Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 1.4e-171 606.3 326 100.0
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 6.1e-119 431.4 343 63.0
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 6.3e-116 421.4 347 60.8
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 5.0e-113 411.8 349 58.2
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 1.9e-112 409.8 357 57.4
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 1.2e-111 407.1 357 56.6
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 2.8e-111 406.0 343 58.9
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 4.7e-111 405.2 348 57.2
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 4.7e-111 405.2 349 56.7
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 5.2e-110 401.7 343 58.3
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 1.2e-109 400.6 348 56.9
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 2.0e-109 399.8 343 57.7
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 2.6e-109 399.4 351 57.5
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 2.6e-109 399.4 343 57.7
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 9.8e-109 397.5 346 56.6
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 4.9e-108 395.2 350 65.1
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 6.4e-108 394.8 348 57.5
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 8.3e-108 394.4 346 55.2
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 1.4e-107 393.7 344 56.4
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 3.2e-107 392.5 348 54.9
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 4.1e-107 392.1 349 60.5
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 4.1e-107 392.1 344 56.4
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 7.0e-107 391.3 350 56.3
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 9.2e-107 391.0 342 55.6
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 9.2e-107 391.0 343 56.3
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.2e-106 390.6 344 55.5
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 1.2e-106 390.6 400 50.5
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 1.6e-106 390.2 346 55.5
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 2.0e-106 389.8 344 55.5
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 7.8e-106 387.9 341 56.6
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 1.7e-105 386.7 348 63.2
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 3.0e-105 386.0 341 57.8
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 3.9e-105 385.6 345 60.6
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.3e-104 382.5 346 55.2
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 3.3e-104 382.5 350 57.7
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 4.3e-104 382.1 346 55.5
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 4.3e-104 382.1 346 55.5
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 7.3e-104 381.3 338 61.5
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 7.3e-104 381.3 349 53.3
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 9.5e-104 380.9 339 57.2
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 9.5e-104 380.9 341 54.8
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 9.5e-104 380.9 346 59.5
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 1.2e-103 380.6 346 54.0
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 2.1e-103 379.8 339 58.1
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 4.7e-103 378.6 344 53.5
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 4.7e-103 378.6 351 57.0
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 4.7e-103 378.6 346 55.2
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 8.0e-103 377.9 343 56.3
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 1.8e-102 376.7 345 54.5
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 1.8e-102 376.7 347 53.6
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 2.3e-102 376.3 346 64.2
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 4.0e-102 375.6 346 52.9
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 8.9e-102 374.4 346 59.2
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 3.4e-101 372.5 347 59.9
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 5.8e-101 371.7 340 65.0
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 5.8e-101 371.7 346 53.8
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 5.8e-101 371.7 339 54.6
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 5.8e-101 371.7 342 57.0
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 7.5e-101 371.3 346 58.4
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 1.7e-100 370.2 348 58.0
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 2.9e-100 369.4 351 61.3
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 2.9e-100 369.4 338 55.0
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 3.7e-100 369.0 338 54.4
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 8.3e-100 367.9 341 60.1
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.9e-99 366.7 351 58.4
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 2.4e-99 366.3 341 60.7
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 3.2e-99 365.9 351 58.1
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 3.2e-99 365.9 345 54.5
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 4.1e-99 365.5 337 61.4
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 5.4e-99 365.2 337 63.5
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 7.0e-99 364.8 337 62.3
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 7.0e-99 364.8 337 62.3
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 7.0e-99 364.8 337 62.3
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 7.0e-99 364.8 346 63.3
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 7.0e-99 364.8 346 57.5
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 1.2e-98 364.0 344 63.1
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 1.2e-98 364.0 346 57.8
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.6e-98 363.6 325 61.2
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.7e-98 362.8 331 55.9
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 7.8e-98 361.3 351 53.6
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 7.8e-98 361.3 346 57.2
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 2.3e-97 359.8 346 58.1
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 3.9e-97 359.0 323 55.7
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 5.0e-97 358.6 352 58.0
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 5.0e-97 358.6 345 58.3
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 1.5e-96 357.1 346 63.0
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 2.5e-96 356.3 349 58.2
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 1.8e-94 350.1 320 60.9
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 1.2e-93 347.4 343 61.2
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 8.3e-92 341.3 346 51.2
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 4.6e-90 335.5 347 54.8
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.2e-87 327.4 348 49.4
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 1.1e-86 324.3 348 48.6
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.8e-86 323.6 326 50.6
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 1.2e-85 320.9 346 48.8
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 9.9e-85 317.8 340 47.4
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 7.6e-77 291.6 336 50.3
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 3.5e-74 282.7 325 44.6
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 1.5e-69 267.3 272 62.9
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 3.4e-69 266.2 345 40.3
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 9.3e-67 258.1 217 56.7
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 2.7e-66 256.5 237 50.2
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 4.6e-66 255.8 223 53.8
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 7.9e-66 255.0 217 56.2
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 6.2e-63 245.4 222 61.7
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 2.6e-61 240.0 218 60.6
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 2.6e-61 240.0 223 66.4
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 1.3e-60 237.7 208 54.3
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 1.9e-59 233.8 379 35.4
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 1.9e-59 233.8 336 39.6
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 3.2e-59 233.0 209 62.2
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 3.2e-59 233.0 209 62.2
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 3.5e-58 229.6 219 51.6
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.3e-57 227.6 220 47.3
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 1.3e-52 211.1 225 48.4
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 1.1e-51 208.0 185 54.1
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 6.0e-50 202.2 372 33.6
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 9.7e-48 194.9 175 55.4
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 8.2e-47 191.8 182 69.2
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 4.1e-46 189.5 175 54.3
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 2.3e-41 173.7 315 37.5
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 1.5e-40 171.0 190 45.8
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 7.4e-40 168.7 193 46.6
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 2.8e-39 166.8 200 42.5
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 4.2e-35 152.9 442 28.1
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 5.9e-29 132.5 98 65.3
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 2.1e-26 124.0 256 37.5
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 2.0e-24 117.5 421 26.6
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 5.7e-24 115.9 76 69.7
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.3e-23 114.8 94 58.5
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 2.4e-22 110.5 84 57.1
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 9.1e-22 108.6 340 29.7
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.8e-17 94.4 142 38.0
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 2.0e-16 90.9 73 58.9
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.6e-13 81.3 101 47.5
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 3.8e-12 76.6 98 43.9
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 1.6e-10 71.2 65 47.7


User provided reference genes

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