Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12075 Striga asiatica HOM05D028422 ORTHO05D004107 1.0e-87 326.6 158 100.0
SGA_v2.0_scaffold335G49138 Striga asiatica HOM05D028422 ORTHO05D004107 1.1e-60 236.9 121 92.6
SGA_v2.0_scaffold1G00311 Striga asiatica HOM05D028422 ORTHO05D004107 4.5e-59 231.5 266 50.8
SGA_v2.0_scaffold13G06774 Striga asiatica HOM05D024400 ORTHO05D004107 2.9e-13 79.3 103 34.0
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 1.0e-10 70.9 126 31.0
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 2.3e-10 69.7 122 30.3
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 3.0e-10 69.3 120 30.0
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 6.6e-10 68.2 103 31.1
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 1.5e-09 67.0 98 31.6
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 4.3e-09 65.5 120 30.8
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 5.6e-09 65.1 104 29.8
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.2e-08 63.9 130 26.2
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.1e-08 61.2 139 31.7
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 2.3e-07 59.7 81 35.8
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-07 59.7 127 26.8
CAN.G113.5 Capsicum annuum HOM05D028422 ORTHO05D004107 3.1e-07 59.3 106 31.1
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 6.8e-07 58.2 97 30.9
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-07 58.2 95 33.7
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-07 58.2 95 33.7
Dinv11221 Davidia involucrata HOM05D000017 ORTHO05D012861 1.2e-06 57.4 135 27.4
Dinv17963 Davidia involucrata HOM05D008850 ORTHO05D004107 1.5e-06 57.0 94 34.0
Dinv31502 Davidia involucrata HOM05D025573 ORTHO05D004107 1.5e-06 57.0 48 45.8
HanXRQChr08g0224731 Helianthus annuus HOM05D008850 ORTHO05D004107 1.5e-06 57.0 104 28.8
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 55.5 77 32.5
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 55.5 77 32.5
Dinv37592 Davidia involucrata HOM05D001916 ORTHO05D003272 7.6e-06 54.7 78 32.1
ECA248G0790 Erigeron canadensis HOM05D000038 ORTHO05D000143 9.9e-06 54.3 99 30.3


User provided reference genes

Program Settings