Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 5.8e-112 407.5 199 100.0
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 1.4e-36 157.1 203 51.2
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 4.5e-32 142.1 203 47.8
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 4.2e-30 135.6 183 46.4
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 2.3e-28 129.8 203 38.9
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 1.2e-27 127.5 201 36.8
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 2.0e-27 126.7 204 38.2
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 5.7e-27 125.2 168 47.0
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 1.7e-26 123.6 196 38.3
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 2.2e-26 123.2 203 41.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.1e-25 120.9 197 36.0
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 1.4e-25 120.6 203 43.3
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 3.1e-25 119.4 203 37.9
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 5.4e-25 118.6 179 45.8
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 5.4e-25 118.6 179 45.8
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 5.4e-25 118.6 194 37.1
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 3.5e-24 115.9 203 37.4
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.3e-23 114.0 183 39.3
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 2.3e-23 113.2 217 35.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.3e-23 113.2 211 36.5
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 3.8e-23 112.5 193 39.9
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 5.0e-23 112.1 202 39.6
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.1e-22 110.9 219 34.7
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.1e-22 110.9 202 39.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 1.9e-22 110.2 219 34.7
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 2.5e-22 109.8 209 36.4
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 9.5e-22 107.8 199 33.7
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 1.2e-21 107.5 200 36.5
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 3.6e-21 105.9 200 37.5
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 3.6e-21 105.9 190 35.8
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 4.7e-21 105.5 199 35.2
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 4.7e-21 105.5 199 35.2
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 4.7e-21 105.5 209 34.0
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 6.1e-21 105.1 203 34.5
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.0e-20 104.4 189 37.6
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 8.9e-20 101.3 201 35.3
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.2e-19 100.9 181 38.7
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-19 100.9 205 34.6
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.5e-19 100.5 204 34.8
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 3.4e-19 99.4 181 37.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 3.4e-19 99.4 155 41.9
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 5.7e-19 98.6 209 33.5
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 5.7e-19 98.6 203 36.5
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.7e-19 98.6 188 38.8
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 5.7e-19 98.6 188 38.8
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 7.5e-19 98.2 216 35.6
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 7.5e-19 98.2 207 34.8
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 7.5e-19 98.2 212 36.3
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.8e-19 97.8 179 38.0
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.3e-18 97.4 219 37.0
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.3e-18 97.4 206 30.6
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 1.3e-18 97.4 197 37.1
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 1.3e-18 97.4 179 37.4
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-18 97.4 179 37.4
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.3e-18 97.4 179 38.0
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.3e-18 97.4 209 37.3
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 1.7e-18 97.1 206 34.5
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 2.2e-18 96.7 191 33.5
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 2.9e-18 96.3 192 33.9
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 2.9e-18 96.3 188 33.5
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.9e-18 96.3 212 35.8
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.9e-18 96.3 198 33.8
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 3.7e-18 95.9 176 36.4
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 3.7e-18 95.9 207 33.8
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 4.9e-18 95.5 208 31.7
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 6.4e-18 95.1 195 32.3
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 1.4e-17 94.0 174 35.6
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 2.4e-17 93.2 159 36.5
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 5.4e-17 92.0 176 38.6
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 1.2e-16 90.9 200 33.5
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.2e-16 90.9 183 33.9
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 1.6e-16 90.5 171 33.9
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 3.5e-16 89.4 218 31.2
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.9e-16 88.6 182 35.2
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.3e-15 87.4 225 31.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 2.3e-15 86.7 178 36.0
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.0e-15 86.3 196 31.6
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 5.0e-15 85.5 190 31.6
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 8.6e-15 84.7 184 33.2
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 1.1e-14 84.3 177 34.5
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 1.9e-14 83.6 177 32.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.3e-14 82.8 142 34.5
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 4.3e-14 82.4 175 30.3
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 4.3e-14 82.4 175 30.3
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 4.3e-14 82.4 197 29.9
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 5.6e-14 82.0 179 34.6
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 7.3e-14 81.6 144 34.7
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 9.5e-14 81.3 233 30.9
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 9.5e-14 81.3 194 33.5
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 1.2e-13 80.9 176 34.7
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 6.2e-13 78.6 108 42.6
Lsat_1_v5_gn_4_133360 Lactuca sativa HOM05D007182 ORTHO05D008919 1.1e-12 77.8 191 30.9
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 4.0e-12 75.9 176 31.8
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 6.8e-12 75.1 171 32.2
Lsat_1_v5_gn_1_25160 Lactuca sativa HOM05D007182 ORTHO05D008919 6.8e-12 75.1 199 31.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 8.9e-12 74.7 142 38.7
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.0e-11 73.6 160 30.0
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 5.8e-11 72.0 183 29.5
ECA247G3744 Erigeron canadensis HOM05D007182 ORTHO05D008919 9.2e-09 64.7 177 28.8
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 3.5e-08 62.8 123 35.0
Prupe.1G506300 Prunus persica HOM05D007182 ORTHO05D008919 7.8e-08 61.6 226 28.8
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 1.3e-07 60.8 161 31.7
AUR62004689 Chenopodium quinoa HOM05D007182 ORTHO05D008919 1.9e-06 57.0 152 30.9


User provided reference genes

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