Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 4.1e-114 414.8 227 100.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 3.8e-83 312.0 219 74.4
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 7.1e-82 307.8 175 82.9
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 1.3e-78 297.0 174 81.0
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 2.8e-78 295.8 197 75.1
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.4e-77 293.5 176 79.0
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 6.9e-77 291.2 172 80.8
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.2e-76 290.4 174 78.7
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.2e-76 290.4 176 75.6
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 1.5e-76 290.0 172 80.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 2.0e-76 289.7 176 75.6
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 3.4e-76 288.9 174 79.9
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 4.5e-76 288.5 172 78.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.0e-75 287.3 174 78.7
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.0e-75 287.3 176 75.0
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.7e-75 286.6 173 79.2
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.7e-75 286.6 178 77.5
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.8e-75 285.4 178 77.5
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 3.8e-75 285.4 175 76.0
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.9e-75 285.0 178 76.4
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 6.5e-75 284.6 174 78.2
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.4e-75 284.3 174 77.0
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 8.4e-75 284.3 171 77.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.1e-74 283.9 174 76.4
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.5e-74 282.7 177 76.8
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.2e-74 282.3 213 66.7
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 3.2e-74 282.3 184 75.5
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.2e-74 282.0 178 76.4
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 5.5e-74 281.6 169 78.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 7.1e-74 281.2 173 78.0
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 7.1e-74 281.2 173 78.0
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 9.3e-74 280.8 174 77.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 9.3e-74 280.8 174 77.6
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 3.5e-73 278.9 174 74.1
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 4.6e-73 278.5 174 75.9
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 6.0e-73 278.1 174 77.0
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.0e-72 277.3 174 77.0
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.3e-72 276.2 177 74.0
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 6.7e-72 274.6 174 74.7
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 8.7e-72 274.2 174 73.6
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 8.7e-72 274.2 173 72.8
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.1e-71 273.9 174 74.7
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 1.1e-71 273.9 172 75.6
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.5e-71 272.7 170 75.3
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.5e-71 272.7 221 62.9
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.3e-71 272.3 174 74.1
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 5.7e-71 271.6 172 75.0
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 5.7e-71 271.6 174 73.6
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 5.7e-71 271.6 174 72.4
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.6e-70 270.0 175 73.7
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 2.8e-70 269.2 207 65.7
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 3.7e-70 268.9 174 72.4
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 3.7e-70 268.9 174 72.4
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 6.2e-70 268.1 174 72.4
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 8.2e-70 267.7 211 60.2
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 8.2e-70 267.7 211 60.2
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.1e-69 267.3 179 71.5
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 6.9e-69 264.6 174 70.1
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.2e-68 263.8 174 71.3
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.5e-68 263.5 174 71.3
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 2.0e-68 263.1 173 70.5
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 2.6e-68 262.7 172 72.1
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 71.4
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 70.3
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 70.3
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 70.3
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 70.3
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.3e-67 260.4 175 70.3
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.7e-67 260.0 172 72.7
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.7e-67 260.0 174 69.5
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.7e-67 260.0 174 68.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 3.8e-67 258.8 174 69.0
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 3.8e-67 258.8 175 68.0
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 3.8e-67 258.8 176 71.6
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 5.0e-67 258.5 171 70.8
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 6.5e-67 258.1 172 70.3
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 6.5e-67 258.1 199 65.3
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 1.4e-66 256.9 174 69.5
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 1.2e-65 253.8 225 62.2
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 4.6e-65 251.9 175 68.6
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 5.1e-64 248.4 140 82.9
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 9.7e-63 244.2 169 67.5
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 8.2e-62 241.1 176 68.2
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.1e-61 240.7 176 68.2
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.0e-61 237.7 144 77.1
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.5e-60 235.3 174 68.4
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.3e-59 233.8 146 77.4
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 8.5e-59 231.1 153 70.6
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.2e-58 229.2 175 65.7
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 6.7e-56 221.5 133 78.2
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 8.8e-56 221.1 146 71.9
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 9.7e-55 217.6 137 72.3
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.3e-54 217.2 174 61.5
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 2.8e-54 216.1 177 62.7
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 4.5e-52 208.8 171 60.8
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 7.7e-52 208.0 159 65.4
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 8.5e-51 204.5 181 59.7
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.6e-49 200.3 167 56.3
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 2.7e-49 199.5 143 68.5
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.1e-47 194.1 189 54.5
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 7.4e-47 191.4 165 53.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 6.3e-46 188.3 125 74.4
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 4.1e-45 185.7 170 52.4
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.2e-44 184.1 126 68.3
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 1.5e-44 183.7 159 59.7
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.5e-39 167.2 174 49.4
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.4e-37 160.6 178 49.4
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 7.7e-36 154.8 92 75.0
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 5.0e-35 152.1 124 60.5
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 2.7e-33 146.4 107 68.2
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 4.4e-31 139.0 113 61.1
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 5.7e-31 138.7 99 65.7
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.7e-30 136.0 86 74.4
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 5.0e-27 125.6 84 70.2
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 8.5e-27 124.8 113 57.5
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 3.2e-26 122.9 119 52.1
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 1.2e-25 120.9 129 51.2
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 1.8e-24 117.1 85 63.5
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 1.5e-23 114.0 71 80.3
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 2.2e-22 110.2 62 79.0
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 1.0e-19 101.3 119 47.1
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 6.6e-19 98.6 99 55.6
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 1.6e-17 94.0 54 79.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 4.9e-14 82.4 69 63.8
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 2.7e-12 76.6 109 36.7
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 5.9e-12 75.5 42 81.0
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 3.3e-10 69.7 48 70.8
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 1.0e-08 64.7 36 83.3
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 7.5e-07 58.5 42 61.9


User provided reference genes

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