Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 0.0e+00 1280.8 665 100.0
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 1.5e-273 946.0 641 75.8
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 9.5e-268 926.8 664 72.6
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 4.0e-250 868.2 681 67.3
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 4.0e-242 841.6 660 68.3
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 4.0e-234 815.1 631 67.4
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 3.5e-230 802.0 655 63.7
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 4.0e-226 788.5 647 64.8
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 4.0e-226 788.5 658 63.2
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 8.4e-224 780.8 642 65.3
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 1.9e-223 779.6 635 65.8
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 1.6e-222 776.5 641 64.0
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 6.0e-222 774.6 645 64.0
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 1.5e-220 770.0 639 64.6
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 2.5e-220 769.2 630 64.6
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 9.6e-220 767.3 627 63.3
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 4.8e-219 765.0 651 63.4
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 5.3e-218 761.5 637 63.3
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 6.9e-218 761.1 630 63.7
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 9.0e-218 760.8 636 64.2
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 1.7e-216 756.5 637 63.0
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 1.1e-215 753.8 634 62.3
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 2.7e-214 749.2 677 59.5
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 7.9e-214 747.7 639 61.8
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 1.3e-213 746.9 634 63.7
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 6.7e-213 744.6 641 62.2
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 2.5e-212 742.7 674 59.9
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 3.3e-212 742.3 642 62.1
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 5.6e-212 741.5 642 61.7
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 1.3e-211 740.3 642 62.1
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 1.8e-210 736.5 635 61.9
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 1.4e-207 726.9 642 61.1
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 1.4e-207 726.9 647 61.1
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 2.5e-207 726.1 641 59.6
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 5.5e-207 724.9 649 61.5
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 8.7e-205 717.6 635 61.3
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 4.3e-204 715.3 635 61.1
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 1.3e-203 713.8 633 60.5
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 4.8e-203 711.8 633 60.0
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 1.4e-202 710.3 624 59.8
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 1.8e-202 709.9 635 61.7
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 4.1e-202 708.8 649 61.0
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 5.3e-202 708.4 643 59.9
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 1.3e-200 703.7 632 60.9
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.2e-198 697.2 633 59.2
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 3.6e-198 695.7 644 58.7
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 7.9e-198 694.5 633 59.4
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 3.9e-197 692.2 624 60.3
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 1.7e-195 686.8 640 58.4
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 2.2e-195 686.4 639 58.2
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 2.2e-195 686.4 638 58.8
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 3.1e-194 682.6 639 58.2
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 1.5e-193 680.2 634 58.4
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 4.2e-191 672.2 633 57.0
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 1.2e-190 670.6 633 59.1
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 6.1e-190 668.3 636 57.7
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 6.1e-190 668.3 630 58.3
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 1.8e-189 666.8 644 58.2
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 1.5e-188 663.7 633 58.3
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 2.6e-188 662.9 553 63.7
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 5.7e-188 661.8 639 57.3
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 4.1e-186 655.6 640 56.7
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 2.0e-185 653.3 642 56.7
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 7.7e-185 651.4 643 56.8
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 1.0e-184 651.0 640 56.6
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 2.2e-184 649.8 642 56.5
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 9.4e-183 644.4 641 55.2
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 1.3e-179 634.0 641 55.9
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 2.2e-179 633.3 641 57.3
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 3.1e-178 629.4 639 55.1
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 4.1e-178 629.0 639 54.6
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 7.0e-178 628.2 551 61.0
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 1.6e-177 627.1 639 54.8
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 7.7e-177 624.8 643 54.7
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 1.3e-176 624.0 557 61.0
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 1.5e-175 620.5 582 59.5
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 2.5e-175 619.8 645 55.5
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 3.2e-175 619.4 443 71.3
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 7.2e-175 618.2 639 54.0
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 6.1e-174 615.1 638 56.0
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 1.0e-173 614.4 642 54.5
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 1.6e-166 590.5 633 53.2
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 8.0e-166 588.2 563 58.4
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 4.0e-165 585.9 643 53.7
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 9.8e-164 581.3 457 66.7
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 1.3e-163 580.9 651 50.8
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 8.9e-157 558.1 634 52.4
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 8.9e-157 558.1 615 53.2
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 5.7e-156 555.4 639 51.8
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 7.8e-153 545.0 627 51.0
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 1.3e-152 544.3 671 48.9
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 1.9e-151 540.4 638 50.8
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 1.8e-149 533.9 646 49.7
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 2.8e-134 483.4 357 68.9
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 4.7e-134 482.6 635 46.6
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 2.9e-123 446.8 654 43.7
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 3.6e-110 403.3 434 50.5
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 1.4e-101 374.8 675 40.1
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 4.9e-99 366.3 256 69.1
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 6.9e-93 345.9 316 55.1
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 2.0e-92 344.4 235 72.3
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 5.2e-64 250.0 212 60.4
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 2.8e-62 244.2 314 50.3
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.8e-40 171.8 120 69.2
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.7e-38 165.2 104 75.0
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.8e-37 161.8 100 76.0
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.6e-36 158.7 104 72.1
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.6e-28 132.1 111 62.2
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 1.6e-25 122.1 84 70.2
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 2.8e-25 121.3 440 28.6
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 2.3e-16 91.7 235 30.6
Glyma.12G071167 Glycine max HOM05D006884 ORTHO05D008604 2.0e-15 88.6 198 39.9
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 3.3e-10 71.2 63 60.3
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 8.9e-08 63.2 98 41.8
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 1.5e-07 62.4 97 39.2
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 6.4e-06 57.0 52 55.8


User provided reference genes

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