Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 7.0e-92 340.5 160 100.0
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 1.6e-40 169.9 151 58.3
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 5.8e-38 161.4 152 56.6
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 1.7e-37 159.8 150 57.3
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 9.9e-30 134.0 148 50.0
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 4.3e-25 118.6 148 43.2
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 2.1e-24 116.3 152 42.1
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 6.2e-24 114.8 148 41.2
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 3.1e-23 112.5 145 43.4
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 6.9e-23 111.3 154 41.6
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.5e-22 110.2 150 40.7
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.5e-22 110.2 145 44.1
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 3.4e-22 109.0 145 42.1
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.5e-22 108.6 149 42.3
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 5.8e-22 108.2 147 44.2
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 5.8e-22 108.2 149 41.6
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 7.6e-22 107.8 151 41.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.7e-21 106.7 149 42.3
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 2.2e-21 106.3 149 39.6
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 2.2e-21 106.3 146 43.8
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.8e-21 105.5 149 43.0
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 4.9e-21 105.1 147 43.5
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 6.4e-21 104.8 149 38.9
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 8.4e-21 104.4 149 43.0
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 8.4e-21 104.4 149 39.6
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.1e-20 104.0 147 39.5
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.4e-20 103.6 146 39.0
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 1.9e-20 103.2 146 39.0
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 2.5e-20 102.8 154 38.3
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 3.2e-20 102.4 149 38.9
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.2e-20 102.4 147 40.8
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 4.2e-20 102.1 148 37.2
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 4.2e-20 102.1 146 36.3
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 4.2e-20 102.1 152 39.5
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.2e-19 100.5 159 37.7
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.7e-19 99.4 146 38.4
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 3.5e-19 99.0 148 40.5
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 4.6e-19 98.6 157 38.9
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 6.0e-19 98.2 149 37.6
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 7.9e-19 97.8 147 40.1
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 7.9e-19 97.8 146 38.4
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 2.3e-18 96.3 154 37.7
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 3.0e-18 95.9 149 40.9
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 3.9e-18 95.5 144 40.3
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 8.7e-18 94.4 146 37.7
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 8.7e-18 94.4 156 41.0
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 8.7e-18 94.4 154 37.0
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.1e-17 94.0 147 36.7
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.9e-17 93.2 153 35.3
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 4.3e-17 92.0 145 40.0
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 4.3e-17 92.0 146 38.4
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 5.6e-17 91.7 148 37.8
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 1.6e-16 90.1 150 38.0
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 1.6e-16 90.1 156 35.9
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 1.6e-16 90.1 156 35.3
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.8e-16 89.4 161 36.6
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 2.8e-16 89.4 156 35.3
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.4e-15 87.0 158 39.9
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.4e-15 87.0 145 38.6
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.8e-15 86.7 150 35.3
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 2.4e-15 86.3 148 37.8
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.1e-15 85.9 156 36.5
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 4.0e-15 85.5 145 35.9
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 5.3e-15 85.1 156 34.6
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 5.3e-15 85.1 150 38.7
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 5.3e-15 85.1 156 34.0
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 6.9e-15 84.7 145 37.9
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 9.0e-15 84.3 66 57.6
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.2e-14 84.0 145 35.9
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 2.0e-14 83.2 153 37.3
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 2.6e-14 82.8 148 36.5
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 4.5e-14 82.0 154 35.7
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 4.5e-14 82.0 130 36.9
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 5.8e-14 81.6 150 36.0
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 7.6e-14 81.3 144 36.8
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 7.6e-14 81.3 145 37.9
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.0e-13 80.9 145 34.5
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 1.3e-13 80.5 61 59.0
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.3e-13 80.5 155 38.7
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 2.2e-13 79.7 146 34.9
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 2.9e-13 79.3 146 36.3
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 2.9e-13 79.3 148 37.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 6.5e-13 78.2 147 35.4
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 8.4e-13 77.8 157 33.8
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 5.5e-12 75.1 146 34.9
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 5.5e-12 75.1 148 33.1
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 2.7e-11 72.8 152 33.6
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.5e-11 72.4 152 32.9
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 4.6e-11 72.0 147 34.0
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 6.1e-11 71.6 144 35.4
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 2.5e-09 66.2 142 33.1
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.3e-09 65.5 64 48.4
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.3e-08 63.9 145 30.3
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 2.4e-07 59.7 65 43.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 5.3e-07 58.5 149 29.5
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 1.5e-06 57.0 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 3.4e-06 55.8 151 31.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.5e-06 55.5 42 54.8


User provided reference genes

Program Settings