Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 9.0e-122 440.3 222 100.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 2.2e-75 286.2 195 75.4
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 2.5e-71 272.7 197 74.6
SGA_v2.0_scaffold35G14135 Striga asiatica HOM05D003057 ORTHO05D012636 1.3e-59 233.8 196 65.3
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 1.2e-57 227.3 156 76.3
SGA_v2.0_scaffold57G20118 Striga asiatica HOM05D003057 ORTHO05D012636 7.7e-57 224.6 182 65.9
SGA_v2.0_scaffold306G48017 Striga asiatica HOM05D003057 ORTHO05D012636 6.8e-53 211.5 161 68.9
SGA_v2.0_scaffold165G38202 Striga asiatica HOM05D003057 ORTHO05D012636 2.0e-52 209.9 159 71.7
SGA_v2.0_scaffold21G09540 Striga asiatica HOM05D003057 ORTHO05D012636 4.4e-52 208.8 149 73.8
SGA_v2.0_scaffold1179G53858 Striga asiatica HOM05D003057 ORTHO05D012636 3.3e-47 192.6 140 72.1
SGA_v2.0_scaffold26G11423 Striga asiatica HOM05D003057 ORTHO05D012636 4.7e-46 188.7 134 76.9
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 6.8e-45 184.9 193 56.5
SGA_v2.0_scaffold17G08167 Striga asiatica HOM05D003057 ORTHO05D012636 2.7e-41 172.9 111 82.0
SGA_v2.0_scaffold10G05245 Striga asiatica HOM05D003057 ORTHO05D012636 6.2e-38 161.8 131 67.9
SGA_v2.0_scaffold165G38204 Striga asiatica HOM05D003057 ORTHO05D012636 4.6e-33 145.6 112 69.6
SGA_v2.0_scaffold17G08076 Striga asiatica HOM05D003057 ORTHO05D012636 2.3e-32 143.3 112 68.8
SGA_v2.0_scaffold77G25207 Striga asiatica HOM05D000001 ORTHO05D000003 1.2e-30 137.5 113 67.3
SGA_v2.0_scaffold10G05322 Striga asiatica HOM05D003057 ORTHO05D012636 4.9e-27 125.6 127 59.1
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 6.9e-13 78.6 78 50.0
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 9.0e-13 78.2 99 43.4
Sp3g10110 Schrenkiella parvula HOM05D036201 ORTHO05D012636 3.8e-11 72.8 85 45.9
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 2.4e-10 70.1 225 32.4
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 1.2e-09 67.8 81 46.9
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 1.2e-09 67.8 81 46.9
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 1.2e-09 67.8 81 46.9
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.8e-08 63.9 79 41.8
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 2.3e-08 63.5 70 50.0
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 5.1e-08 62.4 124 35.5
SGA_v2.0_scaffold10G05324 Striga asiatica HOM05D003057 ORTHO05D012636 8.7e-08 61.6 39 74.4
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.9e-07 60.5 88 36.4
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.6e-07 58.9 86 37.2
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 5.6e-07 58.9 83 42.2
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.6e-07 58.9 82 42.7
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.6e-07 58.9 82 42.7
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.4e-07 58.5 82 42.7
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.6e-07 58.2 101 34.7
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-06 57.0 92 35.9
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-06 56.6 81 39.5
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 4.8e-06 55.8 83 42.2
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 4.8e-06 55.8 76 47.4


User provided reference genes

Program Settings