Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold295G47513 Striga asiatica HOM05D003895 ORTHO05D004723 0.0e+00 1821.2 887 100.0
Migut.E00651 Erythranthe guttata HOM05D003895 ORTHO05D004723 0.0e+00 1263.8 731 83.4
MSTRG.13762 Avicennia marina HOM05D003895 ORTHO05D004723 0.0e+00 1256.5 733 84.2
Oeu009988.1 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1248.8 729 83.3
SalBow2G2362 Salvia bowleyana HOM05D003895 ORTHO05D004723 0.0e+00 1241.9 728 83.7
Cc05_g02370 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1231.5 732 81.8
Cc08_g16460 Coffea canephora HOM05D003895 ORTHO05D004723 0.0e+00 1229.5 727 81.6
Solyc08g082830.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 0.0e+00 1228.4 732 81.4
Nitab4.5_0002439g0120 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1227.6 732 81.4
CSS0003453 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1221.8 732 81.7
PGSC0003DMG400012128 Solanum tuberosum HOM05D003895 ORTHO05D004723 0.0e+00 1221.1 732 80.7
Nitab4.5_0002367g0210 Nicotiana tabacum HOM05D003895 ORTHO05D004723 0.0e+00 1216.4 724 81.6
CSS0024936 Camellia sinensis var. sinensis HOM05D003895 ORTHO05D004723 0.0e+00 1213.4 732 81.4
CAN.G567.61 Capsicum annuum HOM05D003895 ORTHO05D004723 0.0e+00 1212.2 732 80.1
Thecc.03G303200 Theobroma cacao HOM05D003895 ORTHO05D004723 0.0e+00 1206.0 733 79.7
Cfa011961 Carpinus fangiana HOM05D003895 ORTHO05D004723 0.0e+00 1205.7 734 80.1
PGR042G2513 Punica granatum HOM05D003895 ORTHO05D004723 0.0e+00 1205.7 734 79.7
Rhsim07G0079800 Rhododendron simsii HOM05D003895 ORTHO05D004723 0.0e+00 1204.9 732 80.5
PSO017G1958 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1204.5 692 82.2
TWI60G1173 Tripterygium wilfordii HOM05D003895 ORTHO05D004723 0.0e+00 1204.1 731 80.2
Cpa.g.sc15.11 Carica papaya HOM05D003895 ORTHO05D004723 0.0e+00 1203.3 739 79.7
HanXRQChr06g0166321 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1203.3 727 80.7
Actinidia04389 Actinidia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1202.6 728 80.8
Ciclev10019024m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1202.2 732 79.4
Manes.02G005900 Manihot esculenta HOM05D003895 ORTHO05D004723 0.0e+00 1202.2 731 80.0
Potri.001G087400 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1201.8 731 79.5
CANSAT54G0301 Cannabis sativa HOM05D003895 ORTHO05D004723 0.0e+00 1201.4 733 78.6
Ciclev10024991m.g Citrus clementina HOM05D003895 ORTHO05D004723 0.0e+00 1200.7 732 79.8
DCAR_006502 Daucus carota HOM05D003895 ORTHO05D004723 0.0e+00 1200.7 730 79.6
Prupe.5G126000 Prunus persica HOM05D003895 ORTHO05D004723 0.0e+00 1199.5 734 78.6
ECA240G1010 Erigeron canadensis HOM05D003895 ORTHO05D004723 0.0e+00 1198.7 728 79.7
FAN18G2619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1198.7 732 78.1
Potri.003G143700 Populus trichocarpa HOM05D003895 ORTHO05D004723 0.0e+00 1198.7 731 79.3
Gorai.004G131300 Gossypium raimondii HOM05D003895 ORTHO05D004723 0.0e+00 1198.3 731 79.2
RcHm_v2.0_Chr7g0186311 Rosa chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1198.0 730 78.6
Aqoxy2G01051 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 0.0e+00 1197.6 733 79.1
Oeu059576.4 Olea europaea HOM05D003895 ORTHO05D004723 0.0e+00 1197.2 782 76.2
FAN18G3428 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1196.4 728 78.4
HanXRQChr03g0083671 Helianthus annuus HOM05D003895 ORTHO05D004723 0.0e+00 1196.4 728 79.9
MD14G1134200 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1196.4 734 78.5
CiPaw.11G115900 Carya illinoinensis HOM05D003895 ORTHO05D004723 0.0e+00 1196.0 733 79.5
FvH4_5g11490 Fragaria vesca HOM05D003895 ORTHO05D004723 0.0e+00 1195.3 728 78.3
FAN08G0955 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1194.5 730 78.2
QL02p029300 Quercus lobata HOM05D003895 ORTHO05D004723 0.0e+00 1194.5 730 79.9
Sopen08g031060 Solanum pennellii HOM05D003895 ORTHO05D004723 0.0e+00 1194.1 696 82.6
Eucgr.E01025 Eucalyptus grandis HOM05D003895 ORTHO05D004723 0.0e+00 1192.6 726 78.8
FAN04G2440 Fragaria x ananassa HOM05D003895 ORTHO05D004723 0.0e+00 1192.2 730 78.1
Gohir.D08G124600 Gossypium hirsutum HOM05D003895 ORTHO05D004723 0.0e+00 1191.4 731 78.9
MD06G1113100 Malus domestica HOM05D003895 ORTHO05D004723 0.0e+00 1190.6 734 78.3
MELO3C005756.2 Cucumis melo HOM05D003895 ORTHO05D004723 0.0e+00 1190.3 727 79.8
COL.COLO4_10753 Corchorus olitorius HOM05D003895 ORTHO05D004723 0.0e+00 1187.9 727 79.4
Sabra01G0063700 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1185.6 728 78.8
Duzib068G0704 Durio zibethinus HOM05D003895 ORTHO05D004723 0.0e+00 1185.2 733 78.6
vmacro13870 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1185.2 774 75.6
PSO170G0459 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1183.7 735 77.6
Aa31LG2G1550 Aethionema arabicum HOM05D003895 ORTHO05D004723 0.0e+00 1182.2 727 79.0
TAR629G1064 Trochodendron aralioides HOM05D003895 ORTHO05D004723 0.0e+00 1182.2 734 79.0
Haze_09120 Corylus avellana HOM05D003895 ORTHO05D004723 0.0e+00 1179.9 749 77.8
THA.LOC104823616 Tarenaya hassleriana HOM05D003895 ORTHO05D004723 0.0e+00 1176.8 727 79.0
Sabra03G0104100 Salix brachista HOM05D003895 ORTHO05D004723 0.0e+00 1174.8 774 75.1
Lalb_Chr16g0390761 Lupinus albus HOM05D003895 ORTHO05D004723 0.0e+00 1173.7 735 77.7
vmacro10679 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1171.8 779 74.6
vmacro22441 Vaccinium macrocarpon HOM05D003895 ORTHO05D004723 0.0e+00 1171.8 779 74.6
Glyma.05G219500 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1171.4 734 77.7
Ca_17453_v3 Cicer arietinum L. HOM05D003895 ORTHO05D004723 0.0e+00 1171.0 732 77.6
GSVIVG01019608001 Vitis vinifera HOM05D003895 ORTHO05D004723 0.0e+00 1169.8 728 79.0
Lj4g0018300 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1169.5 736 77.0
Nn3g20296 Nelumbo nucifera HOM05D003895 ORTHO05D004723 0.0e+00 1169.1 727 78.1
Sp1g40750 Schrenkiella parvula HOM05D003895 ORTHO05D004723 0.0e+00 1167.1 727 77.6
Medtr8g099885 Medicago truncatula HOM05D003895 ORTHO05D004723 0.0e+00 1166.8 734 76.8
Hund14202 Selenicereus undatus HOM05D003895 ORTHO05D004723 0.0e+00 1166.8 733 77.2
BcaB07g33238 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1165.6 727 77.3
Phvul.002G328900 Phaseolus vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1164.1 734 77.1
Thhalv10011266m.g Eutrema salsugineum HOM05D003895 ORTHO05D004723 0.0e+00 1162.5 727 76.9
CARHR044680 Cardamine hirsuta HOM05D003895 ORTHO05D004723 0.0e+00 1161.0 727 76.8
BcaB04g17002 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1160.6 727 77.3
Carub.0001s4358 Capsella rubella HOM05D003895 ORTHO05D004723 0.0e+00 1160.6 727 76.9
TPR.G18245 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1160.6 734 77.0
TPR.G3395 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1160.2 734 76.4
Lj4g0016220 Lotus japonicus HOM05D003895 ORTHO05D004723 0.0e+00 1159.4 733 76.4
arahy.Tifrunner.gnm1.ann1.68E5M7 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1159.1 732 76.8
BolC6t36080H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1157.5 728 76.8
Lj2C160T5 Lonicera japonica HOM05D003895 ORTHO05D004723 0.0e+00 1156.0 730 78.6
BraA06t23255Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1155.6 729 76.7
BcaC01g01456 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1154.8 727 77.0
Psat7g023560 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1154.8 734 75.9
A06p00400 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1154.0 729 76.5
A08p01020 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1152.9 727 76.6
C06p10070 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1152.9 728 76.6
BcaC08g43605 Brassica carinata HOM05D003895 ORTHO05D004723 0.0e+00 1152.1 728 76.8
AT1G55090 Arabidopsis thaliana HOM05D003895 ORTHO05D004723 0.0e+00 1149.8 727 76.5
AL1G63080 Arabidopsis lyrata HOM05D003895 ORTHO05D004723 0.0e+00 1148.3 727 76.2
Peaxi162Scf00074g00431 Petunia axillaris HOM05D003895 ORTHO05D004723 0.0e+00 1145.2 732 77.3
arahy.Tifrunner.gnm1.ann1.M62N24 Arachis hypogaea HOM05D003895 ORTHO05D004723 0.0e+00 1143.3 723 76.6
ClCG01G001820 Citrullus lanatus HOM05D003895 ORTHO05D004723 0.0e+00 1141.7 825 70.3
VMungo0251G3777 Vigna mungo HOM05D003895 ORTHO05D004723 0.0e+00 1137.9 729 76.5
Lsat_1_v5_gn_6_83601 Lactuca sativa HOM05D003895 ORTHO05D004723 0.0e+00 1128.2 727 77.2
Sc01g0010470 Simmondsia chinensis HOM05D003895 ORTHO05D004723 0.0e+00 1127.5 617 86.7
Sed0021355 Sechium edule HOM05D003895 ORTHO05D004723 0.0e+00 1123.2 630 85.4
EL10Ac5g12963 Beta vulgaris HOM05D003895 ORTHO05D004723 0.0e+00 1122.1 705 76.5
Hma1.2p1_1835F.1_g304665 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 0.0e+00 1119.8 616 86.7
AUR62029097 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1118.6 736 74.5
BraA08t32154Z Brassica rapa HOM05D003895 ORTHO05D004723 0.0e+00 1117.1 738 74.3
C03p92220 Brassica napus HOM05D003895 ORTHO05D004723 0.0e+00 1115.1 739 74.4
AUR62015016 Chenopodium quinoa HOM05D003895 ORTHO05D004723 0.0e+00 1114.4 750 72.9
Psat7g023520 Pisum sativum HOM05D003895 ORTHO05D004723 0.0e+00 1114.0 723 73.7
BolC3t21537H Brassica oleracea HOM05D003895 ORTHO05D004723 0.0e+00 1112.4 739 74.2
unitig_21.g20891 Utricularia gibba HOM05D003895 ORTHO05D004723 0.0e+00 1108.6 735 74.7
PSO339G2482 Papaver somniferum HOM05D003895 ORTHO05D004723 0.0e+00 1107.0 733 73.1
Glyma.08G025800 Glycine max HOM05D003895 ORTHO05D004723 0.0e+00 1089.3 617 84.0
TPR.G3413 Trifolium pratense HOM05D003895 ORTHO05D004723 0.0e+00 1085.9 722 72.0
Dinv34692 Davidia involucrata HOM05D003895 ORTHO05D004723 0.0e+00 1080.9 585 87.7
CsaV3_5G001970 Cucumis sativus L. HOM05D003895 ORTHO05D004723 8.7e-309 1063.5 662 77.9
EL10Ac5g12472 Beta vulgaris HOM05D003895 ORTHO05D004723 2.5e-308 1062.0 687 74.5
MBI02_g10555_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.6e-307 1059.3 740 69.7
HPP92_025338 Vanilla planifolia HOM05D003895 ORTHO05D004723 9.0e-306 1053.5 706 71.4
Zm00001eb094700 Zea mays HOM05D003895 ORTHO05D004723 8.4e-304 1047.0 733 69.4
ATR1098G082 Amborella trichopoda HOM05D003895 ORTHO05D004723 3.6e-299 1031.6 734 68.9
SEGI_31460 Sequoiadendron giganteum HOM05D003895 ORTHO05D004723 1.9e-284 982.6 736 66.2
Manes.02G005800 Manihot esculenta HOM05D003895 ORTHO05D004723 9.3e-279 963.8 706 67.8
Ah.12g052950 Amaranthus hybridus HOM05D003895 ORTHO05D004723 1.3e-277 959.9 752 66.6
FAN13G0619 Fragaria x ananassa HOM05D003895 ORTHO05D004723 6.7e-277 957.6 730 65.6
AUR62019884 Chenopodium quinoa HOM05D003895 ORTHO05D004723 5.5e-263 911.4 669 68.2
Mapoly0035s0052 Marchantia polymorpha HOM05D003895 ORTHO05D004723 5.9e-257 891.3 736 61.1
CBR_g19728 Chara braunii HOM05D003895 ORTHO05D004723 2.2e-256 889.4 713 61.4
SMO174G0028 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 2.1e-254 882.9 732 60.2
Migut.E01630 Erythranthe guttata HOM05D003895 ORTHO05D004723 3.6e-238 828.9 502 79.7
MCO17G006 Micromonas commoda HOM05D003895 ORTHO05D004723 6.1e-238 828.2 690 58.7
AagrBONN_evm.TU.Sc2ySwM_228.4970 Anthoceros agrestis HOM05D003895 ORTHO05D004723 2.1e-230 803.1 655 60.9
SMO358G0326 Selaginella moellendorffii HOM05D003895 ORTHO05D004723 4.0e-229 798.9 697 56.5
Os07g0167100 Oryza sativa ssp. japonica HOM05D003895 ORTHO05D004723 1.3e-227 793.9 567 70.0
Pp3c17_21910 Physcomitrium patens HOM05D003895 ORTHO05D004723 1.5e-223 780.4 672 58.9
Gohir.A08G111660 Gossypium hirsutum HOM05D003895 ORTHO05D004723 5.6e-223 778.5 505 76.6
PRCOL_00000896 Prasinoderma coloniale HOM05D003895 ORTHO05D004723 1.5e-212 743.8 702 53.4
Hma1.2p1_0077F.1_g039630 Hydrangea macrophylla HOM05D003895 ORTHO05D004723 2.0e-212 743.4 417 84.2
Cre10.g435250 Chlamydomonas reinhardtii HOM05D003895 ORTHO05D004723 1.5e-207 727.2 783 50.1
Cfa024512 Carpinus fangiana HOM05D003895 ORTHO05D004723 1.3e-184 651.0 705 50.1
MBI02_g43672_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 3.3e-183 646.4 422 73.0
PSO210G1536 Papaver somniferum HOM05D003895 ORTHO05D004723 2.8e-158 563.5 365 72.6
Aqoxy456s001 Aquilegia oxysepala HOM05D003895 ORTHO05D004723 1.1e-151 541.6 300 87.3
ECA246G1101 Erigeron canadensis HOM05D003895 ORTHO05D004723 2.3e-144 517.3 311 81.7
Haze_09105 Corylus avellana HOM05D003895 ORTHO05D004723 1.0e-136 491.9 349 73.1
MBI05_g40947_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 2.8e-118 430.6 356 62.1
AUR62007020 Chenopodium quinoa HOM05D003895 ORTHO05D004723 3.7e-118 430.3 319 68.7
SalBow2G1745 Salvia bowleyana HOM05D003895 ORTHO05D004723 4.4e-111 406.8 314 65.9
MBI15_g06349_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 1.4e-109 401.7 330 62.1
Gohir.A08G111640 Gossypium hirsutum HOM05D003895 ORTHO05D004723 6.6e-91 339.7 183 82.5
MBI05_g43497_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 6.6e-91 339.7 285 60.7
MBI05_g40946_MAGBIO Magnolia biondii HOM05D003895 ORTHO05D004723 8.6e-91 339.3 219 72.6
SalBow2G0791 Salvia bowleyana HOM05D003895 ORTHO05D004723 4.0e-72 277.3 168 75.6
arahy.Tifrunner.gnm1.ann1.RT27P1 Arachis hypogaea HOM05D003895 ORTHO05D004723 3.0e-67 261.2 341 46.6
Psat7g023400 Pisum sativum HOM05D003895 ORTHO05D004723 1.4e-56 225.7 397 40.3
BcaB04g17001 Brassica carinata HOM05D003895 ORTHO05D004723 6.5e-54 216.9 159 69.8
BcaB04g16999 Brassica carinata HOM05D003895 ORTHO05D004723 1.2e-47 196.1 190 56.8
BcaB04g17000 Brassica carinata HOM05D003895 ORTHO05D004723 2.9e-46 191.4 216 51.4
AagrBONN_evm.TU.Sc2ySwM_228.4951 Anthoceros agrestis HOM05D003895 ORTHO05D004723 7.9e-44 183.3 219 42.9
SalBow2G2695 Salvia bowleyana HOM05D003895 ORTHO05D004723 1.3e-43 182.6 216 47.7
BcaB05g22068 Brassica carinata HOM05D003895 ORTHO05D004723 1.1e-42 179.5 101 76.2
BcaB01g00975 Brassica carinata HOM05D003895 ORTHO05D004723 2.2e-41 175.3 101 76.2
BcaB01g02352 Brassica carinata HOM05D003895 ORTHO05D004723 5.9e-31 140.6 80 76.2
Nitab4.5_0000974g0050 Nicotiana tabacum HOM05D003895 ORTHO05D285369 1.8e-24 119.0 126 52.4
DCAR_006503 Daucus carota HOM05D001368 ORTHO05D003846 5.9e-23 114.0 200 40.5
MBI15_g06350_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 1.0e-22 113.2 63 74.6
CARHR106400 Cardamine hirsuta HOM05D003895 ORTHO05D004723 1.7e-22 112.5 139 43.2
CARHR260480 Cardamine hirsuta HOM05D003895 ORTHO05D004723 2.2e-22 112.1 139 43.2
Lj4g0022111 Lotus japonicus HOM05D019175 ORTHO05D018974 2.5e-21 108.6 60 85.0
Nitab4.5_0001308g0060 Nicotiana tabacum HOM05D003895 ORTHO05D282403 8.0e-20 103.6 111 52.3
CAN.G628.62 Capsicum annuum HOM05D003895 ORTHO05D004723 8.8e-19 100.1 110 52.7
BcaC01g01459 Brassica carinata HOM05D003895 ORTHO05D004723 3.8e-14 84.7 69 59.4
Sopen06g027550 Solanum pennellii HOM05D003895 ORTHO05D004723 3.8e-14 84.7 157 38.9
BcaC01g01463 Brassica carinata HOM05D003895 ORTHO05D004723 1.5e-13 82.8 68 58.8
Solyc06g071240.3 Solanum lycopersicum HOM05D003895 ORTHO05D004723 8.0e-12 77.0 67 59.7
BcaB04g16998 Brassica carinata HOM05D003895 ORTHO05D004723 1.8e-11 75.9 44 70.5
Nitab4.5_0004376g0060 Nicotiana tabacum HOM05D003895 ORTHO05D286866 3.0e-11 75.1 49 77.6
BcaC01g01457 Brassica carinata HOM05D003895 ORTHO05D004723 5.7e-10 70.9 58 56.9
Glyma.17G110701 Glycine max HOM05D003895 ORTHO05D004723 7.0e-08 63.9 34 88.2
Atru.chr9.1960 Acer truncatum HOM05D003895 ORTHO05D004723 9.1e-08 63.5 45 66.7
PGSC0003DMG400033059 Solanum tuberosum HOM05D003895 ORTHO05D004723 2.0e-07 62.4 40 67.5
Nitab4.5_0000050g0220 Nicotiana tabacum HOM05D003895 ORTHO05D285100 2.7e-07 62.0 43 79.1


User provided reference genes

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