Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 1.6e-231 806.6 725 100.0
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 9.6e-64 249.2 703 67.0
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.8e-62 245.0 706 67.8
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.6e-55 221.9 659 68.7
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 4.0e-54 217.2 186 60.8
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 1.5e-53 215.3 771 62.5
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 3.5e-50 204.1 712 64.7
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 3.9e-49 200.7 699 65.1
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 2.5e-48 198.0 698 65.0
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.6e-47 195.3 695 63.7
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 4.0e-46 190.7 201 52.7
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 9.0e-46 189.5 672 67.1
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 2.6e-45 188.0 658 65.7
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 3.4e-45 187.6 674 64.5
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 1.3e-44 185.7 177 57.1
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 2.2e-44 184.9 658 66.9
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 4.2e-43 180.6 691 63.4
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 6.1e-42 176.8 654 66.4
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 7.9e-42 176.4 160 57.5
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 3.0e-41 174.5 667 62.5
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 3.9e-41 174.1 181 52.5
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.1e-40 172.6 708 62.0
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.3e-40 171.0 327 49.8
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 3.3e-40 171.0 125 68.0
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 5.7e-40 170.2 684 59.6
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 7.4e-40 169.9 647 64.1
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.3e-39 169.1 232 41.8
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.3e-39 169.1 672 59.2
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.3e-39 169.1 658 65.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.6e-39 168.7 675 63.7
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 1.6e-39 168.7 194 49.5
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 2.8e-39 167.9 662 66.3
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 2.8e-39 167.9 671 64.4
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 4.8e-39 167.2 670 63.4
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 6.3e-39 166.8 659 65.9
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 6.3e-39 166.8 671 64.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 1.1e-38 166.0 135 62.2
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.4e-38 165.6 187 49.7
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 1.8e-38 165.2 684 60.1
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 2.4e-38 164.9 663 64.9
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 2.4e-38 164.9 671 64.7
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 3.1e-38 164.5 650 65.5
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 4.1e-38 164.1 146 59.6
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 6.9e-38 163.3 151 57.6
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.2e-37 162.5 187 49.2
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.2e-37 162.5 174 50.6
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 2.6e-37 161.4 673 63.3
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 4.5e-37 160.6 118 68.6
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 5.9e-37 160.2 667 63.9
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 2.2e-36 158.3 680 62.9
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.2e-36 158.3 139 61.2
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.8e-36 157.5 680 62.9
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 5.0e-36 157.1 161 54.0
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 5.0e-36 157.1 147 54.4
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 8.5e-36 156.4 624 67.6
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 8.5e-36 156.4 652 64.3
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 1.9e-35 155.2 189 47.6
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.2e-35 153.3 273 52.7
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 7.2e-35 153.3 670 58.5
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 9.4e-35 152.9 152 52.6
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 9.4e-35 152.9 146 53.4
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 9.4e-35 152.9 146 53.4
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 1.6e-34 152.1 145 53.8
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 1.6e-34 152.1 145 53.8
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.1e-34 151.8 151 55.0
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 2.1e-34 151.8 145 53.8
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.7e-34 151.4 145 54.5
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 6.1e-34 150.2 146 54.1
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 7.9e-34 149.8 138 57.2
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 1.0e-33 149.4 159 49.1
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.8e-33 148.7 158 48.7
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 2.3e-33 148.3 144 54.9
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 2.3e-33 148.3 153 52.9
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 3.0e-33 147.9 690 61.9
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 6.7e-33 146.7 651 62.8
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 1.1e-32 146.0 628 62.9
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 1.5e-32 145.6 147 52.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.5e-32 145.6 147 52.4
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 2.0e-32 145.2 620 66.3
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 2.5e-32 144.8 149 53.7
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 8.2e-31 139.8 128 57.0
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 8.2e-31 139.8 155 48.4
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 8.2e-31 139.8 155 48.4
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 1.1e-30 139.4 139 53.2
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 5.3e-30 137.1 128 56.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.4e-29 134.4 117 57.3
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 4.5e-29 134.0 158 46.8
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 5.9e-29 133.7 104 64.4
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 7.7e-29 133.3 662 62.2
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 2.9e-28 131.3 149 48.3
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 5.0e-28 130.6 195 35.9
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 1.4e-27 129.0 146 45.9
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 1.9e-27 128.6 158 45.6
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 9.4e-27 126.3 94 69.1
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.7e-26 124.0 137 48.2
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 4.7e-26 124.0 173 38.7
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.3e-25 121.7 141 45.4
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.1e-25 120.6 103 58.3
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.4e-22 111.7 84 70.2
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 5.3e-22 110.5 93 59.1
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 5.9e-21 107.1 82 62.2
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 2.9e-20 104.8 100 56.0
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 2.5e-19 101.7 155 40.6
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 6.1e-18 97.1 174 34.5
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 6.1e-18 97.1 174 34.5
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 8.8e-17 93.2 166 35.5
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 3.3e-16 91.3 161 36.0
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 8.2e-15 86.7 98 51.0
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 8.2e-15 86.7 98 51.0
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.1e-14 86.3 69 62.3
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 2.0e-13 82.0 65 61.5
CDE07G1407 Ceratophyllum demersum HOM05D000186 ORTHO05D006806 5.5e-11 73.9 113 61.1
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.2e-10 72.8 70 54.3
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 1.6e-10 72.4 69 59.4
Glyma.18G252502 Glycine max HOM05D026316 ORTHO05D029154 3.6e-10 71.2 110 71.8
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.8e-09 67.0 50 70.0
Nitab4.5_0027863g0010 Nicotiana tabacum HOM05D000021 ORTHO05D000010 2.0e-08 65.5 119 75.6


User provided reference genes

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