Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12344 Striga asiatica HOM05D021917 ORTHO05D030687 1.3e-210 736.1 363 100.0
SGA_v2.0_scaffold247G44896 Striga asiatica HOM05D021917 ORTHO05D017135 1.6e-19 101.3 99 62.6
SGA_v2.0_scaffold29G12350 Striga asiatica HOM05D021917 ORTHO05D030687 1.4e-18 98.2 99 60.6
SGA_v2.0_scaffold29G12345 Striga asiatica HOM05D042522 ORTHO05D030687 2.6e-09 67.4 40 82.5
CSS0031890 Camellia sinensis var. sinensis HOM05D001825 ORTHO05D010533 4.9e-08 63.2 51 60.8
BolC7t44006H Brassica oleracea HOM05D001825 ORTHO05D010533 8.3e-08 62.4 58 53.4
BolC9t56056H Brassica oleracea HOM05D001825 ORTHO05D010533 8.3e-08 62.4 58 51.7
Nitab4.5_0003823g0090 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.4e-07 61.6 35 77.1
Nitab4.5_0004895g0070 Nicotiana tabacum HOM05D001825 ORTHO05D002336 1.4e-07 61.6 35 77.1
Peaxi162Scf00382g00122 Petunia axillaris HOM05D001825 ORTHO05D002336 1.4e-07 61.6 35 77.1
Ah.11g045010 Amaranthus hybridus HOM05D001825 ORTHO05D002336 1.9e-07 61.2 35 74.3
Ciclev10022447m.g Citrus clementina HOM05D001825 ORTHO05D002336 3.2e-07 60.5 30 86.7
unitig_26.g10265 Utricularia gibba HOM05D001825 ORTHO05D002336 3.2e-07 60.5 34 76.5
VMungo1389G0002 Vigna mungo HOM05D001825 ORTHO05D002336 3.2e-07 60.5 30 86.7
Cfa019793 Carpinus fangiana HOM05D001825 ORTHO05D002336 4.1e-07 60.1 38 68.4
Ciclev10019417m.g Citrus clementina HOM05D001825 ORTHO05D002336 4.1e-07 60.1 30 86.7
Haze_18656 Corylus avellana HOM05D001825 ORTHO05D002336 4.1e-07 60.1 38 68.4
SalBow8G3841 Salvia bowleyana HOM05D001825 ORTHO05D002336 4.1e-07 60.1 34 76.5
SalBow8G4326 Salvia bowleyana HOM05D001825 ORTHO05D002336 5.4e-07 59.7 44 63.6
BcaC04g21416 Brassica carinata HOM05D001825 ORTHO05D002336 7.0e-07 59.3 30 83.3
C09p32040 Brassica napus HOM05D001825 ORTHO05D010533 7.0e-07 59.3 30 83.3
Haze_17456 Corylus avellana HOM05D001825 ORTHO05D002336 7.0e-07 59.3 35 71.4
Gohir.D08G106500 Gossypium hirsutum HOM05D001825 ORTHO05D002336 9.2e-07 58.9 30 83.3
Oeu010777.1 Olea europaea HOM05D001825 ORTHO05D002336 1.2e-06 58.5 62 50.0
A08p27000 Brassica napus HOM05D001825 ORTHO05D002336 2.7e-06 57.4 30 83.3
BraA08t34646Z Brassica rapa HOM05D001825 ORTHO05D002336 2.7e-06 57.4 30 83.3
SGA_v2.0_scaffold298G47651 Striga asiatica HOM05D026199 ORTHO05D030687 2.7e-06 57.4 43 60.5
A07p12640 Brassica napus HOM05D001825 ORTHO05D002336 3.5e-06 57.0 30 80.0
BraA07t29042Z Brassica rapa HOM05D001825 ORTHO05D002336 3.5e-06 57.0 30 80.0
Cfa018613 Carpinus fangiana HOM05D001825 ORTHO05D002336 3.5e-06 57.0 35 71.4
Actinidia14869 Actinidia chinensis HOM05D001825 ORTHO05D002336 4.6e-06 56.6 30 80.0
Actinidia39822 Actinidia chinensis HOM05D001825 ORTHO05D002336 4.6e-06 56.6 28 82.1
Dinv01484 Davidia involucrata HOM05D001825 ORTHO05D002336 4.6e-06 56.6 30 76.7
PGSC0003DMG402015876 Solanum tuberosum HOM05D001825 ORTHO05D002336 4.6e-06 56.6 30 76.7
Lalb_Chr10g0099911 Lupinus albus HOM05D001825 ORTHO05D002336 6.0e-06 56.2 30 76.7
A09p39520 Brassica napus HOM05D001825 ORTHO05D004551 7.8e-06 55.8 30 80.0
C07p18770 Brassica napus HOM05D001825 ORTHO05D002336 7.8e-06 55.8 30 80.0
BolC7t42385H Brassica oleracea HOM05D001825 ORTHO05D002336 7.8e-06 55.8 30 80.0
Gorai.013G081300 Gossypium raimondii HOM05D001825 ORTHO05D002336 7.8e-06 55.8 30 80.0


User provided reference genes

Program Settings