Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 4.9e-194 681.0 361 100.0
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.2e-43 181.4 180 68.9
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 3.6e-43 179.9 179 69.3
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 4.6e-43 179.5 173 69.4
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.6e-43 179.5 179 68.7
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 1.4e-42 177.9 179 67.0
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 1.5e-41 174.5 172 55.2
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 7.4e-41 172.2 174 66.7
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 3.7e-40 169.9 168 68.5
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 6.3e-40 169.1 168 67.9
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 8.2e-40 168.7 169 66.9
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 8.2e-40 168.7 169 65.7
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 2.0e-38 164.1 186 62.4
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 6.5e-37 159.1 179 63.7
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 3.2e-36 156.8 173 50.9
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 4.2e-36 156.4 175 62.3
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 2.1e-35 154.1 174 66.1
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 6.1e-35 152.5 175 49.7
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 6.1e-35 152.5 170 50.0
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 6.1e-35 152.5 170 50.6
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 7.9e-35 152.1 190 58.4
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 1.8e-34 151.0 171 49.1
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 3.9e-34 149.8 177 49.2
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 6.7e-34 149.1 171 48.5
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 8.8e-34 148.7 174 48.9
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 1.1e-33 148.3 157 64.3
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 2.0e-33 147.5 182 55.5
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 2.6e-33 147.1 185 45.9
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 4.4e-33 146.4 170 49.4
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 4.4e-33 146.4 170 50.0
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 5.7e-33 146.0 176 48.9
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 9.7e-33 145.2 163 50.3
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 1.7e-32 144.4 170 60.6
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 1.7e-32 144.4 174 60.3
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.7e-32 144.4 173 46.8
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 2.2e-32 144.1 171 60.2
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 2.2e-32 144.1 178 48.3
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 2.2e-32 144.1 190 60.5
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 3.7e-32 143.3 170 56.5
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 3.7e-32 143.3 174 46.6
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 4.8e-32 142.9 170 49.4
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 4.8e-32 142.9 170 49.4
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 4.8e-32 142.9 168 58.3
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 6.3e-32 142.5 177 50.8
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 8.2e-32 142.1 176 61.4
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 1.1e-31 141.7 177 48.6
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 1.1e-31 141.7 166 50.0
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.1e-31 141.7 187 47.1
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 3.1e-31 140.2 174 46.0
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 3.1e-31 140.2 177 48.6
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 4.1e-31 139.8 174 45.4
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 7.0e-31 139.0 172 47.7
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 9.1e-31 138.7 175 56.0
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 1.2e-30 138.3 178 44.9
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 1.6e-30 137.9 183 53.6
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 2.0e-30 137.5 173 46.8
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 2.6e-30 137.1 175 56.0
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 3.5e-30 136.7 172 46.5
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.5e-30 136.3 176 60.8
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 4.5e-30 136.3 180 48.9
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 4.5e-30 136.3 175 54.9
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 7.7e-30 135.6 187 55.6
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 1.0e-29 135.2 170 44.7
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 1.7e-29 134.4 184 48.9
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.2e-29 134.0 171 45.6
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 2.2e-29 134.0 176 60.2
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 2.2e-29 134.0 177 45.8
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 3.8e-29 133.3 186 54.8
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 3.8e-29 133.3 178 46.1
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 3.8e-29 133.3 168 48.8
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 1.1e-28 131.7 108 81.5
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.9e-28 131.0 183 54.1
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 2.5e-28 130.6 182 54.4
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 2.5e-28 130.6 183 54.1
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 2.5e-28 130.6 183 54.1
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 5.5e-28 129.4 167 55.1
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 5.5e-28 129.4 171 46.8
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 5.5e-28 129.4 171 45.6
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 1.6e-27 127.9 171 45.0
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.7e-27 126.3 171 45.0
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 4.7e-27 126.3 106 81.1
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 6.1e-27 125.9 174 43.1
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 6.1e-27 125.9 176 44.9
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 8.0e-27 125.6 174 43.1
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 1.0e-26 125.2 178 44.4
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 1.4e-26 124.8 177 44.1
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 1.4e-26 124.8 179 55.3
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 1.8e-26 124.4 125 69.6
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 2.3e-26 124.0 174 42.5
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 3.0e-26 123.6 167 44.3
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 3.0e-26 123.6 128 55.5
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 3.0e-26 123.6 170 42.9
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 3.0e-26 123.6 171 41.5
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 4.0e-26 123.2 174 42.5
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 4.0e-26 123.2 174 42.5
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 4.0e-26 123.2 173 43.4
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 4.0e-26 123.2 106 74.5
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 6.7e-26 122.5 190 41.1
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 8.8e-26 122.1 174 42.0
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 1.2e-25 121.7 177 42.9
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 1.5e-25 121.3 162 55.6
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 1.5e-25 121.3 118 56.8
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 2.6e-25 120.6 171 42.7
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 4.4e-25 119.8 184 52.2
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.4e-25 119.8 230 37.0
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 7.5e-25 119.0 179 41.9
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.7e-24 117.9 106 56.6
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 2.8e-24 117.1 172 43.0
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 4.8e-24 116.3 180 40.6
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 6.3e-24 115.9 179 43.0
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 8.2e-24 115.5 111 53.2
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 8.2e-24 115.5 122 50.0
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 1.4e-23 114.8 180 38.9
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 4.1e-23 113.2 178 40.4
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 5.3e-23 112.8 165 44.2
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.2e-22 111.7 110 54.5
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 5.9e-22 109.4 103 56.3
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 2.9e-21 107.1 175 37.7
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 8.5e-21 105.5 174 40.8
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.2e-19 101.7 186 39.2
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.6e-19 101.3 192 42.2
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 2.1e-19 100.9 183 36.6
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 6.1e-19 99.4 142 42.3
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.0e-18 98.6 119 46.2
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 1.8e-18 97.8 120 45.0
SGA_v2.0_scaffold97G29233 Striga asiatica HOM05D024675 ORTHO05D020971 8.8e-18 95.5 82 61.0
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 4.4e-17 93.2 140 44.3
SGA_v2.0_scaffold126G33930 Striga asiatica HOM05D024675 ORTHO05D020971 7.5e-17 92.4 93 58.1
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 3.7e-16 90.1 97 50.5
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 6.3e-16 89.4 112 49.1
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 5.9e-14 82.8 121 44.6
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 7.7e-14 82.4 178 31.5
Psat5g047320 Pisum sativum HOM05D030450 ORTHO05D020971 4.0e-10 70.1 96 38.5
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 1.5e-09 68.2 76 48.7
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 1.7e-08 64.7 110 39.1
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 1.7e-08 64.7 110 39.1
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 4.9e-08 63.2 61 55.7
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 1.1e-07 62.0 104 41.3
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 1.4e-07 61.6 66 80.3
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 7.0e-07 59.3 102 30.4


User provided reference genes

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