Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 4.2e-62 241.1 117 100.0
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 3.7e-26 121.7 128 56.2
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 9.2e-25 117.1 126 53.2
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.0e-24 115.9 128 51.6
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 2.0e-24 115.9 128 51.6
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 2.7e-24 115.5 126 53.2
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 2.7e-24 115.5 128 51.6
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 3.5e-24 115.2 128 50.8
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.5e-24 115.2 128 50.8
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 3.5e-24 115.2 128 51.6
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 4.6e-24 114.8 126 51.6
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 6.0e-24 114.4 128 50.0
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 7.8e-24 114.0 128 50.8
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.0e-23 113.6 128 50.0
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 1.7e-23 112.8 104 60.6
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 2.3e-23 112.5 128 50.8
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 3.0e-23 112.1 126 50.8
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 3.0e-23 112.1 126 50.0
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.9e-23 111.7 128 51.6
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.9e-23 111.7 128 51.6
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.9e-23 111.7 126 51.6
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 5.0e-23 111.3 128 48.4
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 5.0e-23 111.3 128 49.2
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 5.0e-23 111.3 126 49.2
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 6.6e-23 110.9 126 49.2
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 6.6e-23 110.9 128 48.4
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 6.6e-23 110.9 135 48.9
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 8.6e-23 110.5 128 48.4
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 8.6e-23 110.5 128 49.2
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-22 110.2 128 50.0
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-22 110.2 128 50.0
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.1e-22 110.2 126 49.2
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.5e-22 109.8 128 51.6
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.5e-22 109.8 128 49.2
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 1.9e-22 109.4 128 48.4
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.5e-22 109.0 126 50.8
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 2.5e-22 109.0 135 48.1
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.3e-22 108.6 128 50.0
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 4.3e-22 108.2 126 49.2
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 5.6e-22 107.8 128 49.2
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 5.6e-22 107.8 128 50.0
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 5.6e-22 107.8 128 50.0
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 49.2
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 49.2
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 49.2
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 48.4
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 48.4
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 50.0
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 50.0
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 9.5e-22 107.1 128 48.4
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 9.5e-22 107.1 126 50.0
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.2e-21 106.7 128 47.7
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.2e-21 106.7 128 49.2
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.2e-21 106.7 128 49.2
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.2e-21 106.7 128 49.2
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.2e-21 106.7 128 49.2
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 1.2e-21 106.7 126 50.0
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.6e-21 106.3 128 48.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.6e-21 106.3 128 49.2
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 2.1e-21 105.9 128 47.7
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.8e-21 105.5 128 48.4
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.8e-21 105.5 128 47.7
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.8e-21 105.5 126 50.0
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 3.6e-21 105.1 128 49.2
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 3.6e-21 105.1 126 49.2
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 3.6e-21 105.1 126 46.8
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 4.7e-21 104.8 127 48.8
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 4.7e-21 104.8 128 47.7
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 4.7e-21 104.8 128 47.7
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 6.2e-21 104.4 126 46.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 6.2e-21 104.4 126 46.8
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 6.2e-21 104.4 126 48.4
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 8.0e-21 104.0 128 50.0
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.1e-20 103.6 126 48.4
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.1e-20 103.6 126 48.4
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 1.4e-20 103.2 126 46.0
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.4e-20 103.2 128 46.1
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 1.8e-20 102.8 126 47.6
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 2.3e-20 102.4 128 46.9
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 4.0e-20 101.7 128 45.3
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 5.2e-20 101.3 128 45.3
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 6.8e-20 100.9 128 46.1
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 6.8e-20 100.9 128 46.1
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.8e-20 100.9 128 44.5
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 8.9e-20 100.5 128 45.3
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 8.9e-20 100.5 128 45.3
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 1.2e-19 100.1 128 45.3
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.2e-19 100.1 128 46.1
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 1.5e-19 99.8 128 45.3
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 2.0e-19 99.4 126 46.0
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 3.4e-19 98.6 128 45.3
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 5.8e-19 97.8 128 44.5
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 5.8e-19 97.8 128 45.3
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 5.8e-19 97.8 127 47.2
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 9.8e-19 97.1 126 43.7
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 1.3e-18 96.7 128 47.7
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 2.2e-18 95.9 128 44.5
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 2.2e-18 95.9 128 44.5
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 2.2e-18 95.9 128 46.1
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 2.9e-18 95.5 128 45.3
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 2.9e-18 95.5 128 45.3
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 4.9e-18 94.7 126 45.2
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 6.4e-18 94.4 146 39.7
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 8.3e-18 94.0 146 39.7
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 1.1e-17 93.6 128 43.8
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.9e-17 92.8 128 44.5
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 2.4e-17 92.4 124 45.2
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 4.1e-17 91.7 128 43.8
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 4.1e-17 91.7 126 44.4
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 5.4e-17 91.3 128 44.5
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 2.7e-16 89.0 146 37.7
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.0e-15 87.0 128 39.8
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 2.3e-15 85.9 82 57.3
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 3.0e-15 85.5 106 47.2
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.0e-15 85.5 106 47.2
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 5.1e-15 84.7 126 41.3
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 5.1e-15 84.7 128 35.9
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 3.3e-14 82.0 126 38.1
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 7.3e-14 80.9 128 38.3
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 8.1e-13 77.4 126 35.7
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 1.1e-12 77.0 124 38.7
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-12 75.1 105 44.8
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-12 75.1 105 44.8
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 5.2e-12 74.7 126 33.3
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.2e-11 73.6 126 37.3
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.6e-11 72.4 120 40.0
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 7.5e-11 70.9 127 33.9
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 8.3e-10 67.4 92 45.7
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 3.2e-09 65.5 128 36.7
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 7.1e-09 64.3 128 35.9
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 3.5e-08 62.0 92 43.5
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.9e-07 58.5 69 44.9
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 4.3e-06 55.1 113 35.4


User provided reference genes

Program Settings