Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 1.5e-237 825.9 428 100.0
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 3.6e-135 485.7 447 63.3
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 4.1e-131 472.2 432 63.9
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 4.5e-130 468.8 406 67.2
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.0e-129 467.6 396 66.2
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 3.9e-129 465.7 449 62.4
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 3.9e-129 465.7 415 63.9
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 2.1e-127 459.9 436 61.7
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 1.4e-126 457.2 388 66.0
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 1.8e-126 456.8 441 61.7
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 3.1e-126 456.1 381 66.9
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 4.0e-126 455.7 444 60.1
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 2.0e-125 453.4 425 62.4
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 2.6e-125 453.0 379 67.8
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 8.3e-124 448.0 450 60.9
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 8.3e-124 448.0 444 60.6
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 1.1e-123 447.6 426 61.0
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 1.1e-123 447.6 415 62.2
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 4.1e-123 445.7 439 60.4
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 5.4e-123 445.3 422 62.8
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.6e-122 443.7 387 63.8
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 1.6e-122 443.7 453 58.9
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 3.5e-122 442.6 352 68.8
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 4.6e-122 442.2 429 59.0
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 4.6e-122 442.2 452 58.2
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 1.3e-121 440.7 441 58.7
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 1.3e-121 440.7 359 68.5
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 1.3e-121 440.7 382 66.0
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 1.7e-121 440.3 411 61.1
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 3.0e-121 439.5 411 61.1
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 3.9e-121 439.1 427 59.7
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 3.9e-121 439.1 425 62.1
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 8.6e-121 438.0 459 56.6
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 1.1e-120 437.6 428 58.9
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 1.1e-120 437.6 428 58.9
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.9e-120 436.8 432 58.8
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 3.3e-120 436.0 450 56.9
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 3.3e-120 436.0 456 57.9
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 1.2e-119 434.1 444 57.0
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 1.2e-119 434.1 385 64.2
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.6e-119 433.7 441 58.3
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.6e-119 433.7 451 59.0
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 2.1e-119 433.3 423 59.6
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 2.8e-119 433.0 395 63.3
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 3.6e-119 432.6 443 59.4
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 3.6e-119 432.6 454 59.3
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 3.6e-119 432.6 370 65.9
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 8.0e-119 431.4 444 57.7
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 1.1e-118 431.0 450 57.1
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.1e-118 431.0 452 58.2
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 1.8e-118 430.3 464 56.5
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 2.3e-118 429.9 449 57.5
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 3.1e-118 429.5 439 57.2
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 6.8e-118 428.3 451 56.8
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 6.8e-118 428.3 440 56.8
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 6.8e-118 428.3 454 57.7
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 4.4e-117 425.6 454 56.8
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 9.8e-117 424.5 431 57.8
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 2.2e-116 423.3 445 58.2
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 2.2e-116 423.3 420 58.3
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 2.9e-116 422.9 377 63.1
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 4.9e-116 422.2 391 61.4
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 6.4e-116 421.8 441 57.4
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 1.4e-115 420.6 431 56.6
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.9e-115 420.2 441 57.1
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 5.4e-115 418.7 419 60.1
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.0e-115 418.3 427 57.8
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.0e-115 418.3 427 57.8
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 7.0e-115 418.3 449 56.6
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 7.0e-115 418.3 437 57.4
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 1.6e-114 417.2 362 65.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 2.7e-114 416.4 444 58.1
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 6.0e-114 415.2 450 56.0
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 1.0e-113 414.5 386 61.7
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.3e-113 414.1 413 59.6
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 3.0e-113 412.9 414 57.5
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 3.3e-112 409.5 430 56.5
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 9.5e-112 407.9 497 52.5
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 3.1e-110 402.9 382 61.0
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 5.2e-110 402.1 388 60.1
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 8.9e-110 401.4 368 62.8
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 8.9e-110 401.4 356 64.0
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 1.3e-108 397.5 437 54.7
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 2.9e-108 396.4 366 63.4
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 1.4e-107 394.0 346 63.9
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 6.0e-106 388.7 409 56.0
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 5.1e-105 385.6 366 60.1
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 6.6e-105 385.2 366 60.1
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 1.5e-104 384.0 376 58.0
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 3.6e-103 379.4 308 67.9
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 8.9e-102 374.8 359 58.8
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 2.0e-101 373.6 342 59.6
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 4.6e-98 362.5 343 60.3
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 8.7e-89 331.6 431 47.1
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 3.4e-85 319.7 359 53.2
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 3.7e-79 299.7 409 48.7
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.0e-76 291.6 292 58.2
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 8.7e-73 278.5 214 68.2
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 7.9e-66 255.4 340 51.8
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 2.8e-63 246.9 362 42.3
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 8.2e-63 245.4 881 29.4
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 1.1e-62 245.0 333 51.1
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 2.0e-61 240.7 247 56.7
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 1.0e-60 238.4 297 45.5
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 2.9e-60 236.9 382 38.5
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 2.5e-56 223.8 449 37.0
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.1e-54 218.4 387 37.0
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.2e-50 204.9 157 72.0
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 4.7e-50 203.0 148 75.7
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 3.0e-49 200.3 311 43.4
Migut.D00733 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.9e-43 181.0 120 79.2
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 3.0e-41 173.7 130 70.8
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.9e-41 173.3 121 74.4
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 2.2e-28 131.0 162 45.1
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 2.9e-28 130.6 230 40.0
CDE02G0544 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 1.2e-21 108.6 82 69.5
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 1.4e-14 85.1 48 87.5
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 1.6e-13 81.6 67 65.7
Lsat_1_v5_gn_9_60420 Lactuca sativa HOM05D001780 ORTHO05D008079 3.9e-12 77.0 46 82.6
MD05G1159200 Malus domestica HOM05D006407 ORTHO05D008079 2.8e-10 70.9 49 69.4
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 8.0e-10 69.3 65 60.0
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 4.1e-06 57.0 179 24.0


User provided reference genes

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