Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold292G47408 Striga asiatica HOM05D000129 ORTHO05D402191 5.2e-117 424.5 225 100.0
SGA_v2.0_scaffold112G31627 Striga asiatica HOM05D000129 ORTHO05D000144 6.3e-14 82.0 45 88.9
Oeu012388.2 Olea europaea HOM05D000129 ORTHO05D000144 2.2e-11 73.6 45 75.6
Migut.J00781 Erythranthe guttata HOM05D000129 ORTHO05D000144 8.5e-11 71.6 45 73.3
Hma1.2p1_0478F.1_g161190 Hydrangea macrophylla HOM05D000129 ORTHO05D000144 8.5e-11 71.6 45 77.8
MSTRG.19361 Avicennia marina HOM05D000129 ORTHO05D000144 1.5e-10 70.9 45 75.6
unitig_749.g14200 Utricularia gibba HOM05D000129 ORTHO05D000144 1.5e-10 70.9 45 77.8
Hma1.2p1_0478F.1_g161160 Hydrangea macrophylla HOM05D000129 ORTHO05D000144 1.9e-10 70.5 77 49.4
Lju50A4G44 Lonicera japonica HOM05D000129 ORTHO05D000144 3.2e-10 69.7 45 73.3
TWI34G1012 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 5.5e-10 68.9 45 73.3
PGR142G2354 Punica granatum HOM05D000129 ORTHO05D000144 7.2e-10 68.6 45 73.3
QL02p064569 Quercus lobata HOM05D000129 ORTHO05D000144 3.6e-09 66.2 45 73.3
FvH4_4g06940 Fragaria vesca HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 64.4
FAN07G1214 Fragaria x ananassa HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 64.4
FAN12G3374 Fragaria x ananassa HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 64.4
FAN17G2302 Fragaria x ananassa HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 64.4
FAN22G1460 Fragaria x ananassa HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 64.4
Hma1.2p1_0235F.1_g098780 Hydrangea macrophylla HOM05D000129 ORTHO05D000144 6.1e-09 65.5 45 66.7
Sc18g0003810 Simmondsia chinensis HOM05D000129 ORTHO05D000144 6.1e-09 65.5 62 54.8
CSS0010408 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 8.0e-09 65.1 45 68.9
Nitab4.5_0005355g0010 Nicotiana tabacum HOM05D000129 ORTHO05D000144 1.0e-08 64.7 45 66.7
Eucgr.C00094 Eucalyptus grandis HOM05D000129 ORTHO05D000144 1.4e-08 64.3 45 68.9
Glyma.15G001300 Glycine max HOM05D000129 ORTHO05D000144 1.4e-08 64.3 45 68.9
Rhsim08G0248600 Rhododendron simsii HOM05D000129 ORTHO05D000144 1.4e-08 64.3 45 66.7
CANSAT01G0630 Cannabis sativa HOM05D000129 ORTHO05D000144 2.3e-08 63.5 45 64.4
CiPaw.07G198800 Carya illinoinensis HOM05D000129 ORTHO05D000144 2.3e-08 63.5 45 66.7
RcHm_v2.0_Chr4g0398951 Rosa chinensis HOM05D000129 ORTHO05D000144 2.3e-08 63.5 45 62.2
HPP92_021938 Vanilla planifolia HOM05D000129 ORTHO05D000144 2.3e-08 63.5 45 64.4
HPP92_021965 Vanilla planifolia HOM05D000129 ORTHO05D000144 2.3e-08 63.5 45 64.4
CAN.G403.2 Capsicum annuum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 68.9
Gohir.A08G017200 Gossypium hirsutum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 64.4
Nitab4.5_0000028g0420 Nicotiana tabacum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 64.4
Nitab4.5_0004916g0030 Nicotiana tabacum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 64.4
Nitab4.5_0006823g0020 Nicotiana tabacum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 64.4
Solyc07g008320.3 Solanum lycopersicum HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 66.7
Sopen07g004210 Solanum pennellii HOM05D000129 ORTHO05D000144 3.0e-08 63.2 45 66.7
BcaB08g36003 Brassica carinata HOM05D000129 ORTHO05D000144 4.0e-08 62.8 74 48.6
MD09G1160300 Malus domestica HOM05D000129 ORTHO05D000144 4.0e-08 62.8 45 68.9
Peaxi162Scf00046g00530 Petunia axillaris HOM05D000129 ORTHO05D000144 4.0e-08 62.8 46 65.2
TWI63G1554 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 4.0e-08 62.8 74 45.9
vmacro18757 Vaccinium macrocarpon HOM05D000129 ORTHO05D000144 5.2e-08 62.4 45 66.7
CSS0027052 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000144 6.7e-08 62.0 74 45.9
Cc06_g17400 Coffea canephora HOM05D000129 ORTHO05D000144 6.7e-08 62.0 45 62.2
RcHm_v2.0_Chr4g0398891 Rosa chinensis HOM05D000129 ORTHO05D000144 6.7e-08 62.0 45 60.0
Hund06697 Selenicereus undatus HOM05D000129 ORTHO05D000144 6.7e-08 62.0 45 64.4
SGA_v2.0_scaffold392G50653 Striga asiatica HOM05D000129 ORTHO05D000144 6.7e-08 62.0 42 71.4
Glyma.13G372400 Glycine max HOM05D000129 ORTHO05D000144 8.8e-08 61.6 45 64.4
Gohir.D08G027700 Gossypium hirsutum HOM05D000129 ORTHO05D000144 8.8e-08 61.6 45 64.4
Gorai.004G024800 Gossypium raimondii HOM05D000129 ORTHO05D000144 8.8e-08 61.6 45 64.4
Rhsim03G0267700 Rhododendron simsii HOM05D000129 ORTHO05D000144 8.8e-08 61.6 47 63.8
TWI12G1121 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 8.8e-08 61.6 45 66.7
VMungo1309G0658 Vigna mungo HOM05D000129 ORTHO05D000144 8.8e-08 61.6 45 64.4
Lj9A175T32 Lonicera japonica HOM05D000129 ORTHO05D000144 1.1e-07 61.2 57 56.1
Oeu005634.1 Olea europaea HOM05D000129 ORTHO05D011340 1.1e-07 61.2 47 61.7
Phvul.009G234600 Phaseolus vulgaris HOM05D000129 ORTHO05D000144 1.1e-07 61.2 45 64.4
TWI63G0331 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 1.1e-07 61.2 74 45.9
TAR626G1733 Trochodendron aralioides HOM05D000129 ORTHO05D000144 1.1e-07 61.2 48 60.4
Ah.09g228550 Amaranthus hybridus HOM05D000129 ORTHO05D000144 1.5e-07 60.8 45 64.4
BcaC04g20012 Brassica carinata HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
A10p14430 Brassica napus HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
C09p48800 Brassica napus HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
BolC9t57727H Brassica oleracea HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
BraA10t43534Z Brassica rapa HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
CARHR270880 Cardamine hirsuta HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
Dinv20352 Davidia involucrata HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 47.3
Nitab4.5_0007852g0010 Nicotiana tabacum HOM05D000129 ORTHO05D000144 1.5e-07 60.8 44 63.6
Oeu035449.1 Olea europaea HOM05D000129 ORTHO05D000144 1.5e-07 60.8 74 45.9
Atru.chr7.923 Acer truncatum HOM05D000129 ORTHO05D000144 2.0e-07 60.5 74 43.2
CAN.G790.21 Capsicum annuum HOM05D000129 ORTHO05D000144 2.0e-07 60.5 74 45.9
ECA236G3145 Erigeron canadensis HOM05D000129 ORTHO05D000144 2.0e-07 60.5 45 64.4
Lj6g0025922 Lotus japonicus HOM05D000129 ORTHO05D000144 2.0e-07 60.5 45 64.4
Lalb_Chr12g0199671 Lupinus albus HOM05D000129 ORTHO05D000144 2.0e-07 60.5 45 60.0
Nitab4.5_0004695g0010 Nicotiana tabacum HOM05D000129 ORTHO05D000144 2.0e-07 60.5 45 64.4
BcaC09g50662 Brassica carinata HOM05D000129 ORTHO05D000144 2.6e-07 60.1 72 44.4
C01p21770 Brassica napus HOM05D000129 ORTHO05D000144 2.6e-07 60.1 72 44.4
BolC1t02101H Brassica oleracea HOM05D000129 ORTHO05D000144 2.6e-07 60.1 72 44.4
Ciclev10007305m.g Citrus clementina HOM05D000129 ORTHO05D000144 2.6e-07 60.1 74 44.6
Eucgr.D01503 Eucalyptus grandis HOM05D000129 ORTHO05D000144 2.6e-07 60.1 45 64.4
Glyma.15G167500 Glycine max HOM05D000129 ORTHO05D000144 2.6e-07 60.1 45 64.4
Lj5C611G7 Lonicera japonica HOM05D000129 ORTHO05D000144 2.6e-07 60.1 46 67.4
Nitab4.5_0001691g0150 Nicotiana tabacum HOM05D000129 ORTHO05D000144 2.6e-07 60.1 65 50.8
Oeu005621.1 Olea europaea HOM05D000129 ORTHO05D000144 2.6e-07 60.1 45 64.4
BcaNung03781 Brassica carinata HOM05D000129 ORTHO05D000144 3.3e-07 59.7 72 43.1
HanXRQChr10g0309001 Helianthus annuus HOM05D000129 ORTHO05D000144 3.3e-07 59.7 45 62.2
Lj9C159G2 Lonicera japonica HOM05D000129 ORTHO05D000144 3.3e-07 59.7 45 62.2
Sp6g18840 Schrenkiella parvula HOM05D000129 ORTHO05D000144 3.3e-07 59.7 74 44.6
CDE05G0611 Ceratophyllum demersum HOM05D000129 ORTHO05D000144 5.7e-07 58.9 45 62.2
Dinv41196 Davidia involucrata HOM05D000129 ORTHO05D000144 5.7e-07 58.9 74 45.9
Psat1g143200 Pisum sativum HOM05D000129 ORTHO05D000144 5.7e-07 58.9 45 62.2
TAR369G0135 Trochodendron aralioides HOM05D000129 ORTHO05D000144 5.7e-07 58.9 45 62.2
HPP92_020632 Vanilla planifolia HOM05D000129 ORTHO05D000144 5.7e-07 58.9 45 62.2
Haze_22045 Corylus avellana HOM05D000129 ORTHO05D000144 7.5e-07 58.5 45 62.2
MBI16_g09354_MAGBIO Magnolia biondii HOM05D000129 ORTHO05D000144 7.5e-07 58.5 74 45.9
MD17G1146100 Malus domestica HOM05D000129 ORTHO05D000144 7.5e-07 58.5 45 64.4
BcaB05g22317 Brassica carinata HOM05D000129 ORTHO05D000144 9.7e-07 58.2 74 43.2
BcaC03g14183 Brassica carinata HOM05D000129 ORTHO05D000144 9.7e-07 58.2 74 43.2
BcaC03g14184 Brassica carinata HOM05D000129 ORTHO05D000144 9.7e-07 58.2 74 43.2
C02p14610 Brassica napus HOM05D000129 ORTHO05D000144 9.7e-07 58.2 74 43.2
BolC2t07588H Brassica oleracea HOM05D000129 ORTHO05D000144 9.7e-07 58.2 74 43.2
Duzib170G0665 Durio zibethinus HOM05D000129 ORTHO05D000144 9.7e-07 58.2 45 60.0
HanXRQChr06g0181401 Helianthus annuus HOM05D000129 ORTHO05D000144 9.7e-07 58.2 45 62.2
Oeu035445.1 Olea europaea HOM05D000129 ORTHO05D011340 9.7e-07 58.2 45 62.2
Peaxi162Scf00038g02537 Petunia axillaris HOM05D000129 ORTHO05D000144 9.7e-07 58.2 45 62.2
Zm00001eb233610 Zea mays HOM05D000129 ORTHO05D000144 9.7e-07 58.2 45 57.8
Actinidia29961 Actinidia chinensis HOM05D000129 ORTHO05D000144 1.3e-06 57.8 45 57.8
DCAR_018013 Daucus carota HOM05D000129 ORTHO05D000144 1.3e-06 57.8 45 62.2
Eucgr.C02215 Eucalyptus grandis HOM05D000129 ORTHO05D000144 1.3e-06 57.8 74 45.9
Glyma.09G061200 Glycine max HOM05D000129 ORTHO05D000144 1.3e-06 57.8 45 62.2
THA.LOC104811763 Tarenaya hassleriana HOM05D000129 ORTHO05D000144 1.3e-06 57.8 45 57.8
Zm00001eb314650 Zea mays HOM05D000129 ORTHO05D000144 1.3e-06 57.8 72 41.7
AL8G33030 Arabidopsis lyrata HOM05D000129 ORTHO05D000144 1.7e-06 57.4 46 58.7
Carub.0003s2114 Capsella rubella HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 60.0
Cpa.g.sc115.64 Carica papaya HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 60.0
AUR62027427 Chenopodium quinoa HOM05D000129 ORTHO05D000144 1.7e-06 57.4 46 58.7
HanXRQChr05g0142111 Helianthus annuus HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 64.4
Lj3g0005874 Lotus japonicus HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 66.7
Medtr2g038310 Medicago truncatula HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 60.0
Oeu044661.1 Olea europaea HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 60.0
Potri.018G139800 Populus trichocarpa HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 62.2
Sabra10G0195000 Salix brachista HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 64.4
Sopen03g041630 Solanum pennellii HOM05D000129 ORTHO05D000144 1.7e-06 57.4 74 43.2
TWI63G0127 Tripterygium wilfordii HOM05D000129 ORTHO05D000144 1.7e-06 57.4 74 43.2
HPP92_020629 Vanilla planifolia HOM05D000129 ORTHO05D000144 1.7e-06 57.4 45 60.0
arahy.Tifrunner.gnm1.ann1.Z0JMUR Arachis hypogaea HOM05D000129 ORTHO05D000144 2.2e-06 57.0 45 62.2
A01p17290 Brassica napus HOM05D000129 ORTHO05D000144 2.2e-06 57.0 72 41.7
A02p08720 Brassica napus HOM05D000129 ORTHO05D000144 2.2e-06 57.0 74 41.9
BraA01t01684Z Brassica rapa HOM05D000129 ORTHO05D000144 2.2e-06 57.0 72 41.7
BraA02t05942Z Brassica rapa HOM05D000129 ORTHO05D000144 2.2e-06 57.0 74 41.9
CARHR097050 Cardamine hirsuta HOM05D000129 ORTHO05D000144 2.2e-06 57.0 45 60.0
Cfa013468 Carpinus fangiana HOM05D000129 ORTHO05D000144 2.2e-06 57.0 45 62.2
AUR62031270 Chenopodium quinoa HOM05D000129 ORTHO05D000144 2.2e-06 57.0 46 58.7
Cc04_g00330 Coffea canephora HOM05D000129 ORTHO05D000144 2.2e-06 57.0 45 60.0
Sabra06G0054300 Salix brachista HOM05D000129 ORTHO05D000144 2.2e-06 57.0 43 62.8
Thhalv10012523m.g Eutrema salsugineum HOM05D000129 ORTHO05D000144 2.8e-06 56.6 74 43.2
Potri.018G139900 Populus trichocarpa HOM05D000129 ORTHO05D000144 2.8e-06 56.6 43 60.5
arahy.Tifrunner.gnm1.ann1.GJ0FTP Arachis hypogaea HOM05D000129 ORTHO05D000144 3.7e-06 56.2 45 62.2
Carub.0008s1761 Capsella rubella HOM05D000129 ORTHO05D000144 3.7e-06 56.2 74 41.9
Duzib235G0196 Durio zibethinus HOM05D000129 ORTHO05D000144 3.7e-06 56.2 46 63.0
Lsat_1_v5_gn_5_84040 Lactuca sativa HOM05D000129 ORTHO05D000144 3.7e-06 56.2 45 62.2
Manes.06G017700 Manihot esculenta HOM05D000129 ORTHO05D000144 3.7e-06 56.2 45 55.6
THA.LOC104817924 Tarenaya hassleriana HOM05D000129 ORTHO05D000144 3.7e-06 56.2 45 62.2
AT5G57110 Arabidopsis thaliana HOM05D000129 ORTHO05D000144 4.8e-06 55.8 74 41.9
Cpa.g.sc67.9 Carica papaya HOM05D000129 ORTHO05D000144 4.8e-06 55.8 45 57.8
Ca_20494_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000144 4.8e-06 55.8 45 64.4
Ca_20495_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000144 4.8e-06 55.8 45 64.4
ECA234G3457 Erigeron canadensis HOM05D000129 ORTHO05D000144 4.8e-06 55.8 45 60.0
Manes.14G162600 Manihot esculenta HOM05D000129 ORTHO05D000144 4.8e-06 55.8 45 57.8
QL03p031255 Quercus lobata HOM05D000129 ORTHO05D011340 4.8e-06 55.8 46 56.5
Thecc.09G191600 Theobroma cacao HOM05D000129 ORTHO05D000144 4.8e-06 55.8 74 44.6
Aa31LG3G13010 Aethionema arabicum HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
AL3G35180 Arabidopsis lyrata HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
AT3G21180 Arabidopsis thaliana HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
arahy.Tifrunner.gnm1.ann1.KE4T51 Arachis hypogaea HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
arahy.Tifrunner.gnm1.ann1.WPXT30 Arachis hypogaea HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
Potri.006G072900 Populus trichocarpa HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 57.8
Zm00001eb317200 Zea mays HOM05D000129 ORTHO05D000144 6.3e-06 55.5 45 53.3
Cpa.g.sc67.8 Carica papaya HOM05D000129 ORTHO05D000144 8.2e-06 55.1 45 55.6
Ca_02126_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000144 8.2e-06 55.1 45 57.8
Eucgr.C02428 Eucalyptus grandis HOM05D000129 ORTHO05D000144 8.2e-06 55.1 45 57.8
Thecc.06G065100 Theobroma cacao HOM05D000129 ORTHO05D000144 8.2e-06 55.1 46 63.0
TPR.G15699 Trifolium pratense HOM05D000129 ORTHO05D000144 8.2e-06 55.1 45 66.7


User provided reference genes

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