Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11981 Striga asiatica HOM05D006174 ORTHO05D007987 2.7e-106 388.7 190 100.0
SGA_v2.0_scaffold75G24945 Striga asiatica HOM05D006174 ORTHO05D007987 1.2e-50 203.8 208 61.5
Migut.N03269 Erythranthe guttata HOM05D006174 ORTHO05D007987 4.6e-42 175.3 116 71.6
Oeu001538.1 Olea europaea HOM05D006174 ORTHO05D007987 6.7e-41 171.4 112 70.5
SalBow2G2495 Salvia bowleyana HOM05D006174 ORTHO05D007987 4.3e-40 168.7 184 52.7
Aqoxy3G03207 Aquilegia oxysepala HOM05D006174 ORTHO05D007987 3.8e-36 155.6 115 60.0
PGR044G0496 Punica granatum HOM05D006174 ORTHO05D007987 4.9e-36 155.2 112 62.5
Lj7C346T1 Lonicera japonica HOM05D006174 ORTHO05D007987 6.5e-36 154.8 114 64.0
Lsat_1_v5_gn_4_117540 Lactuca sativa HOM05D006174 ORTHO05D007987 1.4e-35 153.7 114 61.4
CANSAT56G3042 Cannabis sativa HOM05D006174 ORTHO05D007987 1.9e-35 153.3 114 61.4
FAN24G3105 Fragaria x ananassa HOM05D006174 ORTHO05D007987 2.5e-35 152.9 166 50.0
ClCG11G015920 Citrullus lanatus HOM05D006174 ORTHO05D007987 3.2e-35 152.5 114 64.0
QL09p033206 Quercus lobata HOM05D006174 ORTHO05D007987 3.2e-35 152.5 114 59.6
FAN20G1065 Fragaria x ananassa HOM05D006174 ORTHO05D007987 4.2e-35 152.1 166 50.0
FvH4_2g27550 Fragaria vesca HOM05D006174 ORTHO05D007987 5.5e-35 151.8 166 49.4
ECA232G2008 Erigeron canadensis HOM05D006174 ORTHO05D007987 9.3e-35 151.0 114 62.3
PSO832G2909 Papaver somniferum HOM05D006174 ORTHO05D007987 9.3e-35 151.0 114 60.5
FAN15G2863 Fragaria x ananassa HOM05D006174 ORTHO05D007987 1.6e-34 150.2 166 49.4
MELO3C025482.2 Cucumis melo HOM05D006174 ORTHO05D007987 2.1e-34 149.8 114 62.3
Thecc.08G130300 Theobroma cacao HOM05D006174 ORTHO05D007987 2.1e-34 149.8 114 61.4
Nn2g10369 Nelumbo nucifera HOM05D006174 ORTHO05D007987 2.7e-34 149.4 113 59.3
CsaV3_5G026160 Cucumis sativus L. HOM05D006174 ORTHO05D007987 3.5e-34 149.1 114 61.4
Nn8g40873 Nelumbo nucifera HOM05D006174 ORTHO05D007987 4.6e-34 148.7 114 59.6
Dinv14652 Davidia involucrata HOM05D006174 ORTHO05D007987 6.0e-34 148.3 114 57.0
PGSC0003DMG400006019 Solanum tuberosum HOM05D006174 ORTHO05D007987 6.0e-34 148.3 114 63.2
Sed0011313 Sechium edule HOM05D006174 ORTHO05D007987 7.9e-34 147.9 114 61.4
Haze_17519 Corylus avellana HOM05D006174 ORTHO05D007987 1.0e-33 147.5 114 57.0
Lalb_Chr17g0343621 Lupinus albus HOM05D006174 ORTHO05D007987 1.0e-33 147.5 114 60.5
CAN.G1352.3 Capsicum annuum HOM05D006174 ORTHO05D007987 1.8e-33 146.7 114 60.5
Eucgr.F04334 Eucalyptus grandis HOM05D006174 ORTHO05D007987 1.8e-33 146.7 111 56.8
FAN27G1425 Fragaria x ananassa HOM05D006174 ORTHO05D007987 3.0e-33 146.0 186 45.7
Sopen08g010060 Solanum pennellii HOM05D006174 ORTHO05D007987 3.0e-33 146.0 114 62.3
Cfa018561 Carpinus fangiana HOM05D006174 ORTHO05D007987 5.1e-33 145.2 114 57.0
HanXRQChr11g0326181 Helianthus annuus HOM05D006174 ORTHO05D007987 6.7e-33 144.8 114 60.5
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 6.7e-33 144.8 114 57.0
Solyc08g029150.3 Solanum lycopersicum HOM05D006174 ORTHO05D007987 6.7e-33 144.8 114 61.4
Atru.chr13.1536 Acer truncatum HOM05D006174 ORTHO05D007987 8.7e-33 144.4 114 60.5
CSS0047085 Camellia sinensis var. sinensis HOM05D006174 ORTHO05D007987 1.1e-32 144.1 114 55.3
Actinidia21299 Actinidia chinensis HOM05D006174 ORTHO05D007987 1.5e-32 143.7 114 57.0
MD00G1030400 Malus domestica HOM05D006174 ORTHO05D007987 1.5e-32 143.7 114 58.8
Manes.18G080300 Manihot esculenta HOM05D006174 ORTHO05D007987 1.5e-32 143.7 128 56.2
arahy.Tifrunner.gnm1.ann1.9UW3CC Arachis hypogaea HOM05D006174 ORTHO05D007987 1.9e-32 143.3 113 61.9
arahy.Tifrunner.gnm1.ann1.I3T0B4 Arachis hypogaea HOM05D006174 ORTHO05D007987 1.9e-32 143.3 113 61.9
Cpa.g.sc64.130 Carica papaya HOM05D006174 ORTHO05D007987 1.9e-32 143.3 114 57.0
Potri.002G080300 Populus trichocarpa HOM05D006174 ORTHO05D007987 1.9e-32 143.3 117 54.7
COL.COLO4_03953 Corchorus olitorius HOM05D006174 ORTHO05D007987 2.5e-32 142.9 107 61.7
vmacro17639 Vaccinium macrocarpon HOM05D006174 ORTHO05D007987 2.5e-32 142.9 114 56.1
Peaxi162Scf00310g00046 Petunia axillaris HOM05D006174 ORTHO05D007987 9.6e-32 141.0 114 58.8
Duzib093G0805 Durio zibethinus HOM05D006174 ORTHO05D007987 1.3e-31 140.6 114 58.8
Gohir.A06G046700 Gossypium hirsutum HOM05D006174 ORTHO05D007987 1.3e-31 140.6 114 58.8
TAR336G0003 Trochodendron aralioides HOM05D006174 ORTHO05D007987 1.3e-31 140.6 114 56.1
CiPaw.15G033800 Carya illinoinensis HOM05D006174 ORTHO05D007987 2.1e-31 139.8 114 57.0
Gorai.010G052600 Gossypium raimondii HOM05D006174 ORTHO05D007987 2.8e-31 139.4 114 57.9
Prupe.1G492400 Prunus persica HOM05D006174 ORTHO05D007987 2.8e-31 139.4 113 55.8
Gohir.D06G047100 Gossypium hirsutum HOM05D006174 ORTHO05D007987 3.7e-31 139.0 114 58.8
Carub.0002s2430 Capsella rubella HOM05D006174 ORTHO05D007987 6.3e-31 138.3 115 52.2
Nitab4.5_0000111g0120 Nicotiana tabacum HOM05D006174 ORTHO05D007987 1.4e-30 137.1 114 55.3
Sc14g0003020 Simmondsia chinensis HOM05D006174 ORTHO05D007987 1.4e-30 137.1 131 51.1
TWI34G0515 Tripterygium wilfordii HOM05D006174 ORTHO05D007987 1.4e-30 137.1 113 57.5
Aa31LG4G7430 Aethionema arabicum HOM05D006174 ORTHO05D007987 4.1e-30 135.6 115 49.6
Thhalv10019853m.g Eutrema salsugineum HOM05D006174 ORTHO05D007987 4.1e-30 135.6 115 51.3
AT1G77405 Arabidopsis thaliana HOM05D006174 ORTHO05D007987 5.3e-30 135.2 115 51.3
CARHR070890 Cardamine hirsuta HOM05D006174 ORTHO05D007987 5.3e-30 135.2 115 51.3
Ciclev10003743m.g Citrus clementina HOM05D006174 ORTHO05D007987 5.3e-30 135.2 114 55.3
Sabra05G0137100 Salix brachista HOM05D006174 ORTHO05D007987 5.3e-30 135.2 117 53.0
C01p23850 Brassica napus HOM05D006174 ORTHO05D007987 6.9e-30 134.8 115 52.2
Sp5g32560 Schrenkiella parvula HOM05D006174 ORTHO05D007987 6.9e-30 134.8 115 50.4
AL2G37610 Arabidopsis lyrata HOM05D006174 ORTHO05D007987 9.0e-30 134.4 115 52.2
BcaC09g50568 Brassica carinata HOM05D006174 ORTHO05D007987 9.0e-30 134.4 115 52.2
BolC1t02330H Brassica oleracea HOM05D006174 ORTHO05D007987 9.0e-30 134.4 115 52.2
A01p18890 Brassica napus HOM05D006174 ORTHO05D007987 1.2e-29 134.0 115 51.3
BraA01t01830Z Brassica rapa HOM05D006174 ORTHO05D007987 1.2e-29 134.0 115 51.3
RcHm_v2.0_Chr4g0420811 Rosa chinensis HOM05D006174 ORTHO05D007987 1.5e-29 133.7 175 44.0
A01p18900 Brassica napus HOM05D006174 ORTHO05D007987 2.0e-29 133.3 115 51.3
BraA01t01831Z Brassica rapa HOM05D006174 ORTHO05D007987 2.0e-29 133.3 115 51.3
DCAR_014377 Daucus carota HOM05D006174 ORTHO05D007987 3.4e-29 132.5 113 55.8
Nitab4.5_0005499g0020 Nicotiana tabacum HOM05D006174 ORTHO05D007987 3.4e-29 132.5 114 53.5
ATR0751G052 Amborella trichopoda HOM05D006174 ORTHO05D007987 4.5e-29 132.1 112 54.5
BcaB05g25044 Brassica carinata HOM05D006174 ORTHO05D007987 4.5e-29 132.1 116 49.1
Ah.12g055480 Amaranthus hybridus HOM05D006174 ORTHO05D007987 2.2e-28 129.8 128 51.6
EL10Ac5g12247 Beta vulgaris HOM05D006174 ORTHO05D007987 2.2e-28 129.8 133 49.6
BcaC03g15734 Brassica carinata HOM05D006174 ORTHO05D007987 2.2e-28 129.8 115 51.3
THA.LOC104800212 Tarenaya hassleriana HOM05D006174 ORTHO05D007987 3.8e-28 129.0 116 50.0
Lj1g0022003 Lotus japonicus HOM05D006174 ORTHO05D007987 5.0e-28 128.6 116 53.4
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 8.4e-28 127.9 113 51.3
AUR62041512 Chenopodium quinoa HOM05D006174 ORTHO05D007987 1.1e-27 127.5 113 53.1
Nn7g36521 Nelumbo nucifera HOM05D006174 ORTHO05D007987 1.1e-27 127.5 113 55.8
AUR62031996 Chenopodium quinoa HOM05D006174 ORTHO05D007987 1.9e-27 126.7 129 49.6
arahy.Tifrunner.gnm1.ann1.DV4E2P Arachis hypogaea HOM05D006174 ORTHO05D007987 7.2e-27 124.8 94 62.8
GSVIVG01008474001 Vitis vinifera HOM05D006174 ORTHO05D007987 6.7e-25 118.2 114 49.1
Phvul.001G090600 Phaseolus vulgaris HOM05D006174 ORTHO05D007987 2.5e-24 116.3 165 41.8
Glyma.19G099200 Glycine max HOM05D006174 ORTHO05D007987 3.3e-24 115.9 113 54.0
VMungo1080G1789 Vigna mungo HOM05D006174 ORTHO05D007987 5.7e-24 115.2 112 50.9
HPP92_023560 Vanilla planifolia HOM05D006174 ORTHO05D007987 1.7e-20 103.6 115 50.4
SEGI_34053 Sequoiadendron giganteum HOM05D006174 ORTHO05D007987 6.5e-20 101.7 128 40.6
Rhsim08G0141900 Rhododendron simsii HOM05D006174 ORTHO05D007987 7.2e-19 98.2 74 59.5
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 9.4e-19 97.8 113 43.4
Psat1g032920 Pisum sativum HOM05D006174 ORTHO05D007987 3.6e-18 95.9 92 50.0
Medtr3g108060 Medicago truncatula HOM05D006174 ORTHO05D007987 7.9e-18 94.7 92 48.9
TPR.G8620 Trifolium pratense HOM05D006174 ORTHO05D007987 1.0e-17 94.4 113 43.4
SHI21567 Sapria himalayana HOM05D006174 ORTHO05D007987 2.5e-16 89.7 87 44.8
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 2.2e-15 86.7 70 51.4
Ca_25317_v3 Cicer arietinum L. HOM05D006174 ORTHO05D007987 2.0e-13 80.1 125 36.0
SGA_v2.0_scaffold154G37185 Striga asiatica HOM05D006174 ORTHO05D007987 3.9e-09 65.9 41 80.5
QL09p033332 Quercus lobata HOM05D006174 ORTHO05D007987 5.1e-09 65.5 53 56.6
Cc10_g12420 Coffea canephora HOM05D006174 ORTHO05D007987 5.7e-08 62.0 52 53.8
Actinidia28258 Actinidia chinensis HOM05D006174 ORTHO05D007987 1.3e-07 60.8 51 52.9
PGSC0003DMG400014838 Solanum tuberosum HOM05D006174 ORTHO05D007987 2.8e-07 59.7 53 56.6
PGSC0003DMG400029178 Solanum tuberosum HOM05D006174 ORTHO05D007987 2.8e-07 59.7 53 56.6


User provided reference genes

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