Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold296G47573 Striga asiatica HOM05D000030 ORTHO05D000009 2.5e-113 412.1 215 100.0
SGA_v2.0_scaffold2G01199 Striga asiatica HOM05D000030 ORTHO05D000009 1.1e-55 220.7 232 59.5
RcHm_v2.0_Chr5g0038441 Rosa chinensis HOM05D000030 ORTHO05D000009 2.6e-17 93.2 312 28.8
RcHm_v2.0_Chr5g0007101 Rosa chinensis HOM05D000030 ORTHO05D000031 2.1e-14 83.6 276 29.3
RcHm_v2.0_Chr6g0283851 Rosa chinensis HOM05D000030 ORTHO05D000031 2.3e-13 80.1 225 32.0
FvH4_2g18091 Fragaria vesca HOM05D000030 ORTHO05D000009 6.7e-13 78.6 321 27.1
RcHm_v2.0_Chr5g0035131 Rosa chinensis HOM05D000030 ORTHO05D000009 8.1e-11 71.6 89 43.8
RcHm_v2.0_Chr6g0251881 Rosa chinensis HOM05D000030 ORTHO05D000009 9.0e-10 68.2 299 25.4
RcHm_v2.0_Chr7g0235371 Rosa chinensis HOM05D000030 ORTHO05D000009 5.8e-09 65.5 86 41.9
RcHm_v2.0_Chr2g0142391 Rosa chinensis HOM05D000030 ORTHO05D000031 1.3e-08 64.3 112 42.0
FvH4_4g06882 Fragaria vesca HOM05D000030 ORTHO05D000031 6.4e-08 62.0 325 24.3
Lj2C73T8 Lonicera japonica HOM05D011311 ORTHO05D000009 3.2e-07 59.7 52 55.8
RcHm_v2.0_Chr6g0289081 Rosa chinensis HOM05D000030 ORTHO05D000031 3.2e-07 59.7 83 34.9
FvH4_2g26902 Fragaria vesca HOM05D000030 ORTHO05D000009 4.2e-07 59.3 90 41.1
RcHm_v2.0_Chr3g0467291 Rosa chinensis HOM05D000030 ORTHO05D000009 4.2e-07 59.3 86 38.4
RcHm_v2.0_Chr7g0242101 Rosa chinensis HOM05D000030 ORTHO05D000031 3.5e-06 56.2 255 22.4
Atru.chr13.1603 Acer truncatum HOM05D000030 ORTHO05D000009 4.6e-06 55.8 79 43.0
Atru.chr6.1301 Acer truncatum HOM05D000030 ORTHO05D000009 4.6e-06 55.8 79 43.0
Atru.chr12.2535 Acer truncatum HOM05D000030 ORTHO05D000009 7.9e-06 55.1 76 42.1


User provided reference genes

Program Settings