Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 5.7e-115 417.5 204 100.0
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 7.9e-24 114.8 104 60.6
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 9.1e-12 74.7 69 55.1
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 2.0e-11 73.6 68 55.9
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 5.9e-11 72.0 60 58.3
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 5.9e-11 72.0 60 58.3
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 7.7e-11 71.6 95 43.2
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 1.0e-10 71.2 60 60.0
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.3e-10 70.9 60 58.3
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 1.3e-10 70.9 60 58.3
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.3e-10 70.9 60 58.3
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 2.9e-10 69.7 59 61.0
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 2.9e-10 69.7 60 56.7
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 2.9e-10 69.7 60 56.7
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 3.8e-10 69.3 59 55.9
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 3.8e-10 69.3 60 56.7
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 3.8e-10 69.3 60 56.7
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 5.0e-10 68.9 71 47.9
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 5.0e-10 68.9 69 52.2
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 5.0e-10 68.9 69 52.2
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.5e-10 68.6 105 38.1
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.5e-10 68.6 59 57.6
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.5e-10 68.6 59 57.6
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 6.5e-10 68.6 60 58.3
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 8.5e-10 68.2 60 56.7
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 8.5e-10 68.2 60 55.0
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.1e-09 67.8 69 50.7
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 1.1e-09 67.8 60 53.3
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.5e-09 67.4 59 57.6
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 1.5e-09 67.4 60 53.3
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 1.9e-09 67.0 68 50.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.9e-09 67.0 71 46.5
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.9e-09 67.0 60 51.7
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 51.7
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 51.7
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 53.3
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 53.3
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 53.3
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 53.3
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.5e-09 66.6 59 55.9
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 2.5e-09 66.6 60 51.7
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 2.5e-09 66.6 66 51.5
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 3.2e-09 66.2 59 52.5
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 3.2e-09 66.2 60 55.0
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 3.2e-09 66.2 60 55.0
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 3.2e-09 66.2 59 54.2
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.2e-09 66.2 60 51.7
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 3.2e-09 66.2 60 55.0
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 3.2e-09 66.2 59 54.2
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 3.2e-09 66.2 71 47.9
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 4.2e-09 65.9 59 54.2
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 4.2e-09 65.9 59 54.2
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 4.2e-09 65.9 58 55.2
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 4.2e-09 65.9 59 52.5
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 4.2e-09 65.9 60 53.3
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 5.5e-09 65.5 60 55.0
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 5.5e-09 65.5 59 55.9
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 7.2e-09 65.1 76 44.7
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 7.2e-09 65.1 59 54.2
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 7.2e-09 65.1 60 53.3
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 7.2e-09 65.1 68 48.5
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 9.4e-09 64.7 60 53.3
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 9.4e-09 64.7 66 50.0
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 9.4e-09 64.7 60 51.7
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.2e-08 64.3 60 50.0
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 1.6e-08 63.9 66 48.5
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.6e-08 63.9 68 48.5
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.6e-08 63.9 59 55.9
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.6e-08 63.9 71 43.7
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.1e-08 63.5 60 51.7
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 2.1e-08 63.5 59 57.6
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 2.7e-08 63.2 59 54.2
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.7e-08 63.2 59 54.2
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 2.7e-08 63.2 68 50.0
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 2.7e-08 63.2 60 50.0
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 2.7e-08 63.2 59 52.5
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.7e-08 63.2 59 52.5
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.7e-08 63.2 60 53.3
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 2.7e-08 63.2 60 53.3
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 4.7e-08 62.4 59 50.8
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 4.7e-08 62.4 60 50.0
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 6.1e-08 62.0 60 50.0
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 6.1e-08 62.0 60 50.0
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 6.1e-08 62.0 60 50.0
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 6.1e-08 62.0 69 46.4
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 6.1e-08 62.0 60 50.0
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 1.0e-07 61.2 60 48.3
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.0e-07 61.2 60 50.0
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.0e-07 61.2 71 45.1
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 1.0e-07 61.2 60 48.3
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.0e-07 61.2 59 52.5
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 1.4e-07 60.8 60 48.3
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 1.8e-07 60.5 60 50.0
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.8e-07 60.5 59 50.8
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 1.8e-07 60.5 66 47.0
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 4.0e-07 59.3 59 50.8
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 4.0e-07 59.3 59 50.8
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 5.2e-07 58.9 60 48.3
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 5.2e-07 58.9 60 48.3
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 8.8e-07 58.2 59 49.2
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 8.8e-07 58.2 60 46.7
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 8.8e-07 58.2 60 45.0
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 1.2e-06 57.8 65 47.7
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.5e-06 57.4 59 49.2
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 2.0e-06 57.0 60 46.7
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 2.0e-06 57.0 60 46.7
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-06 56.6 99 39.4
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-06 56.6 52 53.8
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 4.4e-06 55.8 59 47.5
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 7.5e-06 55.1 79 39.2
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 9.8e-06 54.7 61 44.3


User provided reference genes

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