Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 1.2e-151 539.7 247 100.0
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 1.5e-96 356.7 235 69.8
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.9e-96 356.3 231 71.4
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 3.2e-96 355.5 236 70.8
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 7.0e-91 337.8 234 67.1
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.6e-87 325.5 235 64.7
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 7.5e-85 317.8 234 61.5
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 2.2e-84 316.2 223 64.6
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 6.3e-84 314.7 234 61.1
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 6.3e-84 314.7 234 62.0
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.4e-83 313.5 234 60.7
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 1.8e-83 313.2 231 64.9
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 2.4e-83 312.8 234 62.4
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 3.1e-83 312.4 231 64.5
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 4.1e-83 312.0 222 64.9
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 1.2e-82 310.5 223 63.7
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 2.7e-82 309.3 225 63.1
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 7.7e-82 307.8 226 61.9
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.0e-81 307.4 222 63.5
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 2.9e-81 305.8 225 59.6
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 6.6e-81 304.7 235 60.4
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 6.6e-81 304.7 235 60.4
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 6.6e-81 304.7 240 60.0
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.1e-80 303.9 234 61.5
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 2.5e-80 302.8 221 62.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 3.3e-80 302.4 234 59.0
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 4.2e-80 302.0 221 62.4
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 1.6e-79 300.1 235 58.3
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.1e-79 299.7 222 62.6
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.8e-79 299.3 241 58.9
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 3.6e-79 298.9 222 60.8
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 4.7e-79 298.5 225 60.4
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 8.0e-79 297.7 229 60.3
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 8.0e-79 297.7 215 63.7
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.0e-78 297.4 221 62.0
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 2.3e-78 296.2 233 59.2
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.0e-78 295.8 229 59.8
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 6.8e-78 294.7 197 65.5
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 8.9e-78 294.3 258 54.3
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 8.9e-78 294.3 235 56.6
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 1.5e-77 293.5 225 60.0
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 2.0e-77 293.1 215 62.8
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.0e-77 293.1 224 59.8
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 4.4e-77 292.0 186 69.4
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 5.7e-77 291.6 235 56.6
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 5.7e-77 291.6 251 57.0
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 1.7e-76 290.0 254 55.5
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 3.7e-76 288.9 233 55.8
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 3.7e-76 288.9 221 60.2
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 8.3e-76 287.7 226 58.8
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.1e-75 287.3 226 58.4
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 2.4e-75 286.2 208 63.0
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.4e-75 286.2 236 57.2
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 5.4e-75 285.0 227 58.1
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 9.2e-75 284.3 237 53.6
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.6e-74 283.5 226 58.0
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.7e-74 282.7 184 65.8
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 3.5e-74 282.3 236 56.4
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 4.6e-74 282.0 254 54.3
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 5.9e-74 281.6 241 56.4
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.0e-73 280.8 239 54.4
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 1.7e-73 280.0 183 67.8
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.0e-73 278.5 185 64.9
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 8.6e-73 277.7 226 58.4
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 8.6e-73 277.7 216 60.6
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.5e-72 276.9 236 55.5
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 1.5e-72 276.9 235 55.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 1.5e-72 276.9 235 55.7
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 1.9e-72 276.6 241 54.4
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 3.3e-72 275.8 240 55.4
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.2e-71 273.9 186 67.2
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.6e-71 273.5 185 63.8
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.6e-71 273.5 216 60.2
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 2.3e-70 269.6 228 58.3
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.2e-69 267.3 237 57.8
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.5e-69 266.9 186 65.6
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.0e-69 266.5 158 73.4
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.6e-69 266.2 158 73.4
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.6e-69 266.2 158 73.4
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 3.4e-69 265.8 227 56.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 4.4e-69 265.4 229 56.8
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 4.4e-69 265.4 158 73.4
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 5.8e-69 265.0 204 60.3
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 1.3e-68 263.8 235 55.7
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.7e-68 263.5 183 65.6
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 1.7e-68 263.5 252 52.8
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 2.2e-68 263.1 238 55.5
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 2.9e-68 262.7 181 65.7
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 2.9e-68 262.7 181 65.7
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 8.3e-68 261.2 239 55.6
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 7.0e-67 258.1 235 54.5
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.0e-66 256.5 229 55.9
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 1.0e-65 254.2 188 59.6
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 3.0e-65 252.7 202 56.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 3.9e-65 252.3 224 56.2
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 5.0e-65 251.9 186 63.4
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 1.9e-64 250.0 172 66.3
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.9e-64 250.0 172 66.3
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.9e-64 250.0 196 59.2
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 9.5e-64 247.7 210 56.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 8.1e-63 244.6 218 53.2
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 6.8e-62 241.5 203 55.7
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 7.5e-61 238.0 238 50.4
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 9.8e-61 237.7 193 60.6
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.9e-60 236.1 222 53.6
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.3e-57 227.3 125 75.2
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 2.3e-57 226.5 111 84.7
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.3e-56 222.6 199 57.3
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.3e-56 222.6 199 57.3
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 4.3e-56 222.2 141 68.8
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 8.9e-54 214.5 155 58.7
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 5.1e-49 198.7 188 50.5
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 6.0e-42 175.3 226 45.1
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 1.6e-39 167.2 122 59.0
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.9e-35 153.7 120 55.8
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 9.3e-35 151.4 120 55.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.1e-33 145.6 83 71.1
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 8.7e-33 144.8 84 65.5
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.4e-30 137.5 102 55.9
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.5e-16 90.1 170 35.3
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 4.1e-06 56.2 82 39.0


User provided reference genes

Program Settings