Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 8.8e-66 253.4 126 100.0
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 5.6e-52 207.6 126 83.3
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 3.1e-50 201.8 126 81.7
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 4.9e-48 194.5 126 78.6
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 4.9e-48 194.5 126 78.6
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 6.4e-48 194.1 126 78.6
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 8.3e-48 193.7 127 79.5
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 4.1e-47 191.4 126 78.6
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 7.0e-47 190.7 126 77.8
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 3.5e-46 188.3 122 81.1
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 4.6e-46 188.0 131 75.6
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 6.0e-46 187.6 129 76.7
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 7.8e-46 187.2 126 75.4
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.7e-45 186.0 131 71.8
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 1.7e-45 186.0 116 80.2
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 2.3e-45 185.7 130 74.6
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 2.3e-45 185.7 126 74.6
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 5.0e-45 184.5 126 73.8
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 8.6e-45 183.7 128 75.8
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 1.5e-44 183.0 129 75.2
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 1.5e-44 183.0 129 75.2
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 2.5e-44 182.2 131 74.8
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 3.3e-44 181.8 130 74.6
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 4.3e-44 181.4 129 74.4
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 4.3e-44 181.4 132 72.7
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 4.3e-44 181.4 127 74.8
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 5.6e-44 181.0 132 70.5
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 7.3e-44 180.6 132 70.5
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 7.3e-44 180.6 100 86.0
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 9.5e-44 180.3 126 71.4
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 1.2e-43 179.9 130 73.8
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 1.2e-43 179.9 130 70.0
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 2.1e-43 179.1 130 73.1
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 2.8e-43 178.7 128 71.9
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 1.1e-42 176.8 125 71.2
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.4e-42 176.4 126 69.0
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 1.4e-42 176.4 131 69.5
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 1.4e-42 176.4 131 72.5
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 1.8e-42 176.0 135 71.1
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 1.8e-42 176.0 129 73.6
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 1.8e-42 176.0 131 69.5
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 2.3e-42 175.6 125 73.6
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 2.3e-42 175.6 126 72.2
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 4.0e-42 174.9 121 76.9
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 5.2e-42 174.5 126 74.6
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 5.2e-42 174.5 100 81.0
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 6.8e-42 174.1 130 70.0
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 1.2e-41 173.3 129 72.9
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 3.4e-41 171.8 100 80.0
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 4.4e-41 171.4 129 72.1
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 4.4e-41 171.4 129 69.0
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 7.5e-41 170.6 98 81.6
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 9.8e-41 170.2 125 73.6
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 1.3e-40 169.9 128 70.3
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 2.2e-40 169.1 125 72.8
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 2.2e-40 169.1 124 74.2
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 3.7e-40 168.3 125 72.0
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 3.7e-40 168.3 102 82.4
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 3.7e-40 168.3 131 70.2
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 3.7e-40 168.3 123 70.7
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 4.9e-40 167.9 117 73.5
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 6.4e-40 167.5 113 75.2
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 6.4e-40 167.5 95 81.1
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 8.3e-40 167.2 107 78.5
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 1.1e-39 166.8 126 72.2
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 1.4e-39 166.4 129 69.8
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 3.2e-39 165.2 107 77.6
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 3.2e-39 165.2 110 74.5
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 7.1e-39 164.1 121 70.2
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 2.1e-38 162.5 96 81.2
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 2.1e-38 162.5 131 67.9
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 7.8e-38 160.6 127 66.1
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 1.3e-37 159.8 100 80.0
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.3e-37 159.8 126 69.8
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 3.0e-37 158.7 114 68.4
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 3.9e-37 158.3 120 70.8
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 8.6e-37 157.1 121 70.2
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 8.6e-37 157.1 121 70.2
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 1.9e-36 156.0 89 87.6
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 4.3e-36 154.8 118 69.5
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 5.6e-36 154.5 126 69.0
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 8.1e-35 150.6 85 83.5
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 3.1e-34 148.7 124 65.3
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 2.0e-33 146.0 85 76.5
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 6.0e-30 134.4 166 49.4
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.3e-29 133.3 94 68.1
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 5.1e-29 131.3 88 69.3
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 9.6e-28 127.1 85 72.9
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.1e-27 125.9 106 65.1
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 1.2e-25 120.2 90 70.0
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 5.8e-25 117.9 88 72.7
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 6.4e-24 114.4 97 67.0
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 3.1e-18 95.5 98 62.2
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 2.6e-17 92.4 91 58.2
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 2.2e-16 89.4 86 60.5
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 1.4e-15 86.7 84 58.3
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.9e-15 86.3 81 63.0
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 4.2e-15 85.1 81 60.5
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 5.4e-15 84.7 81 60.5
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 1.6e-14 83.2 41 85.4
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 4.6e-14 81.6 80 60.0
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.1e-13 78.2 83 60.2
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 6.6e-13 77.8 86 57.0
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.9e-12 76.3 56 62.5
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 2.8e-11 72.4 48 75.0
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 4.9e-08 61.6 42 66.7


User provided reference genes

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