Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.4e-107 392.9 195 100.0
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.2e-63 246.1 157 77.1
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 2.0e-61 239.6 158 77.2
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.6e-56 222.6 157 73.9
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.3e-55 220.3 157 73.9
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 8.3e-55 217.6 157 71.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 4.7e-50 201.8 135 76.3
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 4.7e-50 201.8 129 76.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 8.1e-50 201.1 154 66.9
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.1e-49 200.7 153 65.4
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.1e-49 200.7 159 62.3
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.4e-49 200.3 126 77.0
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 1.8e-49 199.9 154 66.9
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 1.8e-49 199.9 154 65.6
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.1e-49 199.1 129 75.2
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 3.1e-49 199.1 139 74.8
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 4.0e-49 198.7 159 62.9
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 5.2e-49 198.4 148 67.6
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 6.8e-49 198.0 159 62.3
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 6.8e-49 198.0 157 66.9
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 8.9e-49 197.6 125 80.0
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 8.9e-49 197.6 159 62.3
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.2e-48 197.2 125 77.6
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.2e-48 197.2 129 74.4
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 2.0e-48 196.4 129 72.9
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.0e-48 196.4 129 76.0
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 2.0e-48 196.4 154 64.3
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.6e-48 196.1 126 76.2
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 3.4e-48 195.7 159 61.6
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 4.4e-48 195.3 133 75.2
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 4.4e-48 195.3 157 63.7
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 4.4e-48 195.3 127 74.8
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 5.8e-48 194.9 125 76.0
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 9.9e-48 194.1 155 65.2
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 9.9e-48 194.1 123 77.2
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.3e-47 193.7 130 71.5
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 1.7e-47 193.4 125 76.0
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.9e-47 192.6 125 75.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.9e-47 192.6 159 60.4
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.9e-47 192.6 159 60.4
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 4.9e-47 191.8 153 64.1
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 4.9e-47 191.8 148 63.5
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 6.4e-47 191.4 156 63.5
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 6.4e-47 191.4 129 72.9
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 6.4e-47 191.4 125 75.2
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 8.3e-47 191.0 124 74.2
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 8.3e-47 191.0 124 74.2
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.1e-46 190.7 126 72.2
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.4e-46 190.3 125 73.6
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 1.4e-46 190.3 153 63.4
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.9e-46 189.9 126 73.0
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 5.4e-46 188.3 130 71.5
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 7.1e-46 188.0 154 60.4
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 7.1e-46 188.0 153 62.7
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 7.1e-46 188.0 156 61.5
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 7.1e-46 188.0 125 75.2
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 9.2e-46 187.6 125 72.8
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.2e-45 187.2 124 73.4
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 1.2e-45 187.2 154 62.3
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.6e-45 186.8 126 70.6
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 2.1e-45 186.4 154 63.0
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 2.1e-45 186.4 123 74.8
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 2.1e-45 186.4 127 72.4
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 3.5e-45 185.7 159 59.1
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 3.5e-45 185.7 125 72.8
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 6.0e-45 184.9 125 75.2
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 7.8e-45 184.5 129 72.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.3e-44 183.7 128 71.1
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.0e-44 182.6 125 71.2
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 3.9e-44 182.2 125 69.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 5.1e-44 181.8 154 61.7
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 5.1e-44 181.8 125 72.0
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 6.6e-44 181.4 138 64.5
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.1e-43 180.6 125 72.8
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 4.3e-43 178.7 135 63.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 9.5e-43 177.6 132 66.7
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 2.8e-42 176.0 125 70.4
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 3.6e-42 175.6 124 67.7
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 8.1e-42 174.5 128 71.1
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.1e-41 174.1 124 69.4
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.1e-41 174.1 126 69.0
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 1.8e-41 173.3 116 73.3
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 2.4e-41 172.9 125 69.6
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 5.2e-41 171.8 128 63.3
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 6.8e-41 171.4 136 65.4
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 8.9e-41 171.0 125 68.0
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.0e-40 169.9 139 62.6
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.6e-40 169.5 158 56.3
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 5.8e-40 168.3 128 66.4
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 5.8e-40 168.3 128 66.4
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 2.9e-39 166.0 123 65.9
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 3.8e-39 165.6 130 63.8
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.8e-39 165.6 128 65.6
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 3.2e-38 162.5 138 62.3
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 9.2e-38 161.0 125 64.8
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 1.6e-37 160.2 125 65.6
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 1.6e-37 160.2 134 61.9
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 2.1e-37 159.8 154 53.2
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.1e-37 159.8 129 62.8
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 6.0e-37 158.3 131 61.8
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 7.8e-37 157.9 125 65.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 5.1e-36 155.2 126 64.3
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.2e-34 150.6 150 55.3
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 3.1e-33 146.0 129 58.1
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-32 144.1 123 61.8
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 2.1e-29 133.3 120 54.2
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 2.3e-28 129.8 125 52.8
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 2.8e-26 122.9 106 60.4
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 2.8e-26 122.9 123 52.8
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 1.1e-25 120.9 123 52.0
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.4e-25 120.6 80 71.2
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 2.6e-24 116.3 120 50.0
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.1e-22 110.9 130 43.1
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.2e-21 107.5 120 47.5
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 2.7e-21 106.3 104 49.0
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 3.5e-21 105.9 123 48.0
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 9.6e-19 97.8 115 47.8
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 4.8e-18 95.5 90 58.9
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 9.0e-17 91.3 122 41.8
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.5e-16 90.5 81 49.4
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 4.6e-13 79.0 153 35.3
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 7.9e-13 78.2 64 67.2
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 8.2e-10 68.2 90 46.7
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 8.2e-10 68.2 117 35.0


User provided reference genes

Program Settings