Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 4.5e-52 207.6 101 100.0
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 5.7e-39 164.1 99 81.8
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.0e-37 156.8 92 79.3
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 9.0e-37 156.8 92 79.3
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 1.4e-34 149.4 87 81.6
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 1.6e-30 136.0 103 66.0
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 4.8e-30 134.4 86 72.1
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 2.4e-29 132.1 88 71.6
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 4.1e-29 131.3 81 74.1
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 6.9e-29 130.6 85 71.8
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 9.0e-29 130.2 95 66.3
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.2e-28 129.8 81 72.8
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.2e-28 129.8 86 69.8
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 2.0e-28 129.0 84 70.2
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 2.6e-28 128.6 82 74.4
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 4.5e-28 127.9 88 69.3
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 5.9e-28 127.5 84 70.2
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 1.0e-27 126.7 79 74.7
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 1.0e-27 126.7 79 74.7
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 3.8e-27 124.8 81 71.6
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 8.5e-27 123.6 73 80.8
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 1.1e-26 123.2 84 67.9
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 1.1e-26 123.2 91 63.7
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 1.4e-26 122.9 82 67.1
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.4e-26 122.9 78 71.8
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 1.9e-26 122.5 82 65.9
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 4.2e-26 121.3 84 65.5
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 4.2e-26 121.3 79 70.9
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 7.2e-26 120.6 86 66.3
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 7.2e-26 120.6 79 68.4
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 7.2e-26 120.6 79 69.6
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 7.2e-26 120.6 78 71.8
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 9.4e-26 120.2 82 65.9
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 1.2e-25 119.8 81 67.9
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 2.1e-25 119.0 79 72.2
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 3.6e-25 118.2 84 63.1
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 3.6e-25 118.2 86 64.0
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 3.6e-25 118.2 79 65.8
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 4.6e-25 117.9 78 67.9
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 4.6e-25 117.9 79 65.8
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 7.9e-25 117.1 82 62.2
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 7.9e-25 117.1 82 65.9
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 1.0e-24 116.7 82 65.9
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 1.0e-24 116.7 79 69.6
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 1.0e-24 116.7 78 67.9
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 1.0e-24 116.7 84 61.9
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 1.0e-24 116.7 80 67.5
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.8e-24 115.9 81 63.0
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 1.8e-24 115.9 82 64.6
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 2.3e-24 115.5 81 63.0
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 2.3e-24 115.5 81 63.0
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 2.3e-24 115.5 81 63.0
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 3.0e-24 115.2 79 64.6
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 3.9e-24 114.8 81 63.0
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 3.9e-24 114.8 81 63.0
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 6.7e-24 114.0 81 63.0
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 6.7e-24 114.0 81 67.9
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 6.7e-24 114.0 79 67.1
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 8.8e-24 113.6 79 67.1
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 8.8e-24 113.6 84 60.7
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 1.8e-21 105.9 73 67.1
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 5.3e-21 104.4 92 56.5
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 3.4e-20 101.7 83 61.4
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 5.9e-20 100.9 96 55.2
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 1.7e-19 99.4 89 53.9
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.7e-19 99.4 82 57.3
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 5.0e-19 97.8 80 60.0
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 8.5e-19 97.1 81 59.3
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 2.5e-18 95.5 82 56.1
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 5.5e-18 94.4 82 54.9
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.4e-16 89.7 61 63.9
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 1.8e-13 79.3 55 61.8
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 2.0e-12 75.9 82 48.8
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 5.9e-12 74.3 48 66.7
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 7.5e-07 57.4 79 38.0
FAN12G0891 Fragaria x ananassa HOM05D007940 ORTHO05D010046 2.2e-06 55.8 36 69.4
FAN24G2461 Fragaria x ananassa HOM05D000188 ORTHO05D000362 2.2e-06 55.8 36 69.4
FAN03G3294 Fragaria x ananassa HOM05D004346 ORTHO05D005153 2.8e-06 55.5 35 71.4
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 3.7e-06 55.1 64 48.4


User provided reference genes

Program Settings