Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold299G47724 Striga asiatica HOM05D000213 ORTHO05D000985 2.5e-53 211.8 107 100.0
SGA_v2.0_scaffold15G07352 Striga asiatica HOM05D000213 ORTHO05D000985 2.1e-23 112.5 98 65.3
MSTRG.2862 Avicennia marina HOM05D000213 ORTHO05D000985 7.6e-10 67.4 111 42.3
Nitab4.5_0000284g0050 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.1e-08 63.5 113 42.5
MSTRG.23722 Avicennia marina HOM05D000213 ORTHO05D000985 1.2e-07 60.1 114 38.6
Nitab4.5_0000929g0030 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.2e-07 60.1 113 38.9
Peaxi162Scf00032g00309 Petunia axillaris HOM05D000213 ORTHO05D000985 1.2e-07 60.1 113 38.9
Duzib187G1286 Durio zibethinus HOM05D000213 ORTHO05D000985 2.1e-07 59.3 117 35.9
CAN.G370.27 Capsicum annuum HOM05D000213 ORTHO05D000985 2.7e-07 58.9 110 38.2
Lsat_1_v5_gn_4_164440 Lactuca sativa HOM05D000213 ORTHO05D000985 3.5e-07 58.5 89 43.8
Sabra07G0042300 Salix brachista HOM05D000213 ORTHO05D000985 3.5e-07 58.5 101 42.6
Migut.H00406 Erythranthe guttata HOM05D000213 ORTHO05D000985 4.6e-07 58.2 98 39.8
PGSC0003DMG400024961 Solanum tuberosum HOM05D000213 ORTHO05D000985 4.6e-07 58.2 103 38.8
VMungo1215G0378 Vigna mungo HOM05D000213 ORTHO05D000985 6.0e-07 57.8 104 41.3
Nitab4.5_0001603g0110 Nicotiana tabacum HOM05D000213 ORTHO05D000985 7.9e-07 57.4 114 38.6
Oeu013239.1 Olea europaea HOM05D000213 ORTHO05D000985 7.9e-07 57.4 98 40.8
Phvul.002G016100 Phaseolus vulgaris HOM05D000213 ORTHO05D000985 7.9e-07 57.4 104 41.3
vmacro17968 Vaccinium macrocarpon HOM05D000213 ORTHO05D000985 7.9e-07 57.4 108 38.0
Medtr5g016610 Medicago truncatula HOM05D000213 ORTHO05D000985 1.0e-06 57.0 101 35.6
Nitab4.5_0000604g0060 Nicotiana tabacum HOM05D000213 ORTHO05D000985 1.0e-06 57.0 113 38.9
Peaxi162Scf00549g00222 Petunia axillaris HOM05D000213 ORTHO05D000985 1.3e-06 56.6 105 38.1
Ciclev10025925m.g Citrus clementina HOM05D000213 ORTHO05D000985 1.8e-06 56.2 104 38.5
PGR004G1084 Punica granatum HOM05D000213 ORTHO05D000985 1.8e-06 56.2 106 38.7
CiPaw.02G007000 Carya illinoinensis HOM05D000213 ORTHO05D000985 2.3e-06 55.8 106 37.7
Potri.007G047400 Populus trichocarpa HOM05D000213 ORTHO05D000985 2.3e-06 55.8 104 40.4
Thecc.01G061900 Theobroma cacao HOM05D000213 ORTHO05D000985 2.3e-06 55.8 118 34.7
Actinidia08281 Actinidia chinensis HOM05D000213 ORTHO05D000985 3.0e-06 55.5 81 38.3
CAN.G1030.38 Capsicum annuum HOM05D000213 ORTHO05D000985 3.0e-06 55.5 82 39.0
MD15G1287300 Malus domestica HOM05D000213 ORTHO05D000985 3.0e-06 55.5 91 45.1
Solyc02g093050.3 Solanum lycopersicum HOM05D000213 ORTHO05D000985 3.0e-06 55.5 104 37.5
TWI73G0677 Tripterygium wilfordii HOM05D000213 ORTHO05D000985 3.0e-06 55.5 107 38.3
Lalb_Chr05g0226261 Lupinus albus HOM05D000213 ORTHO05D000985 3.9e-06 55.1 107 39.3
Sc15g0005900 Simmondsia chinensis HOM05D000213 ORTHO05D000985 3.9e-06 55.1 97 39.2
SGA_v2.0_scaffold28G11803 Striga asiatica HOM05D000213 ORTHO05D000985 3.9e-06 55.1 88 45.5
Gohir.A11G196100 Gossypium hirsutum HOM05D000213 ORTHO05D000985 5.1e-06 54.7 120 35.0
MD02G1177500 Malus domestica HOM05D000213 ORTHO05D000985 6.7e-06 54.3 111 41.4
Rhsim08G0098300 Rhododendron simsii HOM05D000213 ORTHO05D000985 6.7e-06 54.3 74 44.6
RcHm_v2.0_Chr2g0106361 Rosa chinensis HOM05D000213 ORTHO05D000985 6.7e-06 54.3 65 50.8
Sc02g0007490 Simmondsia chinensis HOM05D000213 ORTHO05D000985 6.7e-06 54.3 72 44.4
Sopen02g037620 Solanum pennellii HOM05D000213 ORTHO05D000985 6.7e-06 54.3 104 37.5
TAR381G1275 Trochodendron aralioides HOM05D000213 ORTHO05D000985 6.7e-06 54.3 107 37.4
CiPaw.01G014300 Carya illinoinensis HOM05D000213 ORTHO05D000985 8.7e-06 53.9 114 36.0


User provided reference genes

Program Settings