Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 3.9e-179 631.3 318 100.0
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 5.2e-107 391.7 289 72.7
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 9.6e-93 344.4 299 63.9
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 5.8e-90 335.1 298 62.4
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 4.9e-89 332.0 288 61.5
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.1e-85 320.9 225 72.9
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 6.3e-76 288.5 254 60.2
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 1.1e-75 287.7 283 56.2
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 1.4e-75 287.3 214 67.3
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 1.8e-75 287.0 286 57.3
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 6.9e-75 285.0 268 59.0
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 4.5e-74 282.3 259 59.1
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 4.5e-74 282.3 235 63.0
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 1.3e-73 280.8 260 57.7
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 2.9e-73 279.6 245 59.2
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 8.5e-73 278.1 204 66.2
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 8.5e-73 278.1 214 64.5
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 1.1e-72 277.7 287 54.4
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 1.1e-72 277.7 317 50.8
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 5.5e-72 275.4 294 52.7
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 1.6e-71 273.9 292 54.5
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 3.6e-71 272.7 247 58.3
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 7.9e-71 271.6 239 57.7
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 1.4e-70 270.8 220 61.8
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 2.3e-70 270.0 217 61.8
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 6.7e-70 268.5 318 49.7
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 6.7e-70 268.5 223 62.3
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 1.5e-69 267.3 231 59.7
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 1.5e-69 267.3 233 58.8
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 3.3e-69 266.2 247 58.7
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.7e-69 265.4 216 62.0
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 1.3e-68 264.2 292 53.8
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.3e-68 264.2 231 61.9
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 1.3e-68 264.2 231 61.9
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 1.3e-68 264.2 170 77.1
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.7e-68 263.8 243 59.7
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 2.2e-68 263.5 219 62.6
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.2e-68 263.5 216 61.6
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 2.8e-68 263.1 313 50.2
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 2.8e-68 263.1 216 61.6
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 2.8e-68 263.1 237 57.8
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.7e-68 262.7 210 62.9
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 6.3e-68 261.9 224 58.5
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 1.1e-67 261.2 202 64.9
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 1.1e-67 261.2 216 61.1
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 1.1e-67 261.2 199 64.8
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 1.2e-66 257.7 192 65.1
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 1.2e-66 257.7 270 54.4
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 1.2e-66 257.7 272 52.6
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 2.0e-66 256.9 303 49.8
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 2.6e-66 256.5 199 62.8
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 2.6e-66 256.5 288 50.3
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 3.4e-66 256.1 269 54.6
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.5e-66 255.8 232 56.9
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 7.7e-66 255.0 284 50.0
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 3.8e-65 252.7 206 60.7
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 5.0e-65 252.3 198 63.1
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 6.5e-65 251.9 203 61.6
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 1.4e-64 250.8 265 52.5
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 1.9e-64 250.4 223 59.6
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 2.5e-64 250.0 264 52.3
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 4.2e-64 249.2 267 51.7
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 7.2e-64 248.4 279 50.2
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 9.4e-64 248.1 179 67.6
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 1.6e-63 247.3 215 58.6
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 6.1e-63 245.4 200 63.0
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 6.1e-63 245.4 216 57.9
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.0e-62 244.6 192 64.1
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.4e-62 244.2 201 60.7
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.4e-62 244.2 266 51.5
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 1.8e-62 243.8 230 55.2
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 2.3e-62 243.4 282 48.2
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 3.0e-62 243.0 202 61.9
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 3.9e-62 242.7 207 60.4
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 5.1e-62 242.3 205 59.5
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 5.1e-62 242.3 250 52.8
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 8.8e-62 241.5 202 61.4
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 8.8e-62 241.5 202 61.4
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 8.8e-62 241.5 280 48.2
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 2.6e-61 240.0 343 44.6
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 3.3e-61 239.6 259 51.0
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 7.4e-61 238.4 202 59.4
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 7.4e-61 238.4 187 62.6
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 1.3e-60 237.7 202 59.4
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 6.3e-60 235.3 202 58.9
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 8.2e-60 235.0 210 59.5
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 3.2e-56 223.0 439 36.9
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 3.2e-56 223.0 184 60.3
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 9.4e-56 221.5 254 48.0
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 2.3e-54 216.9 184 58.7
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 4.8e-52 209.1 177 58.8
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 7.2e-48 195.3 181 51.4
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.6e-47 194.1 189 52.4
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 4.0e-46 189.5 217 52.5
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 2.0e-45 187.2 160 54.4
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 8.3e-44 181.8 161 53.4
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 5.9e-42 175.6 155 58.1
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 1.9e-40 170.6 263 43.7
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 1.6e-39 167.5 286 39.9
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 2.9e-33 146.7 90 73.3
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 1.1e-32 144.8 198 42.4
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 2.5e-32 143.7 174 49.4
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 2.2e-28 130.6 179 43.0
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 6.3e-28 129.0 133 51.9
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 3.5e-26 123.2 171 40.9
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 2.0e-21 107.5 124 53.2
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 3.4e-21 106.7 265 33.6
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 4.4e-21 106.3 197 37.1
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 7.8e-18 95.5 97 52.6
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 8.0e-15 85.5 136 44.9
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 2.0e-13 80.9 114 41.2
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 2.4e-11 73.9 71 52.1
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 1.6e-10 71.2 101 38.6
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 2.3e-09 67.4 83 49.4
Oeu027210.1 Olea europaea HOM05D002956 ORTHO05D009000 2.3e-09 67.4 138 37.7
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 6.6e-09 65.9 89 43.8
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 2.8e-07 60.5 103 40.8


User provided reference genes

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