Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 9.3e-59 229.9 112 100.0
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 2.2e-44 182.2 112 75.9
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 8.5e-44 180.3 112 73.2
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 7.2e-43 177.2 112 72.3
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 7.2e-43 177.2 117 73.5
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 1.2e-42 176.4 112 75.9
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 3.6e-42 174.9 112 72.3
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 6.1e-42 174.1 112 71.4
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 6.1e-42 174.1 112 72.3
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 1.3e-41 172.9 112 70.5
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 1.3e-41 172.9 113 71.7
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.8e-41 172.6 112 72.3
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 1.1e-40 169.9 119 68.9
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 4.3e-40 167.9 112 69.6
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 1.7e-39 166.0 119 68.9
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.7e-39 166.0 108 70.4
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 2.8e-39 165.2 112 68.8
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 2.8e-39 165.2 110 68.2
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 2.8e-39 165.2 118 66.9
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.8e-38 162.5 114 64.0
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.4e-38 162.2 113 69.9
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 3.1e-38 161.8 112 67.9
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 4.1e-38 161.4 115 67.0
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 4.1e-38 161.4 112 68.8
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 4.1e-38 161.4 112 65.2
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 6.9e-38 160.6 112 64.3
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 6.9e-38 160.6 115 66.1
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 6.9e-38 160.6 112 64.3
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 1.2e-37 159.8 114 67.5
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 2.0e-37 159.1 112 66.1
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 2.6e-37 158.7 112 64.3
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.6e-37 158.7 112 64.3
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 4.5e-37 157.9 112 64.3
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 5.9e-37 157.5 112 64.3
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 1.0e-36 156.8 112 64.3
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 1.3e-36 156.4 111 64.0
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.7e-36 156.0 112 63.4
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 2.2e-36 155.6 112 64.3
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 2.9e-36 155.2 112 62.5
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.9e-36 155.2 114 64.0
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 3.8e-36 154.8 112 61.6
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 3.8e-36 154.8 112 63.4
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 5.0e-36 154.5 114 64.9
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 8.5e-36 153.7 112 64.3
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.4e-35 152.9 112 62.5
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.4e-35 152.9 112 62.5
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.4e-35 152.9 116 62.1
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 1.9e-35 152.5 112 62.5
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.9e-35 152.5 112 62.5
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 3.2e-35 151.8 112 61.6
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.2e-35 151.4 111 60.4
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 5.5e-35 151.0 113 62.8
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 7.2e-35 150.6 115 64.3
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 1.6e-34 149.4 112 62.5
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.7e-34 148.7 113 61.9
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 3.6e-34 148.3 114 60.5
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 3.6e-34 148.3 102 66.7
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 7.9e-34 147.1 112 60.7
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 7.9e-34 147.1 112 58.0
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.4e-33 146.4 112 61.6
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.4e-33 146.4 112 61.6
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 1.4e-33 146.4 112 62.5
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.8e-33 146.0 112 61.6
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 1.8e-33 146.0 102 65.7
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 1.8e-33 146.0 112 59.8
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 2.3e-33 145.6 115 60.9
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.0e-33 145.2 105 62.9
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 5.1e-33 144.4 112 59.8
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 6.7e-33 144.1 112 60.7
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 2.6e-32 142.1 112 54.5
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 3.3e-32 141.7 112 60.7
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 9.7e-32 140.2 119 57.1
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 2.8e-31 138.7 112 60.7
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 6.3e-31 137.5 103 59.2
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 8.2e-31 137.1 112 58.9
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 8.2e-31 137.1 112 58.9
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 1.8e-30 136.0 112 56.2
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 1.5e-29 132.9 95 64.2
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 2.0e-29 132.5 120 53.3
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 7.7e-29 130.6 106 60.4
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 7.7e-29 130.6 114 57.9
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 2.9e-28 128.6 73 78.1
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 5.5e-27 124.4 113 56.6
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 8.0e-26 120.6 111 52.3
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 8.0e-26 120.6 104 51.9
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 6.3e-23 110.9 111 45.9
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 1.1e-19 100.1 120 43.3
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.0e-17 92.0 82 53.7
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 5.2e-17 91.3 119 39.5
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 7.7e-13 77.4 71 47.9
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 8.5e-12 73.9 112 42.0
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.2e-10 70.1 67 49.3
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.4e-09 66.6 35 77.1
Phvul.L001669 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 4.4e-08 61.6 42 66.7
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 7.5e-08 60.8 65 40.0
Aqoxy6G00222 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 2.2e-07 59.3 63 41.3


User provided reference genes

Program Settings