Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold28G11749 Striga asiatica HOM05D006637 ORTHO05D001736 7.9e-201 703.7 402 100.0
Migut.I00333 Erythranthe guttata HOM05D006637 ORTHO05D001736 2.1e-20 104.4 291 40.5
Oeu044877.1 Olea europaea HOM05D006637 ORTHO05D001736 1.1e-13 82.0 201 39.3
PGR083G0945 Punica granatum HOM05D006637 ORTHO05D001736 6.8e-11 72.8 267 31.5
Sed0021860 Sechium edule HOM05D006637 ORTHO05D001736 1.2e-10 72.0 216 33.8
CsaV3_1G002960 Cucumis sativus L. HOM05D006637 ORTHO05D001736 2.0e-10 71.2 217 34.6
Zm00001eb305470 Zea mays HOM05D003787 ORTHO05D001736 2.0e-10 71.2 215 33.5
CAN.G1228.21 Capsicum annuum HOM05D006637 ORTHO05D001736 3.4e-10 70.5 205 32.7
Sed0008450 Sechium edule HOM05D006637 ORTHO05D001736 3.4e-10 70.5 206 34.5
Manes.06G084300 Manihot esculenta HOM05D006637 ORTHO05D001736 5.8e-10 69.7 210 34.3
Actinidia04823 Actinidia chinensis HOM05D006637 ORTHO05D001736 9.9e-10 68.9 257 32.7
Manes.14G086000 Manihot esculenta HOM05D006637 ORTHO05D001736 9.9e-10 68.9 219 33.3
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 2.2e-09 67.8 206 36.4
PGSC0003DMG400024635 Solanum tuberosum HOM05D006637 ORTHO05D001736 2.9e-09 67.4 207 33.8
Lj5C102T22 Lonicera japonica HOM05D006637 ORTHO05D001736 8.3e-09 65.9 207 37.7
Nn3g17457 Nelumbo nucifera HOM05D003787 ORTHO05D001736 1.9e-08 64.7 240 32.9
Duzib068G0311 Durio zibethinus HOM05D006637 ORTHO05D001736 3.2e-08 63.9 234 32.1
Duzib205G1030 Durio zibethinus HOM05D006637 ORTHO05D001736 3.2e-08 63.9 232 31.9
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 4.1e-08 63.5 152 38.2
Gorai.008G199400 Gossypium raimondii HOM05D006637 ORTHO05D001736 4.1e-08 63.5 215 33.0
Thecc.03G102400 Theobroma cacao HOM05D006637 ORTHO05D001736 4.1e-08 63.5 224 33.9
GSVIVG01007850001 Vitis vinifera HOM05D006637 ORTHO05D001736 4.1e-08 63.5 210 33.3
CiPaw.11G054000 Carya illinoinensis HOM05D006637 ORTHO05D001736 5.4e-08 63.2 217 34.6
vmacro16493 Vaccinium macrocarpon HOM05D006637 ORTHO05D001736 5.4e-08 63.2 151 38.4
Dinv22776 Davidia involucrata HOM05D006637 ORTHO05D001736 7.1e-08 62.8 187 35.8
Gohir.D12G186000 Gossypium hirsutum HOM05D006637 ORTHO05D001736 9.2e-08 62.4 215 32.6
MELO3C017227.2 Cucumis melo HOM05D006637 ORTHO05D001736 1.6e-07 61.6 216 33.8
Dinv17418 Davidia involucrata HOM05D006637 ORTHO05D001736 2.1e-07 61.2 185 30.8
Gohir.A03G070200 Gossypium hirsutum HOM05D006637 ORTHO05D001736 2.1e-07 61.2 157 36.9
Gohir.D03G096675 Gossypium hirsutum HOM05D006637 ORTHO05D001736 2.1e-07 61.2 159 37.7
Potri.012G061700 Populus trichocarpa HOM05D006637 ORTHO05D001736 2.7e-07 60.8 234 31.2
Potri.015G057200 Populus trichocarpa HOM05D006637 ORTHO05D001736 2.7e-07 60.8 229 31.0
Prupe.5G205600 Prunus persica HOM05D006637 ORTHO05D001736 2.7e-07 60.8 268 31.3
Rhsim12G0148600 Rhododendron simsii HOM05D006637 ORTHO05D001736 4.6e-07 60.1 137 41.6
TWI81G0402 Tripterygium wilfordii HOM05D006637 ORTHO05D001736 4.6e-07 60.1 248 31.9
QL10p019649 Quercus lobata HOM05D006637 ORTHO05D001736 6.0e-07 59.7 189 33.3
FAN18G2922 Fragaria x ananassa HOM05D006637 ORTHO05D001736 7.8e-07 59.3 254 31.1
FvH4_5g13780 Fragaria vesca HOM05D006637 ORTHO05D001736 1.0e-06 58.9 254 31.1
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 1.0e-06 58.9 216 32.9
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 1.7e-06 58.2 182 35.2
Gohir.A12G182900 Gossypium hirsutum HOM05D006637 ORTHO05D001736 1.7e-06 58.2 215 33.5
Sopen03g034130 Solanum pennellii HOM05D006637 ORTHO05D001736 3.0e-06 57.4 205 30.7
Solyc03g115060.3 Solanum lycopersicum HOM05D006637 ORTHO05D001736 3.9e-06 57.0 205 30.2
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 5.1e-06 56.6 148 37.2
TAR629G2847 Trochodendron aralioides HOM05D003787 ORTHO05D001736 5.1e-06 56.6 216 33.3
MBI19_g14007_MAGBIO Magnolia biondii HOM05D006637 ORTHO05D001736 6.6e-06 56.2 196 32.1


User provided reference genes

Program Settings