Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12183 Striga asiatica HOM05D035711 ORTHO05D037777 5.7e-132 474.2 225 100.0
SGA_v2.0_scaffold29G12113 Striga asiatica HOM05D035711 ORTHO05D037777 6.0e-57 224.9 124 91.9
Sed0000150 Sechium edule HOM05D014059 ORTHO05D019015 3.6e-09 66.2 158 33.5
GSVIVG01037363001 Vitis vinifera HOM05D000174 ORTHO05D001526 1.8e-08 63.9 143 30.8
arahy.Tifrunner.gnm1.ann1.DV6FW6 Arachis hypogaea HOM05D000174 ORTHO05D001526 2.0e-07 60.5 226 27.0
Thecc.02G044700 Theobroma cacao HOM05D000174 ORTHO05D001526 3.3e-07 59.7 162 29.0
Manes.08G058500 Manihot esculenta HOM05D000174 ORTHO05D001526 5.7e-07 58.9 163 27.6
Duzib132G0848 Durio zibethinus HOM05D000174 ORTHO05D001526 7.5e-07 58.5 192 29.2
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 7.5e-07 58.5 283 25.4
arahy.Tifrunner.gnm1.ann1.PC1F1T Arachis hypogaea HOM05D000174 ORTHO05D001526 1.7e-06 57.4 143 30.1
MELO3C014059.2 Cucumis melo HOM05D014059 ORTHO05D001526 3.7e-06 56.2 155 26.5
Cc10_g04030 Coffea canephora HOM05D000174 ORTHO05D001526 4.8e-06 55.8 134 33.6
Os06g0727000 Oryza sativa ssp. japonica HOM05D000174 ORTHO05D001526 4.8e-06 55.8 131 29.0
Thecc.09G250700 Theobroma cacao HOM05D008543 ORTHO05D000630 4.8e-06 55.8 56 48.2
TWI75G0649 Tripterygium wilfordii HOM05D008543 ORTHO05D000630 4.8e-06 55.8 227 26.9
Manes.04G008800 Manihot esculenta HOM05D000174 ORTHO05D001526 6.3e-06 55.5 162 27.8
Oeu015527.1 Olea europaea HOM05D000174 ORTHO05D001526 6.3e-06 55.5 134 31.3
Oeu015529.1 Olea europaea HOM05D000174 ORTHO05D001526 6.3e-06 55.5 134 31.3
SGA_v2.0_scaffold79G25559 Striga asiatica HOM05D011325 ORTHO05D000630 6.3e-06 55.5 72 44.4
Duzib248G0614 Durio zibethinus HOM05D000174 ORTHO05D001526 8.2e-06 55.1 191 27.7
Migut.N02393 Erythranthe guttata HOM05D035711 ORTHO05D000630 8.2e-06 55.1 222 26.6


User provided reference genes

Program Settings