Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 9.5e-57 223.4 122 100.0
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 1.6e-19 99.8 69 81.2
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 2.8e-16 89.0 52 94.2
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 1.8e-15 86.3 52 90.4
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 2.4e-15 85.9 55 87.3
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 3.1e-15 85.5 52 90.4
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 2.0e-14 82.8 52 88.5
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.6e-14 82.4 52 84.6
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 4.5e-14 81.6 52 86.5
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 5.8e-14 81.3 52 84.6
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 5.8e-14 81.3 52 86.5
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 7.6e-14 80.9 53 83.0
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 9.9e-14 80.5 52 84.6
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 9.9e-14 80.5 52 84.6
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 1.3e-13 80.1 52 84.6
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 1.3e-13 80.1 52 82.7
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 1.7e-13 79.7 52 82.7
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.7e-13 79.7 52 82.7
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.7e-13 79.7 52 84.6
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 2.9e-13 79.0 52 82.7
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 2.9e-13 79.0 52 82.7
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 3.8e-13 78.6 52 82.7
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 3.8e-13 78.6 53 81.1
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 4.9e-13 78.2 52 84.6
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 6.4e-13 77.8 56 75.0
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 6.4e-13 77.8 52 82.7
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 6.4e-13 77.8 52 82.7
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 6.4e-13 77.8 52 82.7
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 1.1e-12 77.0 52 80.8
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.4e-12 76.6 52 80.8
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 1.4e-12 76.6 52 80.8
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 1.9e-12 76.3 52 78.8
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 80.8
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 80.8
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 80.8
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 78.8
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 78.8
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.4e-12 75.9 52 78.8
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 3.2e-12 75.5 59 67.8
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 3.2e-12 75.5 59 67.8
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.2e-12 75.5 52 80.8
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 4.2e-12 75.1 52 80.8
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 5.4e-12 74.7 52 78.8
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 5.4e-12 74.7 52 78.8
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 7.1e-12 74.3 53 79.2
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 7.1e-12 74.3 52 78.8
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 7.1e-12 74.3 52 78.8
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 7.1e-12 74.3 52 80.8
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 7.1e-12 74.3 52 78.8
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 9.3e-12 73.9 52 76.9
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 9.3e-12 73.9 52 78.8
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 9.3e-12 73.9 52 80.8
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 1.2e-11 73.6 54 75.9
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-11 73.6 52 75.0
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.2e-11 73.6 59 69.5
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 1.2e-11 73.6 52 78.8
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.2e-11 73.6 52 78.8
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 78.8
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 1.6e-11 73.2 65 64.6
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 78.8
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 78.8
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 76.9
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 76.9
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 1.6e-11 73.2 52 78.8
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 2.1e-11 72.8 52 78.8
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.1e-11 72.8 52 76.9
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 2.1e-11 72.8 52 76.9
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.7e-11 72.4 73 58.9
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 2.7e-11 72.4 52 78.8
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 2.7e-11 72.4 52 75.0
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.7e-11 72.4 52 76.9
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.0e-11 71.2 52 76.9
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 7.9e-11 70.9 52 76.9
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 7.9e-11 70.9 52 75.0
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 7.9e-11 70.9 52 76.9
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 7.9e-11 70.9 52 76.9
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 1.0e-10 70.5 45 84.4
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 1.8e-10 69.7 52 76.9
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 1.8e-10 69.7 56 71.4
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 3.0e-10 68.9 54 63.0
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 3.0e-10 68.9 52 75.0
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 1.9e-09 66.2 52 73.1
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 1.9e-09 66.2 49 71.4
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 2.5e-09 65.9 52 73.1
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 3.3e-09 65.5 52 71.2
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 3.3e-09 65.5 52 71.2
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 3.3e-09 65.5 52 71.2
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 4.3e-09 65.1 52 71.2
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 4.3e-09 65.1 52 71.2
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 4.3e-09 65.1 52 71.2
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 5.6e-09 64.7 52 71.2
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 5.6e-09 64.7 52 71.2
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 5.6e-09 64.7 53 60.4
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 7.4e-09 64.3 58 63.8
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 9.6e-09 63.9 80 51.2
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 9.6e-09 63.9 52 69.2
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 9.6e-09 63.9 51 72.5
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 9.6e-09 63.9 54 74.1
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 9.6e-09 63.9 51 72.5
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 9.6e-09 63.9 52 69.2
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 9.6e-09 63.9 54 74.1
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.3e-08 63.5 52 69.2
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.6e-08 63.2 50 72.0
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 2.1e-08 62.8 52 71.2
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 2.8e-08 62.4 50 70.0
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 2.8e-08 62.4 48 75.0
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 3.7e-08 62.0 53 66.0
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 3.7e-08 62.0 52 67.3
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 4.8e-08 61.6 52 65.4
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 8.1e-08 60.8 48 68.8
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 8.1e-08 60.8 47 68.1
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.2e-06 57.0 48 66.7
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 2.6e-06 55.8 51 62.7


User provided reference genes

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