Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 0.0e+00 1952.2 999 100.0
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 0.0e+00 1317.8 1007 68.5
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 0.0e+00 1228.8 966 66.9
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 0.0e+00 1082.0 940 62.2
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 2.8e-308 1062.0 946 58.9
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 8.0e-303 1043.9 1005 55.9
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 5.0e-297 1024.6 1015 54.6
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 2.6e-293 1012.3 1027 53.5
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 7.5e-293 1010.7 1015 54.1
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 7.8e-290 1000.7 1032 53.2
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.3e-286 989.2 956 54.2
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 2.3e-286 989.2 1004 52.9
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 6.8e-286 987.6 985 54.3
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 4.4e-285 984.9 1005 52.7
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 2.4e-283 979.2 1054 51.2
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 7.0e-283 977.6 1011 52.0
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 1.6e-282 976.5 1056 50.5
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 7.3e-280 967.6 1023 52.3
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 2.0e-277 959.5 1005 50.7
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 5.8e-277 958.0 1016 51.4
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 5.8e-277 958.0 1006 50.7
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 3.5e-274 948.7 1008 50.4
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 6.0e-274 948.0 1008 50.5
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 1.0e-273 947.2 1005 52.6
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 1.9e-272 943.0 1003 50.9
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 4.7e-271 938.3 1014 50.7
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 1.1e-270 937.2 997 50.6
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.2e-269 933.7 1026 50.0
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.5e-269 933.3 1015 49.5
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 3.4e-269 932.2 1013 50.4
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 4.4e-269 931.8 996 50.1
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 5.8e-269 931.4 1015 50.1
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 1.7e-268 929.9 884 55.5
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 9.2e-267 924.1 1011 50.4
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 3.0e-265 919.1 957 50.4
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 3.0e-265 919.1 949 50.8
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 6.6e-265 917.9 1052 48.3
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 1.9e-264 916.4 993 51.2
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 8.1e-263 911.0 1006 49.7
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 3.1e-262 909.1 1033 49.5
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 6.4e-260 901.4 765 62.5
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 1.9e-259 899.8 1003 49.6
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 3.5e-258 895.6 1017 48.0
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 2.8e-255 885.9 1014 48.1
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 2.4e-254 882.9 902 52.1
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.3e-249 867.1 1012 46.9
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 3.0e-249 865.9 834 55.3
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 4.5e-245 852.0 952 49.4
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 9.9e-245 850.9 886 51.5
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 5.4e-243 845.1 1003 45.4
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 7.1e-243 844.7 1041 46.7
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 8.7e-241 837.8 966 47.8
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 2.8e-239 832.8 1007 45.8
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 8.1e-239 831.2 907 50.3
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 6.9e-238 828.2 895 50.5
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 8.4e-236 821.2 1007 44.3
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 2.7e-234 816.2 950 46.2
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 1.8e-233 813.5 998 44.9
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 1.6e-231 807.0 996 44.1
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 9.0e-230 801.2 1004 43.4
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 1.2e-229 800.8 1005 43.4
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 2.6e-229 799.7 996 44.9
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 4.2e-227 792.3 973 44.6
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 5.5e-227 792.0 1036 43.1
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 7.1e-227 791.6 1020 43.9
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 9.3e-227 791.2 1000 42.6
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 2.1e-226 790.0 1007 44.4
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 2.7e-226 789.6 1000 42.1
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 1.3e-225 787.3 995 42.5
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 3.9e-225 785.8 998 41.2
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 1.1e-224 784.3 1000 41.6
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 1.9e-224 783.5 995 42.4
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 9.7e-224 781.2 1001 41.9
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.2e-221 774.2 1001 41.8
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 7.7e-221 771.5 1021 43.4
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 7.7e-221 771.5 1016 41.4
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 2.9e-220 769.6 982 43.2
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 6.5e-220 768.5 1030 42.0
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 8.5e-220 768.1 912 45.4
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 3.2e-219 766.1 1008 43.2
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 1.8e-217 760.4 1040 43.3
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 7.4e-216 755.0 997 41.3
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 6.9e-214 748.4 1036 42.7
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 2.2e-212 743.4 905 45.1
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 8.5e-212 741.5 904 45.0
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 1.2e-210 737.6 1000 41.0
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 2.0e-208 730.3 1023 40.6
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 2.0e-208 730.3 902 44.0
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 2.5e-203 713.4 926 43.8
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 2.5e-195 686.8 683 54.2
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 2.7e-194 683.3 1018 39.5
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 3.5e-189 666.4 711 50.1
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 3.8e-188 662.9 893 40.6
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 1.1e-179 634.8 936 43.2
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 3.0e-177 626.7 831 41.3
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 4.4e-176 622.9 1041 37.7
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 1.5e-171 607.8 662 49.4
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.6e-165 587.8 816 40.4
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 1.2e-162 578.2 895 38.9
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 1.3e-135 488.4 920 33.8
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 4.5e-128 463.4 1008 30.4
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 1.3e-66 259.2 923 26.7
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 1.4e-65 255.8 646 31.1
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 2.7e-56 224.9 269 43.5
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 5.9e-56 223.8 323 43.0
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 8.3e-50 203.4 661 27.1
Atru.chr4.1801 Acer truncatum HOM05D006492 ORTHO05D008432 5.4e-49 200.7 183 55.7
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 4.9e-42 177.6 708 24.9
Lju414A5G29 Lonicera japonica HOM05D006492 ORTHO05D008432 5.1e-39 167.5 142 62.0
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 1.5e-30 139.4 422 27.7
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 1.0e-23 116.7 716 22.6
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 8.1e-21 107.1 165 36.4
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 1.3e-13 83.2 113 37.2


User provided reference genes

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