Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 1.5e-72 276.2 148 100.0
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 2.2e-39 166.0 99 92.9
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 9.8e-32 140.6 103 76.7
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 1.3e-31 140.2 102 77.5
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 3.5e-29 132.1 86 81.4
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.6e-29 131.7 107 72.0
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 7.8e-29 131.0 85 80.0
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.7e-28 129.8 104 73.1
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 2.3e-28 129.4 96 75.0
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.9e-28 128.6 99 74.7
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.9e-28 128.6 99 74.7
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.9e-28 128.6 99 74.7
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 5.0e-28 128.3 94 75.5
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 5.0e-28 128.3 101 69.3
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 6.6e-28 127.9 86 80.2
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.9e-27 126.3 94 74.5
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 2.5e-27 125.9 87 77.0
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 3.3e-27 125.6 85 78.8
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 3.3e-27 125.6 103 68.0
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 4.3e-27 125.2 86 75.6
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 4.3e-27 125.2 87 74.7
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 5.6e-27 124.8 82 82.9
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 5.6e-27 124.8 82 82.9
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 5.6e-27 124.8 90 74.4
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 7.3e-27 124.4 99 73.7
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 9.5e-27 124.0 87 74.7
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 2.1e-26 122.9 93 72.0
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 2.1e-26 122.9 85 76.5
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 2.8e-26 122.5 100 67.0
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 2.8e-26 122.5 86 73.3
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 2.8e-26 122.5 109 61.5
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 2.8e-26 122.5 82 80.5
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 4.7e-26 121.7 96 70.8
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 4.7e-26 121.7 83 78.3
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 1.1e-25 120.6 86 74.4
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.4e-25 120.2 93 72.0
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 2.3e-25 119.4 83 75.9
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 2.3e-25 119.4 87 71.3
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 3.1e-25 119.0 84 71.4
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 6.8e-25 117.9 79 79.7
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 6.8e-25 117.9 84 73.8
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 6.8e-25 117.9 82 78.0
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 6.8e-25 117.9 82 76.8
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 1.5e-24 116.7 101 68.3
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 2.0e-24 116.3 82 75.6
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 2.0e-24 116.3 97 67.0
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 3.4e-24 115.5 86 73.3
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 3.4e-24 115.5 104 66.3
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 3.4e-24 115.5 96 69.8
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 3.4e-24 115.5 84 70.2
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 3.4e-24 115.5 94 67.0
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 4.4e-24 115.2 105 65.7
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 5.8e-24 114.8 84 67.9
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 5.8e-24 114.8 95 64.2
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 5.8e-24 114.8 84 72.6
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 7.5e-24 114.4 84 69.0
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 7.5e-24 114.4 83 75.9
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 9.8e-24 114.0 96 62.5
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 9.8e-24 114.0 84 71.4
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 9.8e-24 114.0 79 75.9
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 9.8e-24 114.0 81 72.8
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 9.8e-24 114.0 81 72.8
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.3e-23 113.6 104 65.4
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 2.9e-23 112.5 95 66.3
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 3.7e-23 112.1 92 68.5
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 3.7e-23 112.1 100 66.0
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 3.7e-23 112.1 100 63.0
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 3.7e-23 112.1 95 65.3
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 4.9e-23 111.7 100 66.0
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 4.9e-23 111.7 82 74.4
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 6.4e-23 111.3 99 63.6
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 6.4e-23 111.3 82 73.2
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 6.4e-23 111.3 82 73.2
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 6.4e-23 111.3 92 66.3
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 6.4e-23 111.3 85 70.6
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 8.3e-23 110.9 121 52.1
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 8.3e-23 110.9 101 63.4
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 1.9e-22 109.8 82 74.4
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 2.4e-22 109.4 79 72.2
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 4.1e-22 108.6 80 75.0
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 5.4e-22 108.2 79 73.4
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 5.4e-22 108.2 83 67.5
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 9.2e-22 107.5 96 61.5
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 1.6e-21 106.7 96 60.4
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 1.6e-21 106.7 82 69.5
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 1.6e-21 106.7 80 70.0
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 1.6e-21 106.7 90 62.2
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 2.1e-21 106.3 82 70.7
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 2.7e-21 105.9 80 68.8
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 2.7e-21 105.9 82 69.5
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 3.5e-21 105.5 82 70.7
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 3.5e-21 105.5 93 61.3
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 3.5e-21 105.5 81 69.1
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 7.8e-21 104.4 86 61.6
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 7.8e-21 104.4 98 56.1
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 1.0e-20 104.0 95 60.0
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 1.0e-20 104.0 82 68.3
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 1.7e-20 103.2 84 64.3
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 1.7e-20 103.2 77 72.7
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.7e-20 103.2 86 69.8
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 1.7e-20 103.2 96 59.4
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 3.0e-20 102.4 96 62.5
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 3.0e-20 102.4 96 62.5
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 3.0e-20 102.4 96 58.3
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 3.0e-20 102.4 83 63.9
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 3.0e-20 102.4 83 63.9
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 3.9e-20 102.1 90 63.3
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 5.1e-20 101.7 90 63.3
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 5.1e-20 101.7 90 62.2
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 5.1e-20 101.7 90 63.3
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 5.1e-20 101.7 87 63.2
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 6.6e-20 101.3 99 61.6
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 6.6e-20 101.3 93 63.4
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 6.6e-20 101.3 99 61.6
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 8.6e-20 100.9 82 65.9
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 8.6e-20 100.9 91 62.6
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 1.1e-19 100.5 93 57.0
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.1e-19 100.5 81 67.9
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 1.9e-19 99.8 82 64.6
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 1.9e-19 99.8 87 57.5
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 5.6e-19 98.2 77 63.6
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 5.6e-19 98.2 75 70.7
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 7.3e-19 97.8 96 56.2
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 9.5e-19 97.4 80 60.0
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 1.2e-18 97.1 93 61.3
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 3.1e-17 92.4 84 58.3
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 1.2e-16 90.5 77 63.6
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 2.0e-16 89.7 77 63.6
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 3.4e-16 89.0 73 63.0
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 4.4e-16 88.6 83 60.2
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 2.2e-15 86.3 83 59.0
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 4.9e-15 85.1 79 55.7
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 6.4e-15 84.7 79 54.4
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 1.7e-12 76.6 102 46.1
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.5e-11 73.6 83 55.4
unitig_8.g2920 Utricularia gibba HOM05D005452 ORTHO05D006618 5.6e-11 71.6 52 75.0
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 5.6e-11 71.6 95 45.3
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 2.1e-10 69.7 65 60.0
Medtr3g450960 Medicago truncatula HOM05D005452 ORTHO05D006618 2.6e-08 62.8 56 62.5
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 9.9e-08 60.8 74 54.1
Nn1g09342 Nelumbo nucifera HOM05D005452 ORTHO05D006618 8.4e-07 57.8 66 48.5


User provided reference genes

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