Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 5.0e-146 521.2 275 100.0
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 3.6e-120 435.3 237 96.6
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 3.8e-69 265.8 233 65.7
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 6.6e-66 255.0 230 63.5
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.4e-63 246.5 225 60.9
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 5.8e-62 241.9 213 63.8
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.7e-61 240.4 227 61.2
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.7e-53 213.8 232 55.2
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 7.9e-51 204.9 279 48.0
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.4e-47 194.1 231 53.7
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.5e-46 190.7 229 53.3
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 5.8e-46 188.7 210 53.8
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 5.8e-46 188.7 230 52.6
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 5.8e-46 188.7 229 52.4
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 7.6e-46 188.3 231 51.9
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 6.5e-45 185.3 231 51.5
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 2.5e-44 183.3 235 51.1
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.2e-43 181.0 244 47.1
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 2.1e-43 180.3 234 47.4
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 4.6e-43 179.1 226 47.8
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 7.9e-43 178.3 233 50.6
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 1.0e-42 177.9 226 50.0
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 3.0e-42 176.4 226 50.4
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 3.0e-42 176.4 231 46.3
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.0e-42 176.4 251 47.4
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.9e-42 176.0 222 46.8
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 8.7e-42 174.9 226 48.7
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 6.3e-40 168.7 249 46.2
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 1.1e-39 167.9 250 47.2
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 3.1e-39 166.4 232 44.8
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 6.9e-39 165.2 208 48.1
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 2.0e-38 163.7 235 45.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 1.0e-37 161.4 220 47.3
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 6.5e-37 158.7 215 47.4
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.1e-36 157.9 232 44.4
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 2.5e-36 156.8 237 43.9
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 4.2e-36 156.0 215 46.0
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 2.7e-35 153.3 228 46.5
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 6.1e-35 152.1 233 42.5
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 7.9e-35 151.8 219 43.4
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 7.9e-35 151.8 219 43.4
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.8e-34 150.6 279 40.1
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.0e-34 149.8 220 45.5
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 3.0e-34 149.8 220 44.1
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.9e-34 149.4 219 42.9
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 5.1e-34 149.1 228 45.6
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 5.1e-34 149.1 232 45.7
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 6.7e-34 148.7 230 43.5
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 1.1e-33 147.9 213 44.6
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.1e-33 147.9 155 50.3
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.2e-32 143.7 236 40.3
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.2e-32 143.7 215 44.2
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 2.8e-32 143.3 229 45.4
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 1.1e-31 141.4 232 43.1
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.1e-31 141.4 227 41.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 1.4e-31 141.0 241 41.5
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 3.1e-31 139.8 211 44.5
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 5.3e-31 139.0 235 40.0
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 9.0e-31 138.3 218 43.6
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 9.0e-31 138.3 227 41.0
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.2e-30 137.9 227 44.9
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 7.7e-30 135.2 236 41.9
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 7.7e-30 135.2 184 43.5
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.0e-29 134.8 235 41.3
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 2.9e-29 133.3 209 44.5
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 8.5e-29 131.7 207 44.4
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.4e-28 131.0 200 42.0
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.5e-28 130.2 226 41.2
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 5.5e-28 129.0 205 45.4
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 5.5e-28 129.0 205 43.9
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.2e-27 127.9 221 42.1
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 2.1e-27 127.1 236 39.8
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 2.7e-27 126.7 219 42.0
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 2.7e-27 126.7 229 37.6
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 3.6e-27 126.3 229 38.4
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 6.1e-27 125.6 185 44.9
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 7.9e-27 125.2 236 37.7
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 3.0e-26 123.2 182 46.2
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 3.0e-26 123.2 223 39.5
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 5.1e-26 122.5 227 40.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 3.3e-25 119.8 233 38.6
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 9.7e-25 118.2 162 50.6
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 1.7e-24 117.5 228 37.7
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 1.7e-24 117.5 272 35.7
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 2.2e-24 117.1 224 37.9
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 4.8e-24 115.9 231 38.1
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.8e-23 114.0 205 38.5
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 2.4e-23 113.6 209 38.8
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 5.3e-23 112.5 199 40.7
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 6.9e-23 112.1 199 40.7
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 6.9e-23 112.1 199 41.2
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 2.0e-22 110.5 199 40.7
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 5.9e-22 109.0 200 40.5
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 7.7e-22 108.6 224 36.6
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 7.7e-22 108.6 242 35.1
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 8.5e-21 105.1 147 42.2
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-20 104.8 147 42.2
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 2.5e-20 103.6 203 40.4
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 9.4e-20 101.7 252 36.1
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 1.6e-19 100.9 184 40.2
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 3.6e-19 99.8 227 37.4
VMungo0251G3272 Vigna mungo HOM05D005900 ORTHO05D007306 6.1e-19 99.0 223 39.0
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 8.8e-18 95.1 91 50.5
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 8.8e-18 95.1 222 38.7
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 1.1e-17 94.7 229 35.8
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 1.5e-17 94.4 229 34.9
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 2.0e-17 94.0 206 36.4
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 2.6e-17 93.6 76 55.3
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 3.3e-17 93.2 228 36.8
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 2.8e-16 90.1 220 36.4
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 3.7e-16 89.7 222 35.1
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 4.8e-16 89.4 222 33.8
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 4.1e-15 86.3 218 31.2
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 4.5e-14 82.8 233 35.6
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 1.3e-13 81.3 178 32.0
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 8.5e-13 78.6 229 33.2
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.5e-12 77.8 157 33.8
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 1.6e-11 74.3 168 38.1
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.7e-11 72.8 168 38.1
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 4.0e-10 69.7 61 57.4
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 2.6e-09 67.0 183 30.6
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 5.7e-09 65.9 249 32.9
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 7.5e-09 65.5 151 37.1
Nn3g20876 Nelumbo nucifera HOM05D005900 ORTHO05D007306 3.7e-08 63.2 69 53.6
CARHR278660 Cardamine hirsuta HOM05D005900 ORTHO05D007306 9.1e-07 58.5 222 28.4


User provided reference genes

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