Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11869 Striga asiatica HOM05D005492 ORTHO05D006911 5.7e-103 377.5 176 100.0
MSTRG.24417 Avicennia marina HOM05D005492 ORTHO05D006911 2.9e-99 365.2 176 94.3
PGR083G0175 Punica granatum HOM05D005492 ORTHO05D006911 1.1e-98 363.2 173 94.2
Oeu026363.1 Olea europaea HOM05D005492 ORTHO05D006911 4.2e-98 361.3 174 93.7
MD08G1209200 Malus domestica HOM05D005492 ORTHO05D006911 5.5e-98 360.9 174 93.1
Gohir.A05G264075 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.6e-97 359.4 174 93.1
Gohir.D05G266500 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.6e-97 359.4 174 93.1
Gorai.009G278400 Gossypium raimondii HOM05D005492 ORTHO05D006911 1.6e-97 359.4 174 93.1
C07p17680 Brassica napus HOM05D005492 ORTHO05D006911 2.7e-97 358.6 174 93.1
Carub.0001s2610 Capsella rubella HOM05D005492 ORTHO05D006911 2.7e-97 358.6 174 92.0
CARHR027130 Cardamine hirsuta HOM05D005492 ORTHO05D006911 2.7e-97 358.6 174 92.0
CiPaw.15G151700 Carya illinoinensis HOM05D005492 ORTHO05D006911 2.7e-97 358.6 173 92.5
Thecc.08G078100 Theobroma cacao HOM05D005492 ORTHO05D006911 2.7e-97 358.6 174 92.5
MD15G1393200 Malus domestica HOM05D005492 ORTHO05D006911 3.6e-97 358.2 174 92.0
Oeu002945.1 Olea europaea HOM05D005492 ORTHO05D006911 3.6e-97 358.2 174 93.1
RcHm_v2.0_Chr7g0232851 Rosa chinensis HOM05D005492 ORTHO05D006911 3.6e-97 358.2 174 92.5
Migut.N02829 Erythranthe guttata HOM05D005492 ORTHO05D006911 4.6e-97 357.8 176 92.0
Migut.O00437 Erythranthe guttata HOM05D005492 ORTHO05D006911 4.6e-97 357.8 176 92.0
Prupe.1G541400 Prunus persica HOM05D005492 ORTHO05D006911 4.6e-97 357.8 174 92.5
A07p11710 Brassica napus HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 92.5
A08p26210 Brassica napus HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 92.5
BolC7t42275H Brassica oleracea HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 92.5
BraA07t28956Z Brassica rapa HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 92.5
BraA08t34572Z Brassica rapa HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 92.5
Dinv44895 Davidia involucrata HOM05D005492 ORTHO05D006911 6.1e-97 357.5 174 91.4
BcaC01g06944 Brassica carinata HOM05D005492 ORTHO05D006911 7.9e-97 357.1 174 92.0
BolC3t19680H Brassica oleracea HOM05D005492 ORTHO05D006911 7.9e-97 357.1 174 92.5
CANSAT35G2015 Cannabis sativa HOM05D005492 ORTHO05D006911 1.0e-96 356.7 174 91.4
Cc10_g08150 Coffea canephora HOM05D005492 ORTHO05D006911 1.0e-96 356.7 173 94.2
Thhalv10008910m.g Eutrema salsugineum HOM05D005492 ORTHO05D006911 1.0e-96 356.7 174 92.0
Solyc04g076890.4 Solanum lycopersicum HOM05D005492 ORTHO05D006911 1.0e-96 356.7 174 92.0
Sopen04g030660 Solanum pennellii HOM05D005492 ORTHO05D006911 1.0e-96 356.7 174 92.0
PGSC0003DMG400006380 Solanum tuberosum HOM05D005492 ORTHO05D006911 1.0e-96 356.7 174 92.0
Ah.00g000130 Amaranthus hybridus HOM05D005492 ORTHO05D006911 1.4e-96 356.3 174 92.0
Duzib041G0144 Durio zibethinus HOM05D005492 ORTHO05D006911 1.4e-96 356.3 174 92.5
Eucgr.F00462 Eucalyptus grandis HOM05D005492 ORTHO05D006911 1.4e-96 356.3 174 92.5
Gohir.D06G028400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.4e-96 356.3 174 92.0
TWI12G1341 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 1.4e-96 356.3 174 91.4
BcaC01g01601 Brassica carinata HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 92.0
C03p74220 Brassica napus HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 92.0
Ciclev10002666m.g Citrus clementina HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 92.0
Gohir.A06G029400 Gossypium hirsutum HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 92.0
Lsat_1_v5_gn_9_81101 Lactuca sativa HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 93.1
Sabra02G0084500 Salix brachista HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 91.4
Sp1g23790 Schrenkiella parvula HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 91.4
vmacro21373 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 1.8e-96 355.9 174 92.5
COL.COLO4_35339 Corchorus olitorius HOM05D005492 ORTHO05D006911 2.3e-96 355.5 174 92.0
Glyma.06G091400 Glycine max HOM05D005492 ORTHO05D006911 2.3e-96 355.5 176 90.9
Aa31LG7G10120 Aethionema arabicum HOM05D005492 ORTHO05D006911 3.0e-96 355.1 173 93.1
AL1G40960 Arabidopsis lyrata HOM05D005492 ORTHO05D006911 3.0e-96 355.1 174 90.8
AT1G27530 Arabidopsis thaliana HOM05D005492 ORTHO05D006911 3.0e-96 355.1 174 90.8
arahy.Tifrunner.gnm1.ann1.7IN1UY Arachis hypogaea HOM05D005492 ORTHO05D006911 3.0e-96 355.1 174 91.4
arahy.Tifrunner.gnm1.ann1.EMS59G Arachis hypogaea HOM05D005492 ORTHO05D006911 3.0e-96 355.1 174 91.4
BcaC05g26754 Brassica carinata HOM05D005492 ORTHO05D006911 3.0e-96 355.1 174 92.0
Lj4A81T75 Lonicera japonica HOM05D005492 ORTHO05D006911 3.0e-96 355.1 173 92.5
Cfa020694 Carpinus fangiana HOM05D005492 ORTHO05D006911 3.9e-96 354.8 173 92.5
Haze_18999 Corylus avellana HOM05D005492 ORTHO05D006911 3.9e-96 354.8 173 92.5
FAN08G0693 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 91.4
FAN18G0360 Fragaria x ananassa HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 91.4
Lj1g0026792 Lotus japonicus HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 91.4
Potri.002G107600 Populus trichocarpa HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 90.8
THA.LOC104800327 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 3.9e-96 354.8 174 92.0
BcaC06g35300 Brassica carinata HOM05D005492 ORTHO05D006911 5.1e-96 354.4 174 92.0
AUR62035696 Chenopodium quinoa HOM05D005492 ORTHO05D006911 5.1e-96 354.4 177 92.7
Duzib041G0066 Durio zibethinus HOM05D005492 ORTHO05D006911 5.1e-96 354.4 174 92.0
Hma1.2p1_1548F.1_g290020 Hydrangea macrophylla HOM05D005492 ORTHO05D006911 5.1e-96 354.4 173 91.3
Actinidia10257 Actinidia chinensis HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 91.4
CAN.G723.31 Capsicum annuum HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 90.2
FAN04G2818 Fragaria x ananassa HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 90.8
Gorai.010G031300 Gossypium raimondii HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 91.4
HanXRQChr01g0001771 Helianthus annuus HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 92.5
Nitab4.5_0000377g0170 Nicotiana tabacum HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 92.0
Nitab4.5_0005557g0040 Nicotiana tabacum HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 92.0
vmacro04619 Vaccinium macrocarpon HOM05D005492 ORTHO05D006911 6.7e-96 354.0 174 89.7
AUR62035408 Chenopodium quinoa HOM05D005492 ORTHO05D006911 8.8e-96 353.6 172 93.0
BcaB03g13980 Brassica carinata HOM05D005492 ORTHO05D006911 1.1e-95 353.2 174 91.4
Manes.18G054601 Manihot esculenta HOM05D005492 ORTHO05D006911 1.1e-95 353.2 174 90.8
VMungo1309G2191 Vigna mungo HOM05D005492 ORTHO05D006911 1.1e-95 353.2 174 90.8
CsaV3_3G048290 Cucumis sativus L. HOM05D005492 ORTHO05D006911 1.5e-95 352.8 174 89.7
QL12p040192 Quercus lobata HOM05D005492 ORTHO05D006911 2.0e-95 352.4 173 90.8
Sc02g0008380 Simmondsia chinensis HOM05D005492 ORTHO05D006911 2.0e-95 352.4 174 91.4
TWI32G1091 Tripterygium wilfordii HOM05D005492 ORTHO05D006911 2.0e-95 352.4 174 90.2
TAR628G0115 Trochodendron aralioides HOM05D005492 ORTHO05D006911 2.6e-95 352.1 174 89.7
MSTRG.22188 Avicennia marina HOM05D005492 ORTHO05D006911 3.3e-95 351.7 176 93.2
Dinv22020 Davidia involucrata HOM05D005492 ORTHO05D006911 3.3e-95 351.7 174 90.2
GSVIVG01009242001 Vitis vinifera HOM05D005492 ORTHO05D006911 3.3e-95 351.7 174 90.8
Duzib116G0911 Durio zibethinus HOM05D005492 ORTHO05D006911 4.4e-95 351.3 176 90.9
Actinidia19266 Actinidia chinensis HOM05D005492 ORTHO05D006911 5.7e-95 350.9 174 89.7
Cpa.g.sc160.3 Carica papaya HOM05D005492 ORTHO05D006911 7.4e-95 350.5 174 90.2
Glyma.04G089600 Glycine max HOM05D005492 ORTHO05D006911 7.4e-95 350.5 176 89.8
Medtr3g111110 Medicago truncatula HOM05D005492 ORTHO05D006911 7.4e-95 350.5 174 89.7
MBI16_g26726_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 9.7e-95 350.1 174 89.7
PSO210G2227 Papaver somniferum HOM05D005492 ORTHO05D006911 9.7e-95 350.1 174 90.2
PSO761G0095 Papaver somniferum HOM05D005492 ORTHO05D006911 9.7e-95 350.1 174 90.2
unitig_8.g4867 Utricularia gibba HOM05D002193 ORTHO05D002631 9.7e-95 350.1 169 91.7
CSS0048416 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 1.3e-94 349.7 174 89.7
Psat5g017920 Pisum sativum HOM05D005492 ORTHO05D006911 1.3e-94 349.7 174 89.7
Sed0023469 Sechium edule HOM05D005492 ORTHO05D006911 1.3e-94 349.7 174 90.2
Aqoxy5G01947 Aquilegia oxysepala HOM05D005492 ORTHO05D006911 2.8e-94 348.6 174 89.7
Lalb_Chr08g0242711 Lupinus albus HOM05D005492 ORTHO05D006911 3.7e-94 348.2 174 89.1
Ca_15548_v3 Cicer arietinum L. HOM05D005492 ORTHO05D006911 6.3e-94 347.4 174 88.5
ECA232G4293 Erigeron canadensis HOM05D005492 ORTHO05D006911 6.3e-94 347.4 173 90.8
TPR.G12370 Trifolium pratense HOM05D005492 ORTHO05D006911 1.4e-93 346.3 174 88.5
Rhsim07G0214900 Rhododendron simsii HOM05D005492 ORTHO05D006911 9.1e-93 343.6 174 88.5
CDE04G0412 Ceratophyllum demersum HOM05D005492 ORTHO05D006911 1.2e-92 343.2 174 86.8
Atru.BG.248.p Acer truncatum HOM05D005492 ORTHO05D006911 5.0e-91 337.8 174 87.4
TAR381G0934 Trochodendron aralioides HOM05D005492 ORTHO05D006911 1.4e-90 336.3 174 87.9
HPP92_010753 Vanilla planifolia HOM05D005492 ORTHO05D006911 2.1e-89 332.4 174 84.5
Hund05232 Selenicereus undatus HOM05D005492 ORTHO05D006911 4.7e-89 331.3 243 67.9
SEGI_29138 Sequoiadendron giganteum HOM05D005492 ORTHO05D006911 4.7e-89 331.3 174 83.3
ATR0767G107 Amborella trichopoda HOM05D005492 ORTHO05D006911 6.3e-86 320.9 169 84.0
Zm00001eb010950 Zea mays HOM05D005492 ORTHO05D006911 6.3e-86 320.9 175 81.1
Os10g0205200 Oryza sativa ssp. japonica HOM05D005492 ORTHO05D006911 3.1e-85 318.5 175 80.0
Mapoly0013s0107 Marchantia polymorpha HOM05D005492 ORTHO05D006911 1.5e-82 309.7 176 78.4
ClCG11G014860 Citrullus lanatus HOM05D005492 ORTHO05D006911 4.7e-81 304.7 149 89.3
CBR_g37394 Chara braunii HOM05D005492 ORTHO05D006911 3.0e-80 302.0 173 76.9
Peaxi162Scf00626g00718 Petunia axillaris HOM05D005492 ORTHO05D006911 1.3e-78 296.6 180 78.9
Pp3c16_2350 Physcomitrium patens HOM05D005492 ORTHO05D006911 1.1e-77 293.5 174 73.0
PRCOL_00001807 Prasinoderma coloniale HOM05D005492 ORTHO05D006911 5.0e-75 284.6 165 73.3
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 5.7e-71 271.2 167 77.2
DCAR_009548 Daucus carota HOM05D005492 ORTHO05D006911 5.7e-71 271.2 132 91.7
Phvul.009G146200 Phaseolus vulgaris HOM05D005492 ORTHO05D006911 7.5e-71 270.8 131 91.6
TAR381G1662 Trochodendron aralioides HOM05D005492 ORTHO05D006911 3.1e-69 265.4 131 88.5
Cre02.g142350 Chlamydomonas reinhardtii HOM05D005492 ORTHO05D006911 7.7e-68 260.8 164 69.5
Atru.chr13.934 Acer truncatum HOM05D005492 ORTHO05D006911 1.4e-61 240.0 125 85.6
Duzib093G0511 Durio zibethinus HOM05D005492 ORTHO05D006911 3.3e-58 228.8 118 87.3
MELO3C003490.2 Cucumis melo HOM05D005492 ORTHO05D006911 4.3e-58 228.4 124 82.3
FvH4_5g33720 Fragaria vesca HOM05D005492 ORTHO05D006911 2.8e-57 225.7 112 90.2
THA.LOC104807850 Tarenaya hassleriana HOM05D005492 ORTHO05D006911 2.2e-54 216.1 125 78.4
MBI16_g14677_MAGBIO Magnolia biondii HOM05D005492 ORTHO05D006911 1.8e-53 213.0 114 86.0
Haze_27628 Corylus avellana HOM05D005492 ORTHO05D006911 9.2e-53 210.7 171 54.4
AagrBONN_evm.TU.Sc2ySwM_369.477 Anthoceros agrestis HOM05D005492 ORTHO05D006911 4.6e-52 208.4 112 79.5
Prupe.7G085600 Prunus persica HOM05D005492 ORTHO05D006911 3.3e-50 202.2 104 87.5
Nn2g14030 Nelumbo nucifera HOM05D005492 ORTHO05D006911 1.4e-45 186.8 141 65.2
CSS0004398 Camellia sinensis var. sinensis HOM05D005492 ORTHO05D006911 4.3e-42 175.3 95 83.2
MD08G1145300 Malus domestica HOM05D005492 ORTHO05D006911 6.4e-38 161.4 88 84.1
Dinv07042 Davidia involucrata HOM05D005492 ORTHO05D185078 7.3e-34 147.9 176 48.9
MD16G1251000 Malus domestica HOM05D005492 ORTHO05D245813 3.1e-32 142.5 109 63.3
MD05G1007500 Malus domestica HOM05D005492 ORTHO05D006911 7.6e-31 137.9 114 62.3
Nn5g29750 Nelumbo nucifera HOM05D005492 ORTHO05D006911 2.7e-28 129.4 65 87.7
MD00G1203800 Malus domestica HOM05D005492 ORTHO05D247194 7.6e-23 111.3 92 56.5


User provided reference genes

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