Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 2.7e-95 352.1 184 100.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 7.4e-45 184.5 133 79.7
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 4.5e-42 175.3 121 82.6
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 8.4e-41 171.0 134 76.1
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 7.9e-39 164.5 118 78.8
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.4e-32 143.7 126 63.5
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.4e-32 143.7 133 63.2
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.9e-32 143.3 123 67.5
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 5.5e-32 141.7 132 62.9
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 5.5e-32 141.7 132 62.9
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 7.2e-32 141.4 138 60.9
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 1.2e-31 140.6 134 61.2
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 2.7e-31 139.4 126 64.3
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.0e-30 137.5 136 62.5
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 1.8e-30 136.7 138 60.9
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.0e-30 136.0 139 56.8
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 3.0e-30 136.0 125 64.8
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 3.9e-30 135.6 134 59.7
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.1e-29 134.0 133 59.4
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.1e-29 134.0 133 59.4
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 1.9e-29 133.3 137 59.9
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 5.7e-29 131.7 154 54.5
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 7.4e-29 131.3 132 60.6
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 7.4e-29 131.3 132 60.6
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 7.4e-29 131.3 137 56.9
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 9.7e-29 131.0 126 60.3
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 9.7e-29 131.0 133 57.9
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 9.7e-29 131.0 136 58.1
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 9.7e-29 131.0 193 48.7
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.3e-28 130.6 154 53.9
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.6e-28 130.2 127 58.3
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.6e-28 130.2 149 56.4
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 2.2e-28 129.8 137 60.6
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 2.8e-28 129.4 147 55.1
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 3.7e-28 129.0 146 55.5
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 6.3e-28 128.3 127 57.5
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 6.3e-28 128.3 127 56.7
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 6.3e-28 128.3 125 59.2
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 1.4e-27 127.1 127 56.7
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 1.8e-27 126.7 127 56.7
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 1.8e-27 126.7 127 56.7
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 1.8e-27 126.7 127 57.5
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 1.8e-27 126.7 125 56.8
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 2.4e-27 126.3 133 60.9
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 2.4e-27 126.3 133 60.9
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 2.4e-27 126.3 127 57.5
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 2.4e-27 126.3 137 55.5
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 3.1e-27 125.9 137 54.7
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 4.1e-27 125.6 127 55.9
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 4.1e-27 125.6 127 55.9
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 4.1e-27 125.6 129 58.9
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 6.9e-27 124.8 122 59.0
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 6.9e-27 124.8 142 52.1
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 6.9e-27 124.8 142 52.1
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 6.9e-27 124.8 142 52.1
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 6.9e-27 124.8 134 59.7
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 6.9e-27 124.8 127 55.1
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 9.0e-27 124.4 122 59.8
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 1.2e-26 124.0 137 54.7
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.2e-26 124.0 134 57.5
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.2e-26 124.0 125 57.6
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 1.2e-26 124.0 125 59.2
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 1.5e-26 123.6 133 56.4
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.5e-26 123.6 126 57.1
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 2.0e-26 123.2 137 54.7
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 3.4e-26 122.5 133 54.1
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 4.5e-26 122.1 152 50.0
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 4.5e-26 122.1 120 57.5
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 1.0e-25 120.9 134 56.7
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 1.7e-25 120.2 127 58.3
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 1.7e-25 120.2 137 54.7
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.2e-25 119.8 126 55.6
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.2e-25 119.8 126 55.6
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 3.8e-25 119.0 133 54.1
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 5.0e-25 118.6 126 57.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.4e-24 117.1 174 47.7
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 1.4e-24 117.1 126 55.6
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 1.9e-24 116.7 170 47.6
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 3.2e-24 115.9 138 55.1
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 3.2e-24 115.9 126 56.3
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 4.2e-24 115.5 136 53.7
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 4.2e-24 115.5 127 52.8
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 4.2e-24 115.5 134 56.0
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 5.5e-24 115.2 134 53.0
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 9.4e-24 114.4 126 54.8
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.2e-23 114.0 134 55.2
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 1.6e-23 113.6 126 53.2
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 2.1e-23 113.2 126 53.2
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 4.6e-23 112.1 133 54.1
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 6.1e-23 111.7 135 49.6
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.0e-22 110.9 175 44.6
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 3.0e-22 109.4 164 47.6
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 3.9e-22 109.0 136 51.5
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 5.1e-22 108.6 136 51.5
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.1e-22 108.6 136 51.5
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.1e-22 108.6 136 51.5
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 6.7e-22 108.2 129 51.9
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 1.1e-21 107.5 127 52.0
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 1.1e-21 107.5 190 43.2
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 2.0e-21 106.7 126 54.0
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 3.3e-21 105.9 154 49.4
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 9.7e-21 104.4 135 48.1
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.3e-20 104.0 135 48.9
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.2e-20 103.2 135 50.4
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 2.2e-20 103.2 126 50.0
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 3.7e-20 102.4 133 51.1
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 4.8e-20 102.1 135 50.4
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 6.3e-20 101.7 135 47.4
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 3.1e-19 99.4 126 50.8
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 2.0e-18 96.7 59 83.1
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 2.0e-18 96.7 117 52.1
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 5.9e-18 95.1 120 50.8
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 1.3e-17 94.0 150 42.7
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 5.5e-16 88.6 88 59.1
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 4.4e-13 79.0 78 59.0
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.8e-12 76.3 63 61.9
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 1.4e-11 73.9 117 42.7
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 1.4e-11 73.9 53 73.6
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 2.4e-11 73.2 56 66.1
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 2.4e-11 73.2 56 66.1
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 7.0e-11 71.6 63 61.9
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 9.1e-11 71.2 76 55.3
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.2e-10 70.9 60 63.3
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 2.0e-10 70.1 98 49.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.7e-09 67.0 52 69.2
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 9.4e-08 61.2 50 68.0
Potri.001G241100 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.7e-07 59.7 76 52.6
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 1.8e-06 57.0 53 56.6
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 6.7e-06 55.1 104 38.5


User provided reference genes

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