Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 6.7e-165 583.9 297 100.0
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.4e-138 495.7 295 84.1
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.4e-138 495.7 295 84.1
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 2.5e-135 485.7 297 81.8
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 1.4e-133 479.9 297 81.1
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.3e-131 473.4 297 80.1
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 2.2e-131 472.6 297 80.1
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.9e-128 461.8 302 78.5
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.3e-127 458.4 298 77.9
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 7.3e-127 457.6 297 77.1
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 4.0e-125 451.8 297 75.8
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 2.0e-124 449.5 297 75.4
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 7.5e-124 447.6 294 76.5
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 2.2e-123 446.0 297 76.4
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 1.1e-122 443.7 297 72.7
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.4e-122 443.4 297 75.4
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 75.4
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 2.4e-122 442.6 297 76.8
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 3.2e-122 442.2 297 72.4
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 3.2e-122 442.2 294 75.9
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 4.1e-122 441.8 294 75.5
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 4.1e-122 441.8 294 75.5
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 73.7
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 75.1
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 9.2e-122 440.7 297 74.1
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.6e-121 439.9 298 74.2
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 4.6e-121 438.3 297 71.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 6.0e-121 438.0 297 74.7
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 6.0e-121 438.0 297 75.1
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 7.8e-121 437.6 297 73.7
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.0e-120 437.2 315 69.2
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.0e-120 437.2 297 74.4
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 1.3e-120 436.8 295 74.6
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.3e-120 436.8 294 74.5
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.3e-120 436.8 298 73.2
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.3e-120 436.8 298 73.2
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.7e-120 436.4 295 74.2
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 1.7e-120 436.4 297 73.7
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 2.3e-120 436.0 294 75.2
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.9e-120 435.3 297 72.7
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 5.1e-120 434.9 297 74.1
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 5.1e-120 434.9 297 73.7
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 8.6e-120 434.1 297 73.4
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 1.1e-119 433.7 297 72.4
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 5.6e-119 431.4 297 73.1
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 5.6e-119 431.4 315 68.6
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 7.3e-119 431.0 294 74.1
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 1.2e-118 430.3 297 72.7
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 1.2e-118 430.3 305 71.8
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 1.2e-118 430.3 305 71.8
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 72.4
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 72.1
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.6e-118 429.9 297 72.4
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.6e-118 428.7 297 73.4
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 8.1e-118 427.6 297 73.1
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 8.1e-118 427.6 298 72.5
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 2.3e-117 426.0 297 73.1
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 2.3e-117 426.0 297 72.7
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.1e-117 425.6 297 70.0
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.1e-117 425.6 315 67.9
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 8.9e-117 424.1 297 70.0
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.5e-116 423.3 282 73.8
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 1.5e-116 423.3 297 71.7
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 3.4e-116 422.2 295 71.5
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 3.4e-116 422.2 297 72.7
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 9.9e-116 420.6 295 71.2
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.3e-115 420.2 297 70.7
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 1.3e-115 420.2 299 72.6
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.7e-115 419.9 298 72.1
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 2.9e-115 419.1 297 69.4
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.9e-115 419.1 297 72.4
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 2.9e-115 419.1 296 70.9
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 6.4e-115 417.9 295 70.2
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 6.4e-115 417.9 284 73.9
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 6.4e-115 417.9 295 71.9
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 6.4e-115 417.9 341 64.8
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 8.3e-115 417.5 295 70.5
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.1e-114 417.2 295 70.2
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 5.4e-114 414.8 297 68.7
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 5.4e-114 414.8 297 69.7
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 5.4e-114 414.8 295 70.2
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 7.1e-114 414.5 295 70.5
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 7.1e-114 414.5 295 70.5
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.2e-113 413.7 297 71.0
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 1.2e-113 413.7 298 70.5
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.6e-113 413.3 299 69.9
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 3.5e-113 412.1 292 69.5
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 4.6e-113 411.8 296 68.9
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 4.6e-113 411.8 295 69.8
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 6.0e-113 411.4 295 69.8
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 7.8e-113 411.0 281 74.0
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 7.8e-113 411.0 274 76.6
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 1.3e-112 410.2 297 70.7
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.7e-112 409.8 293 71.0
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 5.1e-112 408.3 297 69.0
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.1e-111 407.1 294 68.0
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 5.6e-111 404.8 269 75.8
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 2.4e-109 399.4 282 70.9
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 2.4e-109 399.4 297 67.3
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 4.0e-109 398.7 295 68.5
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.4e-108 395.6 297 67.0
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 4.4e-108 395.2 298 66.4
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-107 393.7 297 67.0
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.3e-107 393.7 295 67.8
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.3e-107 393.7 298 65.8
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 6.4e-107 391.3 277 72.6
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 4.6e-105 385.2 297 67.0
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.4e-101 372.9 249 73.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.0e-96 355.9 226 78.3
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 9.6e-95 350.9 320 58.8
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 3.6e-94 349.0 297 63.0
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 2.4e-93 346.3 223 77.1
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.7e-89 332.8 291 55.3
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 2.7e-89 332.8 297 59.9
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.1e-85 320.9 215 72.1
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 2.4e-85 319.7 294 53.7
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 2.4e-85 319.7 262 56.9
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 2.0e-84 316.6 223 72.6
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 2.6e-84 316.2 295 55.9
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 7.6e-84 314.7 294 54.4
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.2e-83 313.2 294 55.1
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 9.3e-82 307.8 223 69.1
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.6e-81 307.0 290 54.1
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-78 297.4 272 57.7
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 5.3e-77 292.0 220 66.8
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.9e-74 283.5 272 57.0
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.6e-73 280.4 256 55.9
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 5.7e-63 245.4 252 54.0
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 5.7e-63 245.4 176 72.2
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 4.7e-57 225.7 176 63.6
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 2.6e-55 219.9 150 74.7
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 2.2e-54 216.9 162 64.2
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.7e-54 216.1 203 58.1
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 3.2e-50 203.0 143 66.4
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-48 197.6 149 63.8
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.5e-47 194.1 135 68.9
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 5.7e-47 192.2 182 58.8
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 3.6e-41 172.9 266 35.3
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.7e-35 154.1 307 34.2
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 2.2e-35 153.7 145 56.6
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 5.5e-34 149.1 106 72.6
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.8e-29 134.0 107 66.4
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 9.1e-29 131.7 99 62.6
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 3.6e-25 119.8 129 54.3
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 3.0e-24 116.7 128 56.2
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 6.8e-24 115.5 270 29.6
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 3.7e-22 109.8 65 83.1
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 9.5e-18 95.1 116 49.1
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.2e-17 94.7 81 56.8
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 6.4e-14 82.4 113 43.4
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 1.6e-12 77.8 113 41.6
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 6.0e-12 75.9 74 56.8
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 7.3e-10 68.9 39 79.5
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.6e-09 67.8 68 55.9
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.6e-07 60.5 51 62.7
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.9e-06 57.0 51 58.8
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.9e-06 57.0 51 58.8
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 6.4e-06 55.8 45 57.8


User provided reference genes

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