Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G12052 Striga asiatica HOM05D005690 ORTHO05D007075 6.1e-126 454.1 225 100.0
Cc02_g11390 Coffea canephora HOM05D005690 ORTHO05D007075 2.5e-87 325.9 236 71.6
Manes.07G103000 Manihot esculenta HOM05D005690 ORTHO05D007075 2.3e-85 319.3 239 70.7
GSVIVG01016316001 Vitis vinifera HOM05D005690 ORTHO05D007075 2.3e-85 319.3 242 71.1
MSTRG.373 Avicennia marina HOM05D005690 ORTHO05D007075 4.0e-85 318.5 239 72.8
Gorai.010G204700 Gossypium raimondii HOM05D005690 ORTHO05D007075 3.7e-83 312.0 241 68.9
Glyma.17G183500 Glycine max HOM05D005690 ORTHO05D007075 4.9e-83 311.6 242 68.2
Phvul.004G075000 Phaseolus vulgaris HOM05D005690 ORTHO05D007075 6.4e-83 311.2 242 68.6
COL.COLO4_32034 Corchorus olitorius HOM05D005690 ORTHO05D007075 8.3e-83 310.8 242 69.0
Gohir.D06G176800 Gossypium hirsutum HOM05D005690 ORTHO05D007075 8.3e-83 310.8 241 68.5
VMungo0464G0948 Vigna mungo HOM05D005690 ORTHO05D007075 8.3e-83 310.8 242 68.6
THA.LOC104802837 Tarenaya hassleriana HOM05D005690 ORTHO05D007075 1.1e-82 310.5 243 67.9
Thecc.10G069500 Theobroma cacao HOM05D005690 ORTHO05D007075 1.1e-82 310.5 241 68.0
Gohir.A06G178200 Gossypium hirsutum HOM05D005690 ORTHO05D007075 3.2e-82 308.9 241 68.0
MD01G1111700 Malus domestica HOM05D005690 ORTHO05D007075 3.2e-82 308.9 242 66.5
Ciclev10032614m.g Citrus clementina HOM05D005690 ORTHO05D007075 9.2e-82 307.4 242 69.4
CiPaw.02G175700 Carya illinoinensis HOM05D005690 ORTHO05D007075 1.2e-81 307.0 244 68.0
Nn2g13015 Nelumbo nucifera HOM05D005690 ORTHO05D007075 1.6e-81 306.6 183 81.4
Dinv11797 Davidia involucrata HOM05D005690 ORTHO05D007075 2.1e-81 306.2 246 69.1
Potri.008G042800 Populus trichocarpa HOM05D005690 ORTHO05D007075 4.6e-81 305.1 246 67.5
RcHm_v2.0_Chr1g0363981 Rosa chinensis HOM05D005690 ORTHO05D007075 6.0e-81 304.7 245 66.9
Duzib114G0556 Durio zibethinus HOM05D005690 ORTHO05D007075 7.8e-81 304.3 241 66.8
Atru.chr12.670 Acer truncatum HOM05D005690 ORTHO05D007075 1.0e-80 303.9 241 69.3
Atru.chr12.697 Acer truncatum HOM05D005690 ORTHO05D007075 3.0e-80 302.4 243 69.1
Eucgr.J01111 Eucalyptus grandis HOM05D005690 ORTHO05D007075 3.0e-80 302.4 240 67.9
FAN10G0816 Fragaria x ananassa HOM05D005690 ORTHO05D007075 3.0e-80 302.4 244 67.2
Cpa.g.sc53.43 Carica papaya HOM05D005690 ORTHO05D007075 3.9e-80 302.0 242 68.6
Lalb_Chr19g0129571 Lupinus albus HOM05D005690 ORTHO05D007075 3.9e-80 302.0 244 66.8
Nitab4.5_0000476g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 3.9e-80 302.0 245 67.3
Solyc05g056090.3 Solanum lycopersicum HOM05D005690 ORTHO05D007075 3.9e-80 302.0 242 66.5
Nitab4.5_0012288g0020 Nicotiana tabacum HOM05D005690 ORTHO05D007075 6.6e-80 301.2 243 65.4
PGSC0003DMG400023460 Solanum tuberosum HOM05D005690 ORTHO05D007075 8.6e-80 300.8 242 65.7
TAR636G2049 Trochodendron aralioides HOM05D005690 ORTHO05D007075 8.6e-80 300.8 248 64.5
ECA232G2854 Erigeron canadensis HOM05D005690 ORTHO05D007075 1.1e-79 300.4 246 66.7
Potri.010G219400 Populus trichocarpa HOM05D005690 ORTHO05D007075 1.1e-79 300.4 243 65.4
CAN.G694.84 Capsicum annuum HOM05D005690 ORTHO05D007075 1.5e-79 300.1 244 66.0
MELO3C002879.2 Cucumis melo HOM05D005690 ORTHO05D007075 1.5e-79 300.1 239 67.4
FvH4_7g20020 Fragaria vesca HOM05D005690 ORTHO05D007075 1.5e-79 300.1 244 68.0
FAN03G1698 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.5e-79 300.1 244 68.0
FAN06G0212 Fragaria x ananassa HOM05D005690 ORTHO05D007075 1.5e-79 300.1 244 68.0
Prupe.2G217200 Prunus persica HOM05D005690 ORTHO05D007075 1.5e-79 300.1 243 66.3
Sopen05g034500 Solanum pennellii HOM05D005690 ORTHO05D007075 1.5e-79 300.1 242 66.1
FAN01G0973 Fragaria x ananassa HOM05D005690 ORTHO05D007075 3.3e-79 298.9 244 66.8
PGR044G2452 Punica granatum HOM05D005690 ORTHO05D007075 3.3e-79 298.9 242 67.4
MD07G1177900 Malus domestica HOM05D005690 ORTHO05D007075 4.3e-79 298.5 242 65.7
Peaxi162Scf00108g00166 Petunia axillaris HOM05D005690 ORTHO05D007075 5.6e-79 298.1 243 65.8
TAR633G2147 Trochodendron aralioides HOM05D005690 ORTHO05D007075 5.6e-79 298.1 243 66.7
arahy.Tifrunner.gnm1.ann1.08HL34 Arachis hypogaea HOM05D005690 ORTHO05D007075 7.3e-79 297.7 233 68.2
CANSAT56G3535 Cannabis sativa HOM05D005690 ORTHO05D007075 7.3e-79 297.7 239 67.8
Haze_16926 Corylus avellana HOM05D005690 ORTHO05D007075 7.3e-79 297.7 238 66.4
arahy.Tifrunner.gnm1.ann1.8E9GH8 Arachis hypogaea HOM05D005690 ORTHO05D007075 9.5e-79 297.4 232 68.1
Migut.F01989 Erythranthe guttata HOM05D005690 ORTHO05D007075 9.5e-79 297.4 238 68.9
Sabra08G0029500 Salix brachista HOM05D005690 ORTHO05D007075 9.5e-79 297.4 189 77.8
CsaV3_5G025890 Cucumis sativus L. HOM05D005690 ORTHO05D007075 1.2e-78 297.0 239 66.1
unitig_0.g529 Utricularia gibba HOM05D005690 ORTHO05D007075 1.6e-78 296.6 180 79.4
AT2G35790 Arabidopsis thaliana HOM05D005690 ORTHO05D007075 2.1e-78 296.2 242 64.5
Cfa001602 Carpinus fangiana HOM05D005690 ORTHO05D007075 2.1e-78 296.2 244 66.0
Aa31LG9G7550 Aethionema arabicum HOM05D005690 ORTHO05D007075 4.7e-78 295.0 241 65.1
Hund19342 Selenicereus undatus HOM05D005690 ORTHO05D007075 4.7e-78 295.0 241 64.7
Lj2g0014971 Lotus japonicus HOM05D005690 ORTHO05D007075 6.2e-78 294.7 253 64.0
Carub.0004s1755 Capsella rubella HOM05D005690 ORTHO05D007075 1.1e-77 293.9 242 64.0
CARHR130040 Cardamine hirsuta HOM05D005690 ORTHO05D007075 1.1e-77 293.9 241 63.1
Nitab4.5_0000233g0230 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.4e-77 293.5 176 80.1
TWI38G1302 Tripterygium wilfordii HOM05D005690 ORTHO05D007075 1.4e-77 293.5 243 65.0
BcaB06g28872 Brassica carinata HOM05D005690 ORTHO05D007075 1.8e-77 293.1 245 64.9
Lsat_1_v5_gn_9_67140 Lactuca sativa HOM05D005690 ORTHO05D007075 2.3e-77 292.7 246 64.2
Peaxi162Scf01175g00023 Petunia axillaris HOM05D005690 ORTHO05D007075 3.1e-77 292.4 232 66.4
Sabra10G0169300 Salix brachista HOM05D005690 ORTHO05D007075 3.1e-77 292.4 184 76.6
TPR.G36634 Trifolium pratense HOM05D005690 ORTHO05D007075 3.1e-77 292.4 252 62.7
Potri.010G219000 Populus trichocarpa HOM05D005690 ORTHO05D007075 5.2e-77 291.6 184 76.1
BolC4t27955H Brassica oleracea HOM05D005690 ORTHO05D007075 6.8e-77 291.2 243 63.4
HanXRQChr09g0246501 Helianthus annuus HOM05D005690 ORTHO05D007075 6.8e-77 291.2 246 63.8
QL08p056659 Quercus lobata HOM05D005690 ORTHO05D007075 8.9e-77 290.8 241 65.1
AL4G31900 Arabidopsis lyrata HOM05D005690 ORTHO05D007075 1.2e-76 290.4 242 62.8
Nitab4.5_0009003g0010 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.2e-76 290.4 183 77.6
Hma1.2p1_2080F.1_g313490 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.5e-76 290.0 254 64.2
Sed0011214 Sechium edule HOM05D005690 ORTHO05D007075 2.0e-76 289.7 235 65.5
Sed0019941 Sechium edule HOM05D005690 ORTHO05D007075 2.0e-76 289.7 235 66.4
A04p27260 Brassica napus HOM05D005690 ORTHO05D007075 4.4e-76 288.5 249 61.8
SalBow4G1295 Salvia bowleyana HOM05D005690 ORTHO05D007075 5.8e-76 288.1 226 66.4
C04p64770 Brassica napus HOM05D005690 ORTHO05D007075 7.6e-76 287.7 249 61.8
BraA04t18224Z Brassica rapa HOM05D005690 ORTHO05D007075 7.6e-76 287.7 250 61.6
ATR1159G074 Amborella trichopoda HOM05D005690 ORTHO05D007075 9.9e-76 287.3 174 77.6
MBI05_g11579_MAGBIO Magnolia biondii HOM05D005690 ORTHO05D007075 1.7e-75 286.6 198 71.7
Ca_04676_v3 Cicer arietinum L. HOM05D005690 ORTHO05D007075 2.2e-75 286.2 177 78.0
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 2.9e-75 285.8 228 65.8
Thhalv10017166m.g Eutrema salsugineum HOM05D005690 ORTHO05D007075 8.4e-75 284.3 244 60.7
A03p19730 Brassica napus HOM05D005690 ORTHO05D007075 1.1e-74 283.9 246 61.4
Hma1.2p1_0453F.1_g156020 Hydrangea macrophylla HOM05D005690 ORTHO05D007075 1.1e-74 283.9 175 77.1
Zm00001eb064810 Zea mays HOM05D005690 ORTHO05D007075 2.4e-74 282.7 179 77.1
BcaC01g05707 Brassica carinata HOM05D005690 ORTHO05D007075 3.2e-74 282.3 242 62.0
C03p22980 Brassica napus HOM05D005690 ORTHO05D007075 3.2e-74 282.3 242 62.0
Medtr6g033405 Medicago truncatula HOM05D005690 ORTHO05D007075 3.2e-74 282.3 177 76.8
SalBow3G1299 Salvia bowleyana HOM05D005690 ORTHO05D007075 3.2e-74 282.3 240 62.5
HanXRQChr17g0563371 Helianthus annuus HOM05D005690 ORTHO05D007075 4.1e-74 282.0 178 77.0
Sp4g18050 Schrenkiella parvula HOM05D005690 ORTHO05D007075 5.4e-74 281.6 243 62.1
CDE04G0636 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 9.2e-74 280.8 177 78.0
PSO384G2564 Papaver somniferum HOM05D005690 ORTHO05D007075 9.2e-74 280.8 242 62.4
PSO339G2382 Papaver somniferum HOM05D005690 ORTHO05D007075 6.0e-73 278.1 182 74.2
vmacro04884 Vaccinium macrocarpon HOM05D005690 ORTHO05D007075 2.3e-72 276.2 202 69.8
HPP92_003607 Vanilla planifolia HOM05D005690 ORTHO05D007075 5.1e-72 275.0 176 72.7
Aqoxy6G02013 Aquilegia oxysepala HOM05D005690 ORTHO05D007075 1.5e-71 273.5 244 62.7
BcaB01g03881 Brassica carinata HOM05D005690 ORTHO05D007075 1.5e-71 273.5 249 61.0
Rhsim03G0123000 Rhododendron simsii HOM05D005690 ORTHO05D007075 5.6e-71 271.6 206 66.5
BcaC02g07668 Brassica carinata HOM05D005690 ORTHO05D007075 9.6e-71 270.8 175 76.6
AUR62027946 Chenopodium quinoa HOM05D005690 ORTHO05D007075 1.6e-70 270.0 243 59.7
EL10Ac2g03578 Beta vulgaris HOM05D005690 ORTHO05D007075 4.7e-70 268.5 177 74.0
AUR62020766 Chenopodium quinoa HOM05D005690 ORTHO05D007075 6.2e-70 268.1 243 59.7
ClCG09G020510 Citrullus lanatus HOM05D005690 ORTHO05D007075 6.8e-69 264.6 210 66.7
Os03g0853800 Oryza sativa ssp. japonica HOM05D005690 ORTHO05D007075 8.9e-69 264.2 165 78.8
Ah.16g108410 Amaranthus hybridus HOM05D005690 ORTHO05D007075 5.8e-68 261.5 177 73.4
CDE07G1130 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 2.9e-67 259.2 160 76.9
Eucgr.J01110 Eucalyptus grandis HOM05D005690 ORTHO05D007075 1.6e-65 253.4 233 57.9
SEGI_15078 Sequoiadendron giganteum HOM05D005690 ORTHO05D007075 2.1e-62 243.0 175 65.1
CSS0000246 Camellia sinensis var. sinensis HOM05D005690 ORTHO05D007075 3.0e-56 222.6 201 61.2
Peaxi162Scf00108g00173 Petunia axillaris HOM05D005690 ORTHO05D007075 2.4e-53 213.0 121 81.0
Sc06g0001780 Simmondsia chinensis HOM05D005690 ORTHO05D007075 6.9e-53 211.5 120 82.5
Lj8C97T4 Lonicera japonica HOM05D005690 ORTHO05D007075 8.4e-51 204.5 121 78.5
BcaB01g03882 Brassica carinata HOM05D005690 ORTHO05D007075 5.1e-48 195.3 111 81.1
CiPaw.01G275500 Carya illinoinensis HOM05D005690 ORTHO05D007075 8.7e-48 194.5 186 59.1
AagrBONN_evm.TU.Sc2ySwM_362.1612 Anthoceros agrestis HOM05D005690 ORTHO05D007075 2.4e-45 186.4 148 57.4
Psat1g099440 Pisum sativum HOM05D005690 ORTHO05D007075 5.8e-44 181.8 165 56.4
Mapoly0033s0041 Marchantia polymorpha HOM05D005690 ORTHO05D007075 1.9e-42 176.8 216 41.2
Nitab4.5_0003072g0050 Nicotiana tabacum HOM05D005690 ORTHO05D007075 1.9e-42 176.8 179 53.1
Pp3c10_15170 Physcomitrium patens HOM05D005690 ORTHO05D007075 2.7e-41 172.9 158 50.0
Mapoly0033s0042 Marchantia polymorpha HOM05D005690 ORTHO05D007075 6.3e-38 161.8 172 45.3
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 2.9e-35 152.9 181 44.2
SMO239G0063 Selaginella moellendorffii HOM05D005690 ORTHO05D007075 9.0e-29 131.3 146 39.7
Lalb_Chr01g0010161 Lupinus albus HOM05D005690 ORTHO05D007075 1.4e-26 124.0 68 80.9
Cre12.g540051 Chlamydomonas reinhardtii HOM05D005690 ORTHO05D007075 1.8e-16 90.5 152 30.3
Lalb_Chr01g0010151 Lupinus albus HOM05D005690 ORTHO05D007075 9.7e-15 84.7 113 52.2
CDE07G0610 Ceratophyllum demersum HOM05D005690 ORTHO05D007075 1.7e-14 84.0 123 43.9
MCO03G451 Micromonas commoda HOM05D005690 ORTHO05D007075 1.6e-12 77.4 135 34.8
HanXRQChr10g0292531 Helianthus annuus HOM05D005690 ORTHO05D007075 4.4e-07 59.3 67 53.7


User provided reference genes

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