Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12137 Striga asiatica HOM05D000045 ORTHO05D009940 7.2e-104 380.6 190 100.0
SGA_v2.0_scaffold35G14139 Striga asiatica HOM05D000045 ORTHO05D009940 1.2e-18 97.4 117 42.7
SGA_v2.0_scaffold36G14482 Striga asiatica HOM05D024854 ORTHO05D009940 1.2e-18 97.4 170 37.6
SGA_v2.0_scaffold109G31088 Striga asiatica HOM05D000045 ORTHO05D009940 2.7e-18 96.3 119 45.4
SGA_v2.0_scaffold4G01942 Striga asiatica HOM05D000045 ORTHO05D009940 2.7e-18 96.3 135 39.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.9e-18 94.7 124 42.7
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.9e-18 94.7 124 42.7
SGA_v2.0_scaffold108G30830 Striga asiatica HOM05D000045 ORTHO05D009940 1.8e-17 93.6 135 37.8
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-17 93.6 124 42.7
SGA_v2.0_scaffold106G30721 Striga asiatica HOM05D000045 ORTHO05D009940 1.1e-16 90.9 76 51.3
SGA_v2.0_scaffold33G13568 Striga asiatica HOM05D027553 ORTHO05D014193 9.7e-16 87.8 190 31.6
SGA_v2.0_scaffold56G20041 Striga asiatica HOM05D000045 ORTHO05D009940 1.3e-15 87.4 134 37.3
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.3e-15 85.1 131 38.2
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 8.2e-15 84.7 131 35.9
SGA_v2.0_scaffold515G52659 Striga asiatica HOM05D000045 ORTHO05D009940 1.8e-14 83.6 129 38.0
SGA_v2.0_scaffold126G33925 Striga asiatica HOM05D000045 ORTHO05D009940 2.4e-14 83.2 134 36.6
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 5.3e-14 82.0 136 34.6
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.1e-14 81.3 112 39.3
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-13 80.9 131 35.9
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.4e-13 79.3 131 32.1
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.4e-13 79.3 131 32.1
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.4e-13 79.3 112 35.7
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 5.9e-13 78.6 140 32.1
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 5.9e-13 78.6 138 33.3
PSO675G7638 Papaver somniferum HOM05D000045 ORTHO05D009940 1.3e-12 77.4 142 33.8
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-12 76.6 153 31.4
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-12 76.6 153 31.4
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 2.9e-12 76.3 138 30.4
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.9e-12 76.3 119 36.1
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 5.0e-12 75.5 72 47.2
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 6.5e-12 75.1 93 45.2
TWI60G0659 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 8.5e-12 74.7 83 39.8
SGA_v2.0_scaffold18G08258 Striga asiatica HOM05D027553 ORTHO05D009940 1.4e-11 73.9 73 47.9
TWI79G1745 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.4e-11 73.9 111 36.9
SGA_v2.0_scaffold29G12202 Striga asiatica HOM05D000045 ORTHO05D000067 7.2e-11 71.6 142 34.5
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 9.4e-11 71.2 65 46.2
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-10 70.5 137 30.7
ECA240G2928 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.9e-10 68.2 101 35.6
PSO591G0277 Papaver somniferum HOM05D000045 ORTHO05D009940 7.9e-10 68.2 139 30.2
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.9e-10 68.2 124 32.3
ECA238G0146 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.0e-09 67.8 72 43.1
TWI59G1432 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.0e-09 67.8 136 33.8
TWI60G1645 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.4e-09 67.4 66 48.5
PSO210G6125 Papaver somniferum HOM05D000045 ORTHO05D009940 2.3e-09 66.6 138 29.0
TWI12G1108 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.3e-09 66.6 126 33.3
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.9e-09 65.9 108 33.3
TWI09G0748 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 3.9e-09 65.9 120 33.3
PSO349G0194 Papaver somniferum HOM05D000045 ORTHO05D000067 5.1e-09 65.5 74 39.2
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.1e-09 65.5 130 28.5
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.1e-09 65.5 130 28.5
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 6.7e-09 65.1 132 31.8
PSO063G3008 Papaver somniferum HOM05D000045 ORTHO05D000067 6.7e-09 65.1 107 31.8
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 1.1e-08 64.3 71 36.6
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 1.1e-08 64.3 71 36.6
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-08 63.9 75 32.0
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.0e-08 63.5 139 29.5
TWI12G1011 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.3e-08 62.8 55 50.9
Rhsim03G0132200 Rhododendron simsii HOM05D000045 ORTHO05D018237 4.4e-08 62.4 65 41.5
MD05G1027500 Malus domestica HOM05D000045 ORTHO05D009940 5.7e-08 62.0 134 32.1
PSO675G0011 Papaver somniferum HOM05D000045 ORTHO05D000067 5.7e-08 62.0 75 32.0
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 7.4e-08 61.6 56 53.6
PSO339G0810 Papaver somniferum HOM05D062982 ORTHO05D009940 7.4e-08 61.6 169 24.3
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.3e-07 60.8 133 30.8
TWI18G1436 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.3e-07 60.8 74 36.5
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 1.7e-07 60.5 75 40.0
SGA_v2.0_scaffold89G27538 Striga asiatica HOM05D027553 ORTHO05D009940 1.7e-07 60.5 57 43.9
PSO135G0126 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-07 60.1 77 36.4
PSO478G2006 Papaver somniferum HOM05D000045 ORTHO05D009940 2.2e-07 60.1 77 36.4
PSO732G0186 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-07 60.1 123 30.9
Rhsim02G0117800 Rhododendron simsii HOM05D000045 ORTHO05D009940 2.2e-07 60.1 65 40.0
SGA_v2.0_scaffold52G19239 Striga asiatica HOM05D022335 ORTHO05D009940 2.2e-07 60.1 73 39.7
SGA_v2.0_scaffold177G39451 Striga asiatica HOM05D027553 ORTHO05D009940 2.8e-07 59.7 113 33.6
SGA_v2.0_scaffold109G31025 Striga asiatica HOM05D000045 ORTHO05D002701 3.7e-07 59.3 65 35.4
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 3.7e-07 59.3 154 27.9
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 4.8e-07 58.9 75 38.7
CANSAT78G0103 Cannabis sativa HOM05D000045 ORTHO05D000067 6.3e-07 58.5 73 34.2
PSO017G4041 Papaver somniferum HOM05D000045 ORTHO05D000067 8.2e-07 58.2 80 36.2
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 8.2e-07 58.2 135 25.9
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 8.2e-07 58.2 136 25.7
CiPaw.10G145800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.1e-06 57.8 135 26.7
FvH4_4g07801 Fragaria vesca HOM05D000045 ORTHO05D000067 1.1e-06 57.8 85 35.3
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 1.1e-06 57.8 93 31.2
Lj1g0022726 Lotus japonicus HOM05D000045 ORTHO05D000067 1.8e-06 57.0 71 39.4
CiPaw.05G005200 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-06 56.2 146 29.5
FvH4_3g17011 Fragaria vesca HOM05D000045 ORTHO05D009940 5.3e-06 55.5 93 34.4
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 7.0e-06 55.1 53 47.2
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 7.0e-06 55.1 136 26.5


User provided reference genes

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