Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12080 Striga asiatica HOM05D009630 ORTHO05D018137 1.8e-147 525.8 244 100.0
SGA_v2.0_scaffold334G49026 Striga asiatica HOM05D009630 ORTHO05D018137 5.8e-21 105.5 170 37.6
SGA_v2.0_scaffold238G43944 Striga asiatica HOM05D009630 ORTHO05D018137 1.3e-20 104.4 159 37.7
SGA_v2.0_scaffold66G22507 Striga asiatica HOM05D009630 ORTHO05D018137 5.1e-17 92.4 59 67.8
SGA_v2.0_scaffold229G43353 Striga asiatica HOM05D009630 ORTHO05D018137 1.5e-16 90.9 142 39.4
SGA_v2.0_scaffold137G35133 Striga asiatica HOM05D009630 ORTHO05D018137 1.9e-16 90.5 172 34.3
CANSAT21G0988 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-12 77.4 258 24.8
CANSAT21G2325 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-11 73.9 257 25.7
CANSAT01G2388 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-11 73.6 238 28.2
SGA_v2.0_scaffold36G14360 Striga asiatica HOM05D009630 ORTHO05D018137 5.4e-11 72.4 157 31.2
CANSAT64G1526 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-10 70.9 238 27.3
CANSAT21G2622 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-10 70.5 251 27.1
CANSAT11G0632 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-10 70.1 255 27.5
CANSAT25G1265 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-10 69.7 191 27.2
CANSAT64G2795 Cannabis sativa HOM05D000003 ORTHO05D000004 6.0e-10 68.9 252 24.2
QL05p017790 Quercus lobata HOM05D000003 ORTHO05D000167 6.0e-10 68.9 208 27.9
CANSAT56G2910 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-09 67.4 168 32.1
CANSAT01G1968 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-09 67.0 279 24.7
CANSAT78G1659 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-09 65.5 245 24.9
CANSAT35G0293 Cannabis sativa HOM05D000003 ORTHO05D000004 8.6e-09 65.1 166 30.1
CANSAT11G0243 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 64.3 270 25.9
CANSAT37G0018 Cannabis sativa HOM05D000003 ORTHO05D000167 1.5e-08 64.3 176 30.7
CANSAT01G2509 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.9 260 23.5
CANSAT25G2443 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.9 185 27.6
CANSAT78G0786 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.9 166 27.7
CANSAT56G1390 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-08 63.5 169 30.2
CANSAT78G1435 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-08 63.5 217 26.3
CANSAT11G1907 Cannabis sativa HOM05D000003 ORTHO05D000167 3.3e-08 63.2 163 27.6
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-08 63.2 186 29.0
CANSAT64G2222 Cannabis sativa HOM05D000003 ORTHO05D000004 4.3e-08 62.8 215 26.5
CANSAT35G0981 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-07 61.2 203 23.6
CANSAT56G0342 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-07 61.2 239 25.5
CANSAT54G2861 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.8 176 27.3
QL10p056321 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-07 60.8 161 27.3
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 60.5 187 27.8
CANSAT80G2437 Cannabis sativa HOM05D000003 ORTHO05D000167 4.7e-07 59.3 151 29.8
CANSAT01G1560 Cannabis sativa HOM05D000003 ORTHO05D000167 6.2e-07 58.9 226 25.2
CANSAT21G0879 Cannabis sativa HOM05D000003 ORTHO05D000004 6.2e-07 58.9 280 22.9
CANSAT64G1068 Cannabis sativa HOM05D000003 ORTHO05D000167 6.2e-07 58.9 159 29.6
CANSAT64G2141 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.8 255 23.5
AUR62008864 Chenopodium quinoa HOM05D000051 ORTHO05D000004 1.4e-06 57.8 251 25.1
CANSAT56G2566 Cannabis sativa HOM05D000003 ORTHO05D000167 2.4e-06 57.0 147 29.3
Sed0016942 Sechium edule HOM05D000003 ORTHO05D000167 4.0e-06 56.2 169 28.4
Sed0021686 Sechium edule HOM05D000003 ORTHO05D000167 4.0e-06 56.2 157 27.4
SGA_v2.0_scaffold52G19020 Striga asiatica HOM05D058966 ORTHO05D046598 5.2e-06 55.8 29 82.8
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.2e-06 55.8 198 23.7
Atru.chr9.663 Acer truncatum HOM05D000003 ORTHO05D000167 6.8e-06 55.5 169 27.2
CANSAT64G2879 Cannabis sativa HOM05D000003 ORTHO05D000004 6.8e-06 55.5 254 24.4
CANSAT35G0288 Cannabis sativa HOM05D000003 ORTHO05D000004 8.9e-06 55.1 110 31.8


User provided reference genes

Program Settings