Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.5e-300 1035.4 517 100.0
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 3.0e-237 825.1 537 80.4
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 6.1e-230 800.8 518 77.4
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 6.1e-230 800.8 518 77.4
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 5.0e-224 781.2 495 78.8
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 1.2e-222 776.5 500 77.8
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 5.7e-220 767.7 512 75.4
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 1.7e-219 766.1 511 75.3
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 2.2e-219 765.8 529 73.9
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.8e-219 765.4 515 75.1
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 3.7e-219 765.0 505 76.4
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 4.8e-219 764.6 504 76.2
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 1.1e-218 763.5 505 76.2
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 4.1e-218 761.5 506 75.9
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 4.1e-218 761.5 513 75.0
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 7.0e-218 760.8 513 75.0
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.5e-217 758.4 505 75.2
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 4.5e-217 758.1 500 75.6
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 7.7e-217 757.3 524 74.8
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.0e-216 756.9 505 75.0
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.0e-216 756.9 503 75.0
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 5.0e-216 754.6 506 74.5
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 8.5e-216 753.8 491 76.6
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 5.5e-215 751.1 503 74.0
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 7.2e-215 750.7 503 74.4
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 8.0e-214 747.3 501 74.9
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 1.0e-213 746.9 501 74.9
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 1.8e-213 746.1 513 73.9
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 3.0e-213 745.3 497 74.0
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 3.0e-213 745.3 522 72.2
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 6.8e-213 744.2 501 74.3
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 8.8e-213 743.8 512 72.5
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 8.8e-213 743.8 506 73.7
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 1.5e-212 743.0 501 74.5
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 2.0e-212 742.7 503 74.2
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 3.4e-212 741.9 497 74.6
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 4.4e-212 741.5 508 73.0
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 1.3e-211 740.0 502 73.9
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 1.3e-211 740.0 510 72.7
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.3e-211 740.0 511 74.2
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 2.8e-211 738.8 505 73.9
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 3.7e-211 738.4 510 72.5
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 3.7e-211 738.4 490 76.1
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 6.3e-211 737.6 498 75.3
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 2.4e-210 735.7 498 73.9
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 2.0e-209 732.6 507 73.2
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 3.5e-209 731.9 522 71.6
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 4.5e-209 731.5 502 73.9
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 1.0e-208 730.3 511 73.2
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 1.0e-208 730.3 500 73.2
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 1.3e-208 729.9 509 72.5
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 3.8e-208 728.4 507 73.2
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.8e-208 728.4 510 72.7
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 1.1e-207 726.9 497 72.8
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 1.1e-207 726.9 509 71.9
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 1.9e-207 726.1 490 74.3
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.5e-207 725.7 507 72.8
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 3.3e-207 725.3 497 74.6
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 5.6e-207 724.5 501 73.1
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 5.6e-207 724.5 501 73.1
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 7.3e-207 724.2 499 73.3
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.2e-206 723.4 491 72.9
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 2.1e-206 722.6 499 72.1
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 3.6e-206 721.8 520 71.5
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 4.7e-206 721.5 500 72.6
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 6.1e-206 721.1 466 77.5
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 8.0e-206 720.7 502 72.9
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 4.0e-205 718.4 498 72.7
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 8.9e-205 717.2 500 71.8
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.2e-204 716.8 494 72.7
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.5e-204 716.5 500 71.2
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 2.0e-204 716.1 500 72.2
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 2.6e-204 715.7 500 71.6
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 3.4e-204 715.3 497 72.4
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.4e-204 715.3 500 71.6
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 3.4e-204 715.3 542 69.2
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 5.7e-204 714.5 501 71.9
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 5.7e-204 714.5 498 72.5
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.3e-203 713.4 505 71.5
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 1.7e-203 713.0 504 71.2
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 2.9e-203 712.2 500 71.6
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 2.9e-203 712.2 504 71.0
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 2.9e-203 712.2 504 71.0
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 3.7e-203 711.8 500 70.8
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 3.7e-203 711.8 501 71.1
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 1.4e-202 709.9 494 72.1
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 1.8e-202 709.5 508 71.1
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 2.4e-202 709.1 499 71.1
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 5.4e-202 708.0 514 70.0
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 5.4e-202 708.0 500 71.0
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 7.0e-202 707.6 495 71.7
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 2.0e-201 706.1 535 67.9
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 3.5e-201 705.3 505 70.9
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 4.6e-201 704.9 501 70.7
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 3.9e-200 701.8 505 71.1
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 5.0e-200 701.4 505 69.7
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 3.3e-199 698.7 510 70.6
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 6.2e-198 694.5 498 69.5
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 1.8e-197 693.0 511 70.6
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 2.0e-196 689.5 496 69.4
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 3.4e-196 688.7 495 72.1
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.4e-194 682.6 506 69.4
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 1.1e-191 673.7 492 67.5
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 5.6e-191 671.4 499 66.9
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 3.4e-188 662.1 567 62.3
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 1.3e-187 660.2 509 65.2
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 8.3e-187 657.5 511 65.2
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 1.1e-186 657.1 515 66.6
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 6.0e-185 651.4 518 64.3
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 7.8e-185 651.0 589 58.6
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 3.0e-184 649.0 512 67.2
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 7.3e-183 644.4 518 66.2
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 1.8e-181 639.8 508 64.4
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 2.4e-181 639.4 503 65.8
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 2.4e-181 639.4 510 67.1
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 2.4e-181 639.4 517 61.7
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 3.1e-181 639.0 499 65.9
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 1.3e-179 633.6 512 62.1
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 6.4e-179 631.3 480 67.3
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 1.4e-178 630.2 499 64.5
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 5.4e-178 628.2 507 65.1
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 2.8e-174 615.9 498 62.9
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 6.2e-174 614.8 499 62.3
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 5.2e-173 611.7 520 64.0
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.5e-172 610.1 420 74.3
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 1.5e-159 567.0 467 61.2
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 6.4e-155 551.6 514 56.0
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 1.1e-149 534.3 505 55.6
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.5e-148 528.9 355 75.2
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 4.9e-147 525.4 394 69.0
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 7.1e-146 521.5 412 68.0
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.0e-144 516.2 362 72.7
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 5.1e-144 515.4 371 72.5
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 4.3e-143 512.3 409 66.0
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 4.3e-143 512.3 373 70.8
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 4.1e-141 505.8 418 63.2
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 2.2e-139 500.0 563 51.2
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 5.0e-139 498.8 377 69.2
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.5e-127 460.7 299 76.9
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.1e-121 440.3 419 59.4
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 1.8e-120 437.2 299 72.2
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 1.1e-119 434.5 479 50.1
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.8e-118 429.9 279 77.4
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.1e-113 412.1 295 70.2
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 4.5e-108 396.0 290 71.0
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.1e-85 319.7 249 68.3
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.7e-84 317.0 184 83.7
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 5.2e-80 302.8 486 37.4
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.9e-77 294.3 262 63.0
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.9e-75 286.6 183 75.4
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 2.4e-69 267.3 219 68.0
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 3.0e-67 260.4 202 65.3
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 1.6e-57 228.0 228 55.3
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 1.3e-54 218.4 132 80.3
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 2.9e-54 217.2 240 51.7
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 9.3e-53 212.2 140 75.0
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 6.0e-52 209.5 133 73.7
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 1.5e-50 204.9 131 77.1
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 2.6e-47 194.1 148 68.2
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 1.6e-44 184.9 114 78.9
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 3.0e-43 180.6 272 46.3
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 3.1e-40 170.6 90 84.4
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 3.1e-40 170.6 90 84.4
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 6.9e-40 169.5 114 75.4
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 5.5e-37 159.8 111 67.6
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 2.1e-33 147.9 124 58.9
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.8e-24 118.2 77 70.1
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 2.4e-24 117.9 97 66.0
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 7.7e-23 112.8 69 75.4
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.1e-21 109.0 64 79.7
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 1.1e-21 109.0 67 73.1
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.9e-21 108.2 65 84.6
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 9.4e-21 105.9 96 59.4
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.6e-20 105.1 65 81.5
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 3.6e-20 104.0 65 84.6
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.6e-20 103.6 65 80.0
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 1.8e-19 101.7 74 63.5
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 6.7e-19 99.8 184 39.1
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 9.7e-18 95.9 77 68.8
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 3.0e-11 74.3 46 67.4
RcHm_v2.0_Chr5g0019801 Rosa chinensis HOM05D003643 ORTHO05D005001 3.8e-06 57.4 48 72.9
Zm00001eb170120 Zea mays HOM05D000137 ORTHO05D014725 5.0e-06 57.0 45 60.0
Zm00001eb388940 Zea mays HOM05D004043 ORTHO05D002193 5.0e-06 57.0 45 60.0


User provided reference genes

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