Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.0e-77 293.5 170 100.0
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 9.3e-18 94.4 66 66.7
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 4.8e-14 82.0 63 69.8
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 4.8e-14 82.0 68 61.8
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 1.1e-13 80.9 65 63.1
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 1.4e-13 80.5 66 57.6
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 1.5e-12 77.0 67 56.7
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 4.5e-12 75.5 68 61.8
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 4.5e-12 75.5 65 61.5
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 5.8e-12 75.1 65 58.5
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 7.6e-12 74.7 71 53.5
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 9.9e-12 74.3 76 53.9
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 1.3e-11 73.9 67 58.2
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 6.4e-11 71.6 66 53.0
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 6.4e-11 71.6 81 51.9
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 6.4e-11 71.6 66 59.1
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 6.4e-11 71.6 66 53.0
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 8.4e-11 71.2 73 56.2
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 1.1e-10 70.9 70 54.3
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.4e-10 70.5 70 54.3
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 1.9e-10 70.1 70 54.3
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 1.9e-10 70.1 67 55.2
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.4e-10 69.7 71 57.7
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 4.2e-10 68.9 87 44.8
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 7.1e-10 68.2 69 55.1
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 7.1e-10 68.2 75 50.7
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 9.3e-10 67.8 70 54.3
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 9.3e-10 67.8 47 66.0
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 9.3e-10 67.8 73 50.7
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.6e-09 67.0 71 54.9
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 1.6e-09 67.0 66 54.5
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 3.5e-09 65.9 67 53.7
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 4.6e-09 65.5 68 54.4
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 6.0e-09 65.1 68 52.9
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 6.0e-09 65.1 71 56.3
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.0e-08 64.3 67 53.7
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.8e-08 63.5 70 51.4
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 2.3e-08 63.2 64 53.1
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 3.0e-08 62.8 67 50.7
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 3.0e-08 62.8 68 51.5
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 3.9e-08 62.4 49 63.3
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 5.1e-08 62.0 66 54.5
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 6.7e-08 61.6 82 42.7
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 6.7e-08 61.6 66 50.0
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 8.7e-08 61.2 64 50.0
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 1.5e-07 60.5 74 52.7
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.5e-07 60.5 78 42.3
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 1.9e-07 60.1 71 52.1
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 1.9e-07 60.1 68 48.5
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 2.5e-07 59.7 76 48.7
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 9.6e-07 57.8 76 47.4
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 9.6e-07 57.8 76 47.4
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 9.6e-07 57.8 64 51.6
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 9.6e-07 57.8 73 50.7
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 1.3e-06 57.4 46 60.9
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 1.3e-06 57.4 88 45.5
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 1.3e-06 57.4 76 46.1
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 1.3e-06 57.4 50 60.0
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 1.3e-06 57.4 50 60.0
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 2.1e-06 56.6 70 48.6
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 2.1e-06 56.6 75 44.0


User provided reference genes

Program Settings