Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 5.9e-94 347.4 164 100.0
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 3.6e-67 258.5 164 75.0
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 7.0e-63 244.2 164 73.8
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.6e-62 243.0 163 73.0
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 3.5e-62 241.9 164 73.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 2.9e-53 212.2 160 62.5
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 1.6e-51 206.5 156 61.5
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 2.1e-51 206.1 144 65.3
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 2.8e-51 205.7 163 61.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 3.6e-51 205.3 153 64.1
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 6.1e-51 204.5 165 61.8
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 6.8e-50 201.1 138 64.5
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 8.9e-50 200.7 135 67.4
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 2.0e-49 199.5 153 61.4
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 2.6e-49 199.1 146 61.6
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 7.5e-49 197.6 163 61.3
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.3e-48 196.8 157 61.1
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 4.9e-48 194.9 150 64.0
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 6.3e-48 194.5 179 57.0
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 6.3e-48 194.5 150 63.3
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 2.4e-47 192.6 153 62.7
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.4e-47 192.6 157 60.5
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 7.0e-47 191.0 148 58.8
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 9.2e-47 190.7 155 58.1
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 9.2e-47 190.7 161 56.5
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.6e-46 189.9 145 60.7
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 2.7e-46 189.1 152 59.2
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 3.5e-46 188.7 161 55.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 7.8e-46 187.6 127 67.7
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 7.8e-46 187.6 145 60.0
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 7.8e-46 187.6 133 62.4
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.0e-45 187.2 154 60.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.0e-45 187.2 152 59.2
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.0e-45 187.2 148 58.1
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.3e-45 186.8 151 58.3
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.7e-45 186.4 149 57.7
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 2.9e-45 185.7 145 59.3
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 3.8e-45 185.3 143 60.8
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 6.6e-45 184.5 145 59.3
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 6.6e-45 184.5 131 62.6
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.6e-45 184.5 139 59.0
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 8.6e-45 184.1 152 55.3
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 8.6e-45 184.1 141 61.0
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 8.6e-45 184.1 151 57.6
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 1.1e-44 183.7 155 57.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.5e-44 183.3 153 56.2
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.5e-44 183.3 143 60.8
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.9e-44 183.0 150 60.0
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.9e-44 183.0 152 57.2
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.5e-44 182.6 152 53.3
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.5e-44 182.6 139 58.3
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 3.3e-44 182.2 152 53.9
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 3.3e-44 182.2 147 58.5
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 7.3e-44 181.0 149 55.0
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.3e-44 181.0 153 55.6
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 7.3e-44 181.0 158 55.1
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 9.5e-44 180.6 153 55.6
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.2e-43 180.3 136 58.8
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.6e-43 179.9 140 57.9
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 1.6e-43 179.9 132 61.4
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.6e-43 179.9 133 60.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.6e-43 179.9 152 52.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 2.1e-43 179.5 141 56.0
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.1e-43 179.5 135 58.5
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.1e-43 179.5 133 61.7
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 2.8e-43 179.1 136 59.6
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 3.6e-43 178.7 152 52.6
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 4.7e-43 178.3 152 54.6
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 4.7e-43 178.3 141 55.3
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 4.7e-43 178.3 138 59.4
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 6.1e-43 177.9 132 60.6
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 6.1e-43 177.9 144 57.6
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 8.0e-43 177.6 142 54.9
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 8.0e-43 177.6 141 55.3
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.0e-42 177.2 126 61.9
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 1.0e-42 177.2 144 56.9
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 3.0e-42 175.6 142 54.2
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 3.0e-42 175.6 142 54.2
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 3.0e-42 175.6 134 59.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 3.0e-42 175.6 153 52.9
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 4.0e-42 175.3 142 54.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 4.0e-42 175.3 135 57.0
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 6.8e-42 174.5 158 51.3
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 1.3e-40 170.2 160 51.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.4e-39 166.0 151 51.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 3.2e-39 165.6 151 51.0
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 2.7e-38 162.5 170 52.4
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.3e-37 160.2 126 59.5
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 8.6e-37 157.5 141 53.2
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.9e-36 156.4 134 54.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 4.3e-36 155.2 167 47.3
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 9.5e-36 154.1 137 53.3
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 2.3e-34 149.4 149 49.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 8.3e-32 141.0 118 58.5
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.4e-31 140.2 101 61.4
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 1.6e-30 136.7 176 43.8
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.3e-29 133.7 104 56.7
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 3.0e-29 132.5 162 45.7
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 5.0e-29 131.7 108 53.7
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.5e-28 130.2 158 46.2
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.5e-28 129.4 93 65.6
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.5e-25 120.2 182 36.3
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 5.8e-25 118.2 82 62.2
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 1.7e-24 116.7 125 40.8
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 1.2e-22 110.5 131 39.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.7e-22 109.4 136 39.0
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.7e-21 106.7 75 65.3
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 5.1e-21 105.1 223 30.5
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.1e-19 99.8 100 53.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.7e-16 90.1 131 35.9
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 4.2e-15 85.5 143 36.4
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 6.0e-14 81.6 98 39.8
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 5.1e-13 78.6 63 55.6
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 3.3e-12 75.9 75 50.7
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 2.4e-10 69.7 127 30.7
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 3.8e-08 62.4 117 35.0
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 6.4e-08 61.6 66 45.5
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.4e-07 60.5 45 66.7


User provided reference genes

Program Settings