Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 2.2e-64 248.8 129 100.0
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 4.5e-25 118.2 114 55.3
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 2.2e-19 99.4 132 44.7
Migut.N02604 Erythranthe guttata HOM05D005728 ORTHO05D005733 3.7e-19 98.6 128 46.1
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 6.4e-19 97.8 125 47.2
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 8.3e-19 97.4 130 46.2
SalBow3G1069 Salvia bowleyana HOM05D005728 ORTHO05D005733 3.2e-18 95.5 115 47.0
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 9.2e-18 94.0 126 46.8
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 1.6e-17 93.2 125 45.6
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 2.7e-17 92.4 132 42.4
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 4.6e-17 91.7 118 44.1
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 3.9e-16 88.6 125 42.4
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 3.9e-16 88.6 118 45.8
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 8.6e-16 87.4 130 47.7
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 8.6e-16 87.4 130 47.7
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 1.5e-15 86.7 119 43.7
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.5e-15 86.7 130 47.7
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 3.3e-15 85.5 133 40.6
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 5.6e-15 84.7 120 43.3
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 7.3e-15 84.3 125 42.4
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 7.3e-15 84.3 129 39.5
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 9.5e-15 84.0 120 45.0
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 3.6e-14 82.0 122 41.0
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 6.2e-14 81.3 137 36.5
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 6.2e-14 81.3 129 41.9
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 6.2e-14 81.3 129 41.9
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 8.0e-14 80.9 129 41.1
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 1.1e-13 80.5 128 42.2
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 1.4e-13 80.1 115 40.9
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 1.4e-13 80.1 122 45.9
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.4e-13 80.1 129 41.1
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.4e-13 80.1 129 41.1
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.4e-13 80.1 121 40.5
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 1.8e-13 79.7 129 38.8
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.8e-13 79.7 129 38.0
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 2.3e-13 79.3 117 42.7
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 2.3e-13 79.3 114 40.4
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 3.1e-13 79.0 131 38.9
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.1e-13 79.0 125 40.8
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.0e-13 78.6 116 44.8
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 5.2e-13 78.2 122 39.3
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 6.8e-13 77.8 129 40.3
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 8.9e-13 77.4 130 40.8
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 8.9e-13 77.4 123 39.0
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.2e-12 77.0 123 40.7
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 1.2e-12 77.0 122 41.0
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 1.2e-12 77.0 123 39.8
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 1.5e-12 76.6 130 36.2
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 1.5e-12 76.6 120 40.8
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 2.0e-12 76.3 129 39.5
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 2.0e-12 76.3 129 36.4
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 2.6e-12 75.9 128 39.8
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 5.8e-12 74.7 126 37.3
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 5.8e-12 74.7 140 35.0
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 7.5e-12 74.3 120 41.7
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 1.3e-11 73.6 120 41.7
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 1.3e-11 73.6 125 38.4
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 1.7e-11 73.2 132 37.1
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 1.7e-11 73.2 144 34.7
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 2.2e-11 72.8 120 40.0
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 2.2e-11 72.8 130 38.5
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 3.7e-11 72.0 120 41.7
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.7e-11 72.0 133 36.8
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 3.7e-11 72.0 127 35.4
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 6.4e-11 71.2 123 39.8
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 6.4e-11 71.2 144 34.7
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 6.4e-11 71.2 122 38.5
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 8.3e-11 70.9 140 34.3
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 8.3e-11 70.9 130 36.9
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 1.4e-10 70.1 119 41.2
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 1.4e-10 70.1 130 39.2
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.4e-10 69.3 120 39.2
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 2.4e-10 69.3 107 42.1
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 2.4e-10 69.3 127 33.9
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 5.4e-10 68.2 126 36.5
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 7.0e-10 67.8 102 40.2
Oeu001270.1 Olea europaea HOM05D005728 ORTHO05D005733 7.0e-10 67.8 130 40.8
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 9.2e-10 67.4 130 33.8
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 1.2e-09 67.0 110 43.6
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 1.2e-09 67.0 127 37.0
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 1.2e-09 67.0 126 37.3
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 1.6e-09 66.6 127 33.9
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 2.7e-09 65.9 125 34.4
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 4.6e-09 65.1 118 33.9
Oeu030182.1 Olea europaea HOM05D005728 ORTHO05D005733 4.6e-09 65.1 116 40.5
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 6.0e-09 64.7 110 37.3
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 7.8e-09 64.3 129 34.9
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.3e-08 62.8 104 40.4
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 3.0e-08 62.4 115 33.0
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.0e-08 62.4 98 42.9
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 3.9e-08 62.0 131 35.1
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 3.9e-08 62.0 125 34.4
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 8.6e-08 60.8 114 34.2
ATR0048G010 Amborella trichopoda HOM05D005728 ORTHO05D005733 2.5e-07 59.3 119 33.6
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.5e-07 59.3 132 30.3
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 3.3e-07 58.9 106 37.7
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 4.3e-07 58.5 113 40.7
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 5.6e-07 58.2 109 39.4
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 1.2e-06 57.0 143 30.8
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 3.6e-06 55.5 134 32.8
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 3.6e-06 55.5 134 32.8
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 3.6e-06 55.5 108 37.0
AT5G60650 Arabidopsis thaliana HOM05D010860 ORTHO05D005733 4.7e-06 55.1 135 31.1
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 8.1e-06 54.3 109 35.8


User provided reference genes

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