 234 69.2
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 6.1e-87 325.1 243 65.0
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.7e-81 307.0 234 63.2
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 5.0e-81 305.4 231 63.2
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 8.5e-81 304.7 236 63.6
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.2e-80 302.8 231 62.8
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 4.2e-80 302.4 234 62.4
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 5.5e-80 302.0 231 61.9
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 7.2e-80 301.6 246 58.5
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 7.2e-80 301.6 237 61.6
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 2.7e-79 299.7 226 63.3
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 3.6e-79 299.3 236 61.0
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 3.6e-79 299.3 230 63.9
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 1.8e-78 297.0 234 61.1
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 1.8e-78 297.0 231 61.5
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 3.0e-78 296.2 234 62.0
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 2.0e-77 293.5 230 60.0
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.0e-77 293.5 225 62.2
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 2.6e-77 293.1 224 62.1
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 5.7e-77 292.0 230 60.0
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 7.5e-77 291.6 232 60.8
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 1.3e-76 290.8 234 60.3
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.7e-76 290.4 230 60.0
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.7e-76 290.4 230 60.0
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.8e-76 289.7 250 55.2
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.7e-76 289.3 225 61.3
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 8.3e-76 288.1 230 59.1
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 1.2e-74 284.3 277 51.3
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 7.7e-74 281.6 234 56.8
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 1.1e-72 277.7 236 55.9
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.9e-72 276.9 231 55.4
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 2.5e-72 276.6 225 57.8
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 2.5e-72 276.6 242 59.1
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.3e-72 276.2 270 51.1
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 4.3e-72 275.8 229 56.3
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 2.8e-71 273.1 251 53.8
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.4e-70 270.8 224 57.1
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.4e-69 266.2 231 56.7
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 1.3e-68 264.2 218 58.3
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 6.4e-68 261.9 254 51.2
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.1e-67 259.2 227 55.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 1.2e-66 257.7 299 46.2
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 3.1e-62 243.0 270 45.6
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 3.1e-62 243.0 214 53.7
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.2e-60 236.9 157 70.7
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 3.2e-59 233.0 234 49.1
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.1e-59 232.6 227 50.7
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 5.6e-56 222.2 231 48.5
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 9.5e-56 221.5 175 59.4
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 6.2e-55 218.8 231 46.8
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 1.8e-54 217.2 157 65.0
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 5.2e-54 215.7 162 65.4
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 6.8e-54 215.3 185 54.6
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 3.2e-51 206.5 231 47.2
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 3.2e-51 206.5 179 56.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 5.4e-51 205.7 188 52.7
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 1.2e-50 204.5 189 50.8
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 3.5e-50 203.0 166 59.6
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 4.6e-50 202.6 168 56.5
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 7.8e-50 201.8 231 44.2
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 1.2e-47 194.5 231 45.5
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.7e-44 184.1 151 55.0
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 5.6e-40 169.1 242 38.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 7.3e-40 168.7 243 37.9
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 4.7e-39 166.0 330 32.7
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.4e-38 164.5 232 38.4
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.0e-38 162.9 234 38.0
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 6.9e-38 162.2 240 37.1
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 7.6e-37 158.7 234 35.5
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.5e-32 144.4 136 55.1
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.0e-29 134.0 119 52.1
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.3e-28 131.3 244 29.1
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 3.8e-28 129.8 96 67.7
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.4e-27 127.1 217 30.0
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 2.4e-27 127.1 217 30.0
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 5.4e-27 125.9 72 80.6
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 7.9e-26 122.1 213 28.6
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.5e-24 117.9 80 67.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 2.5e-24 117.1 138 44.2
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.4e-19 101.3 72 66.7
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 1.4e-19 101.3 72 66.7
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 1.1e-16 91.7 70 60.0
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 3.1e-14 83.6 99 44.4
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 4.0e-14 83.2 61 55.7
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 3.4e-13 80.1 43 76.7
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.7e-10 70.5 43 76.7
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 1.3e-09 68.2 44 70.5


User provided reference genes

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