Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12157 Striga asiatica HOM05D006374 ORTHO05D006349 2.4e-153 545.4 274 100.0
MSTRG.18477 Avicennia marina HOM05D006374 ORTHO05D006349 6.4e-69 265.0 260 53.1
Migut.D00697 Erythranthe guttata HOM05D006374 ORTHO05D006349 3.0e-66 256.1 293 49.5
Dinv11161 Davidia involucrata HOM05D006374 ORTHO05D006349 8.7e-42 174.9 234 41.0
CSS0045232 Camellia sinensis var. sinensis HOM05D006374 ORTHO05D006349 1.1e-39 167.9 256 39.1
Thecc.03G123000 Theobroma cacao HOM05D006374 ORTHO05D006349 1.2e-38 164.5 245 39.2
Migut.D00695 Erythranthe guttata HOM05D006374 ORTHO05D006349 1.5e-38 164.1 254 39.4
CAN.G328.5 Capsicum annuum HOM05D006374 ORTHO05D006349 4.5e-38 162.5 186 47.3
Cc01_g06860 Coffea canephora HOM05D006374 ORTHO05D006349 9.9e-38 161.4 257 37.0
Potri.015G090800 Populus trichocarpa HOM05D006374 ORTHO05D006349 1.3e-37 161.0 144 54.2
Cc03_g12860 Coffea canephora HOM05D006374 ORTHO05D006349 2.2e-37 160.2 259 37.5
Migut.B01731 Erythranthe guttata HOM05D006374 ORTHO05D006349 2.2e-37 160.2 249 40.2
Sabra15G0112900 Salix brachista HOM05D006374 ORTHO05D006349 3.8e-37 159.5 144 53.5
TAR374G0798 Trochodendron aralioides HOM05D006374 ORTHO05D006349 4.9e-37 159.1 217 40.6
PGSC0003DMG401023161 Solanum tuberosum HOM05D006374 ORTHO05D006349 2.4e-36 156.8 166 47.0
TWI39G0161 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 2.4e-36 156.8 188 44.1
GSVIVG01007539001 Vitis vinifera HOM05D006374 ORTHO05D006349 2.4e-36 156.8 213 40.8
COL.COLO4_28091 Corchorus olitorius HOM05D001045 ORTHO05D001542 3.2e-36 156.4 162 49.4
Manes.14G055266 Manihot esculenta HOM05D006374 ORTHO05D006349 9.3e-36 154.8 222 39.2
Sopen02g012480 Solanum pennellii HOM05D006374 ORTHO05D006349 9.3e-36 154.8 223 38.6
Peaxi162Scf00234g00413 Petunia axillaris HOM05D006374 ORTHO05D006349 1.6e-35 154.1 291 35.4
Oeu032041.1 Olea europaea HOM05D001292 ORTHO05D006349 2.7e-35 153.3 258 38.4
Actinidia33103 Actinidia chinensis HOM05D006374 ORTHO05D006349 2.3e-34 150.2 198 43.4
CiPaw.11G012000 Carya illinoinensis HOM05D006374 ORTHO05D006349 3.9e-34 149.4 235 37.4
FAN25G0911 Fragaria x ananassa HOM05D006374 ORTHO05D006349 5.1e-34 149.1 150 49.3
Nitab4.5_0000205g0050 Nicotiana tabacum HOM05D006374 ORTHO05D006349 6.7e-34 148.7 303 34.0
Oeu025935.3 Olea europaea HOM05D001292 ORTHO05D006349 1.1e-33 147.9 255 38.4
Nn4g22459 Nelumbo nucifera HOM05D006374 ORTHO05D006349 1.5e-33 147.5 218 39.4
QL10p005050 Quercus lobata HOM05D006374 ORTHO05D006349 1.9e-33 147.1 216 39.8
arahy.Tifrunner.gnm1.ann1.EEZ80W Arachis hypogaea HOM05D006374 ORTHO05D006349 2.5e-33 146.7 260 36.9
COL.COLO4_29525 Corchorus olitorius HOM05D006374 ORTHO05D006349 2.5e-33 146.7 149 49.7
FvH4_3g25530 Fragaria vesca HOM05D006374 ORTHO05D006349 3.3e-33 146.4 150 48.7
Rhsim08G0189000 Rhododendron simsii HOM05D006374 ORTHO05D006349 3.3e-33 146.4 256 37.9
Sc16g0003540 Simmondsia chinensis HOM05D006374 ORTHO05D006349 3.3e-33 146.4 225 36.0
RcHm_v2.0_Chr7g0191071 Rosa chinensis HOM05D006374 ORTHO05D006349 4.3e-33 146.0 198 40.9
HanXRQChr16g0497711 Helianthus annuus HOM05D006374 ORTHO05D006349 5.6e-33 145.6 213 38.5
FvH4_5g07530 Fragaria vesca HOM05D006374 ORTHO05D006349 7.4e-33 145.2 141 51.1
FAN18G3707 Fragaria x ananassa HOM05D006374 ORTHO05D006349 7.4e-33 145.2 141 51.1
Lj1g0028093 Lotus japonicus HOM05D006374 ORTHO05D006349 7.4e-33 145.2 243 37.0
FAN13G0453 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.3e-32 144.4 158 47.5
Potri.010G180300 Populus trichocarpa HOM05D006374 ORTHO05D006349 1.3e-32 144.4 196 39.8
FAN08G0738 Fragaria x ananassa HOM05D006374 ORTHO05D006349 1.6e-32 144.1 141 50.4
FAN11G0071 Fragaria x ananassa HOM05D006374 ORTHO05D006349 2.1e-32 143.7 146 48.6
Sabra10G0138300 Salix brachista HOM05D006374 ORTHO05D006349 2.1e-32 143.7 200 41.0
arahy.Tifrunner.gnm1.ann1.6C93RA Arachis hypogaea HOM05D006374 ORTHO05D006349 2.8e-32 143.3 260 36.2
PGSC0003DMG400027413 Solanum tuberosum HOM05D006374 ORTHO05D006349 2.8e-32 143.3 223 37.2
AUR62041397 Chenopodium quinoa HOM05D006374 ORTHO05D006349 3.7e-32 142.9 215 39.5
Eucgr.B00120 Eucalyptus grandis HOM05D006374 ORTHO05D006349 4.8e-32 142.5 174 44.8
Nitab4.5_0003471g0010 Nicotiana tabacum HOM05D006374 ORTHO05D006349 4.8e-32 142.5 316 32.0
ATR0824G075 Amborella trichopoda HOM05D001292 ORTHO05D006349 6.2e-32 142.1 207 37.2
Cfa018891 Carpinus fangiana HOM05D006374 ORTHO05D006349 6.2e-32 142.1 193 41.5
Ca_16088_v3 Cicer arietinum L. HOM05D006374 ORTHO05D006349 6.2e-32 142.1 223 38.1
Hund05647 Selenicereus undatus HOM05D006374 ORTHO05D006349 6.2e-32 142.1 160 45.0
Ciclev10021330m.g Citrus clementina HOM05D006374 ORTHO05D006349 1.1e-31 141.4 217 35.5
ClCG03G003510 Citrullus lanatus HOM05D006374 ORTHO05D006349 1.4e-31 141.0 143 48.3
SEGI_32304 Sequoiadendron giganteum HOM05D006374 ORTHO05D006349 1.8e-31 140.6 188 41.5
Gohir.A13G202800 Gossypium hirsutum HOM05D006374 ORTHO05D006349 2.4e-31 140.2 243 35.4
Solyc11g072220.2 Solanum lycopersicum HOM05D006374 ORTHO05D006349 3.1e-31 139.8 223 36.8
Sopen11g029890 Solanum pennellii HOM05D006374 ORTHO05D006349 3.1e-31 139.8 223 36.8
Duzib205G1366 Durio zibethinus HOM05D006374 ORTHO05D006349 4.0e-31 139.4 146 48.6
Medtr3g075090 Medicago truncatula HOM05D006374 ORTHO05D006349 4.0e-31 139.4 201 36.8
Psat5g141920 Pisum sativum HOM05D006374 ORTHO05D006349 5.3e-31 139.0 257 34.2
SEGI_23287 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 5.3e-31 139.0 140 48.6
SGA_v2.0_scaffold277G46663 Striga asiatica HOM05D006374 ORTHO05D006349 5.3e-31 139.0 247 35.6
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 6.9e-31 138.7 211 37.0
Phvul.009G168700 Phaseolus vulgaris HOM05D006374 ORTHO05D006349 9.0e-31 138.3 141 48.2
Glyma.04G193100 Glycine max HOM05D006374 ORTHO05D006349 1.2e-30 137.9 205 38.5
Gohir.D13G208100 Gossypium hirsutum HOM05D006374 ORTHO05D006349 1.2e-30 137.9 280 33.6
Gorai.013G237200 Gossypium raimondii HOM05D006374 ORTHO05D006349 1.2e-30 137.9 280 33.6
EL10Ac3g05470 Beta vulgaris HOM05D006374 ORTHO05D006349 2.0e-30 137.1 221 37.6
MELO3C002334.2 Cucumis melo HOM05D006374 ORTHO05D006349 2.6e-30 136.7 141 48.2
CsaV3_1G009310 Cucumis sativus L. HOM05D006374 ORTHO05D006349 2.6e-30 136.7 154 45.5
ECA232G1265 Erigeron canadensis HOM05D006374 ORTHO05D006349 2.6e-30 136.7 202 36.1
TWI63G0087 Tripterygium wilfordii HOM05D006374 ORTHO05D006349 2.6e-30 136.7 147 42.9
Gorai.001G059300 Gossypium raimondii HOM05D006374 ORTHO05D006349 3.4e-30 136.3 178 42.7
Atru.chr9.1014 Acer truncatum HOM05D006374 ORTHO05D006349 4.5e-30 136.0 218 37.2
SEGI_20117 Sequoiadendron giganteum HOM05D001292 ORTHO05D006349 4.5e-30 136.0 128 51.6
Prupe.5G156800 Prunus persica HOM05D006374 ORTHO05D006349 5.8e-30 135.6 209 36.8
MSTRG.20819 Avicennia marina HOM05D006374 ORTHO05D006349 1.7e-29 134.0 269 34.9
MD14G1163400 Malus domestica HOM05D006374 ORTHO05D006349 1.9e-28 130.6 202 38.1
CANSAT80G0307 Cannabis sativa HOM05D006374 ORTHO05D006349 2.5e-28 130.2 246 34.1
Thhalv10010584m.g Eutrema salsugineum HOM05D006374 ORTHO05D006349 2.5e-28 130.2 204 36.8
PGR083G0950 Punica granatum HOM05D006374 ORTHO05D006349 2.5e-28 130.2 141 46.1
Aqoxy5G04000 Aquilegia oxysepala HOM05D001292 ORTHO05D006349 3.2e-28 129.8 154 42.9
PSO339G5603 Papaver somniferum HOM05D006374 ORTHO05D006349 4.2e-28 129.4 141 45.4
CARHR157240 Cardamine hirsuta HOM05D006374 ORTHO05D006349 5.5e-28 129.0 200 36.0
VMungo1309G0655 Vigna mungo HOM05D006374 ORTHO05D006349 5.5e-28 129.0 197 36.0
Carub.0005s1466 Capsella rubella HOM05D006374 ORTHO05D006349 1.2e-27 127.9 171 41.5
THA.LOC104798954 Tarenaya hassleriana HOM05D006374 ORTHO05D006349 1.2e-27 127.9 199 36.7
PSO384G4638 Papaver somniferum HOM05D006374 ORTHO05D006349 1.6e-27 127.5 142 45.1
Lsat_1_v5_gn_4_76860 Lactuca sativa HOM05D006374 ORTHO05D006349 2.7e-27 126.7 190 43.7
Os11g0214001 Oryza sativa ssp. japonica HOM05D006374 ORTHO05D006349 3.5e-27 126.3 151 39.7
AT3G48480 Arabidopsis thaliana HOM05D006374 ORTHO05D006349 6.0e-27 125.6 157 42.7
Nitab4.5_0004577g0040 Nicotiana tabacum HOM05D006374 ORTHO05D006349 6.0e-27 125.6 166 42.8
Sed0019471 Sechium edule HOM05D006374 ORTHO05D006349 6.7e-26 122.1 122 50.8
Aa31LG4G17070 Aethionema arabicum HOM05D006374 ORTHO05D006349 1.5e-25 120.9 220 34.1
Lsat_1_v5_gn_9_14500 Lactuca sativa HOM05D006374 ORTHO05D006349 3.3e-25 119.8 197 39.1
Zm00001eb168510 Zea mays HOM05D006374 ORTHO05D006349 3.3e-25 119.8 160 36.9
Haze_07271 Corylus avellana HOM05D006374 ORTHO05D006349 5.7e-25 119.0 157 42.7
AUR62026946 Chenopodium quinoa HOM05D006374 ORTHO05D006349 2.2e-24 117.1 115 50.4
Sp5g13550 Schrenkiella parvula HOM05D006374 ORTHO05D006349 6.3e-24 115.5 207 34.8
EL10Ac4g07621 Beta vulgaris HOM05D006374 ORTHO05D006349 5.3e-23 112.5 227 33.0
AUR62017054 Chenopodium quinoa HOM05D006374 ORTHO05D006349 6.9e-23 112.1 161 37.9
PSO339G4060 Papaver somniferum HOM05D006374 ORTHO05D006349 6.9e-23 112.1 183 39.9
BcaB02g10649 Brassica carinata HOM05D006374 ORTHO05D006349 1.2e-22 111.3 182 38.5
Gohir.A07G051500 Gossypium hirsutum HOM05D006374 ORTHO05D006349 1.2e-22 111.3 156 41.0
Gohir.D07G055900 Gossypium hirsutum HOM05D006374 ORTHO05D006349 2.6e-22 110.2 110 52.7
A06p27690 Brassica napus HOM05D006374 ORTHO05D006349 4.5e-22 109.4 206 34.0
DCAR_029290 Daucus carota HOM05D014044 ORTHO05D006349 2.9e-21 106.7 141 36.9
AUR62040664 Chenopodium quinoa HOM05D006374 ORTHO05D006349 6.5e-21 105.5 148 37.8
AUR62044358 Chenopodium quinoa HOM05D006374 ORTHO05D006349 6.5e-21 105.5 148 37.8
Hund23135 Selenicereus undatus HOM05D006374 ORTHO05D006349 1.4e-20 104.4 151 37.7
BcaC01g02345 Brassica carinata HOM05D006374 ORTHO05D006349 1.9e-20 104.0 159 38.4
DCAR_017413 Daucus carota HOM05D014044 ORTHO05D006349 1.9e-20 104.0 141 36.2
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 5.1e-18 95.9 138 37.7
C03p66330 Brassica napus HOM05D006374 ORTHO05D006349 1.1e-17 94.7 131 41.2
BolC3t18904H Brassica oleracea HOM05D006374 ORTHO05D006349 1.1e-17 94.7 131 41.2
Nitab4.5_0000467g0140 Nicotiana tabacum HOM05D006374 ORTHO05D006349 2.5e-17 93.6 199 35.7
AL5G27890 Arabidopsis lyrata HOM05D006374 ORTHO05D006349 5.7e-17 92.4 117 43.6
PSO384G0777 Papaver somniferum HOM05D006374 ORTHO05D006349 7.4e-17 92.0 140 37.1
DCAR_005456 Daucus carota HOM05D014044 ORTHO05D006349 3.7e-16 89.7 114 38.6
BraA06t25705Z Brassica rapa HOM05D006374 ORTHO05D006349 4.8e-16 89.4 188 30.9
DCAR_018007 Daucus carota HOM05D001292 ORTHO05D006349 2.4e-15 87.0 115 40.0
Cpa.g.sc4.71 Carica papaya HOM05D006374 ORTHO05D006349 9.1e-15 85.1 186 31.2
DCAR_007483 Daucus carota HOM05D006374 ORTHO05D006349 2.0e-14 84.0 185 29.2
DCAR_024275 Daucus carota HOM05D017553 ORTHO05D006349 4.5e-14 82.8 147 32.0
Cc01_g06800 Coffea canephora HOM05D006374 ORTHO05D006349 1.0e-13 81.6 72 45.8
DCAR_005126 Daucus carota HOM05D008184 ORTHO05D015632 2.2e-13 80.5 117 37.6
DCAR_026222 Daucus carota HOM05D001045 ORTHO05D001542 1.4e-12 77.8 114 37.7
DCAR_030104 Daucus carota HOM05D014044 ORTHO05D006349 6.1e-11 72.4 171 28.7
Glyma.06G172800 Glycine max HOM05D006374 ORTHO05D006349 2.6e-09 67.0 70 45.7
DCAR_010912 Daucus carota HOM05D006374 ORTHO05D006349 1.7e-08 64.3 87 39.1
MBI11_g19364_MAGBIO Magnolia biondii HOM05D006374 ORTHO05D006349 5.3e-07 59.3 90 30.0


User provided reference genes

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